RNA–Protein interactions for RNA: ENST00000396128.8

KLHL28-202, Transcript of kelch like family member 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHL28, Length 6,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28-202ENST00000396128 A0A087X002 238 aa3.46□□□□□ -1.86
KLHL28-202ENST00000396128 KRTAP4-16G5E9R7 235 aaPredicted RBP3.45□□□□□ -1.86
KLHL28-202ENST00000396128 SPTBN4Q9H254 2564 aa3.45□□□□□ -1.86
KLHL28-202ENST00000396128 USP9YO00507 2555 aaPredicted RBP3.44□□□□□ -1.86
KLHL28-202ENST00000396128 EP400Q96L91 3159 aa3.44□□□□□ -1.86
KLHL28-202ENST00000396128 C20orf166-AS1Q96NR2 134 aa3.43□□□□□ -1.86
KLHL28-202ENST00000396128 ACANP16112 2415 aa3.43□□□□□ -1.86
KLHL28-202ENST00000396128 MTORP42345 2549 aa3.42□□□□□ -1.86
KLHL28-202ENST00000396128 A8MUU9 505 aa3.42□□□□□ -1.86
KLHL28-202ENST00000396128 POLQO75417 2590 aa3.41□□□□□ -1.86
KLHL28-202ENST00000396128 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
KLHL28-202ENST00000396128 GOLGB1Q14789 3259 aaKnown RBP3.39□□□□□ -1.87
KLHL28-202ENST00000396128 Q5VV11 94 aa3.39□□□□□ -1.87
KLHL28-202ENST00000396128 KRTAP29-1A8MX34 341 aaPredicted RBP3.38□□□□□ -1.87
KLHL28-202ENST00000396128 KRTAP13-2Q52LG2 175 aa3.36□□□□□ -1.87
KLHL28-202ENST00000396128 HECTD1Q9ULT8 2610 aa3.36□□□□□ -1.87
KLHL28-202ENST00000396128 KRTAP13-1Q8IUC0 172 aa3.35□□□□□ -1.87
KLHL28-202ENST00000396128 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
KLHL28-202ENST00000396128 TNP1P09430 55 aa3.34□□□□□ -1.87
KLHL28-202ENST00000396128 NOTCH2NLQ7Z3S9 236 aa3.34□□□□□ -1.87
KLHL28-202ENST00000396128 EPG5Q9HCE0 2579 aa3.33□□□□□ -1.88
KLHL28-202ENST00000396128 SETD2Q9BYW2 2564 aaPredicted RBP3.33□□□□□ -1.88
KLHL28-202ENST00000396128 KRTAP11-1Q8IUC1 163 aa3.31□□□□□ -1.88
KLHL28-202ENST00000396128 TPRXLQ17RH7 258 aa3.3□□□□□ -1.88
KLHL28-202ENST00000396128 UTRNP46939 3433 aa3.3□□□□□ -1.88
KLHL28-202ENST00000396128 HELZ2Q9BYK8 2649 aaKnown RBP3.29□□□□□ -1.88
KLHL28-202ENST00000396128 FLNAP21333 2647 aaKnown RBP3.29□□□□□ -1.88
KLHL28-202ENST00000396128 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.88
KLHL28-202ENST00000396128 ITPR3Q14573 2671 aa3.28□□□□□ -1.88
KLHL28-202ENST00000396128 KRTAP7-1Q8IUC3 87 aa3.27□□□□□ -1.89
KLHL28-202ENST00000396128 A8MU10 97 aa3.27□□□□□ -1.89
KLHL28-202ENST00000396128 WDR87Q6ZQQ6 2873 aa3.27□□□□□ -1.89
KLHL28-202ENST00000396128 PCNTO95613 3336 aa3.26□□□□□ -1.89
KLHL28-202ENST00000396128 XP32Q5T750 250 aa3.26□□□□□ -1.89
KLHL28-202ENST00000396128 MGAM2Q2M2H8 2515 aa3.26□□□□□ -1.89
KLHL28-202ENST00000396128 A6NN06 94 aa3.25□□□□□ -1.89
KLHL28-202ENST00000396128 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
KLHL28-202ENST00000396128 USP34Q70CQ2 3546 aa3.24□□□□□ -1.89
KLHL28-202ENST00000396128 FLNBO75369 2602 aaKnown RBP3.24□□□□□ -1.89
KLHL28-202ENST00000396128 KRTAP10-8P60410 259 aa3.23□□□□□ -1.89
KLHL28-202ENST00000396128 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
KLHL28-202ENST00000396128 KRTAP10-10P60014 251 aa3.22□□□□□ -1.89
KLHL28-202ENST00000396128 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.89
KLHL28-202ENST00000396128 KRTAP1-4P0C5Y4 121 aa3.2□□□□□ -1.9
KLHL28-202ENST00000396128 A0A1B0GVY2 172 aa3.19□□□□□ -1.9
KLHL28-202ENST00000396128 SRCAPQ6ZRS2 3230 aa3.18□□□□□ -1.9
KLHL28-202ENST00000396128 ATRQ13535 2644 aa3.18□□□□□ -1.9
KLHL28-202ENST00000396128 CENPFP49454 3210 aa3.18□□□□□ -1.9
KLHL28-202ENST00000396128 MAST4O15021 2626 aa3.18□□□□□ -1.9
KLHL28-202ENST00000396128 KRTAP13-3Q3SY46 172 aa3.15□□□□□ -1.9
KLHL28-202ENST00000396128 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.9
KLHL28-202ENST00000396128 USP24Q9UPU5 2620 aa3.15□□□□□ -1.91
KLHL28-202ENST00000396128 KMT2BQ9UMN6 2715 aaPredicted RBP3.15□□□□□ -1.91
KLHL28-202ENST00000396128 CFAP46Q8IYW2 2715 aa3.14□□□□□ -1.91
KLHL28-202ENST00000396128 BAHCC1Q9P281 2608 aa3.13□□□□□ -1.91
KLHL28-202ENST00000396128 LAMA3Q16787 3333 aa3.11□□□□□ -1.91
KLHL28-202ENST00000396128 STAB1Q9NY15 2570 aa3.08□□□□□ -1.92
KLHL28-202ENST00000396128 XIRP2A4UGR9 3374 aa3.07□□□□□ -1.92
KLHL28-202ENST00000396128 BRCA2P51587 3418 aa3.06□□□□□ -1.92
KLHL28-202ENST00000396128 VCANP13611 3396 aa3.06□□□□□ -1.92
KLHL28-202ENST00000396128 LAMA2P24043 3122 aaKnown RBP3.06□□□□□ -1.92
KLHL28-202ENST00000396128 ZFHX4Q86UP3 3567 aa3.06□□□□□ -1.92
KLHL28-202ENST00000396128 BPTFQ12830 3046 aa3.05□□□□□ -1.92
KLHL28-202ENST00000396128 CEP350Q5VT06 3117 aa3.04□□□□□ -1.92
KLHL28-202ENST00000396128 UNC79Q9P2D8 2635 aa3.03□□□□□ -1.92
KLHL28-202ENST00000396128 P0C880 135 aa3.03□□□□□ -1.92
KLHL28-202ENST00000396128 TEP1Q99973 2627 aaKnown RBP3.02□□□□□ -1.93
KLHL28-202ENST00000396128 DMBT1Q9UGM3 2413 aaPredicted RBP3.01□□□□□ -1.93
KLHL28-202ENST00000396128 NBEAL1Q6ZS30 2694 aa3□□□□□ -1.93
KLHL28-202ENST00000396128 TEX15Q9BXT5 2789 aa3□□□□□ -1.93
KLHL28-202ENST00000396128 COL6A5A8TX70 2615 aa2.99□□□□□ -1.93
KLHL28-202ENST00000396128 FLG2Q5D862 2391 aaPredicted RBP2.98□□□□□ -1.93
KLHL28-202ENST00000396128 IGSF10Q6WRI0 2623 aa2.98□□□□□ -1.93
KLHL28-202ENST00000396128 H0YAA0 97 aa2.98□□□□□ -1.93
KLHL28-202ENST00000396128 ITPR2Q14571 2701 aa2.98□□□□□ -1.93
KLHL28-202ENST00000396128 ZNF292O60281 2723 aa2.98□□□□□ -1.93
KLHL28-202ENST00000396128 NSD1Q96L73 2696 aaPredicted RBP2.97□□□□□ -1.93
KLHL28-202ENST00000396128 KRTAP17-1Q9BYP8 105 aa2.95□□□□□ -1.94
KLHL28-202ENST00000396128 DNAH12Q6ZR08 3092 aa2.95□□□□□ -1.94
KLHL28-202ENST00000396128 CHD9Q3L8U1 2897 aa2.94□□□□□ -1.94
KLHL28-202ENST00000396128 WDFY3Q8IZQ1 3526 aa2.94□□□□□ -1.94
KLHL28-202ENST00000396128 CDH23Q9H251 3354 aa2.93□□□□□ -1.94
KLHL28-202ENST00000396128 CENPEQ02224 2701 aa2.93□□□□□ -1.94
KLHL28-202ENST00000396128 UNC80Q8N2C7 3258 aa2.93□□□□□ -1.94
KLHL28-202ENST00000396128 MYO15AQ9UKN7 3530 aa2.93□□□□□ -1.94
KLHL28-202ENST00000396128 CHD7Q9P2D1 2997 aa2.93□□□□□ -1.94
KLHL28-202ENST00000396128 SETXQ7Z333 2677 aaKnown RBP2.92□□□□□ -1.94
KLHL28-202ENST00000396128 AKAP13Q12802 2813 aa2.91□□□□□ -1.94
KLHL28-202ENST00000396128 KRTAP13-4Q3LI77 160 aa2.91□□□□□ -1.94
KLHL28-202ENST00000396128 CFAP54Q96N23 3096 aa2.9□□□□□ -1.94
KLHL28-202ENST00000396128 SPEGQ15772 3267 aa2.9□□□□□ -1.94
KLHL28-202ENST00000396128 GCN1Q92616 2671 aaKnown RBP2.89□□□□□ -1.95
KLHL28-202ENST00000396128 MAP1AP78559 2803 aaPredicted RBP2.89□□□□□ -1.95
KLHL28-202ENST00000396128 CHD6Q8TD26 2715 aa2.89□□□□□ -1.95
KLHL28-202ENST00000396128 DNAH14Q0VDD8 3507 aa2.89□□□□□ -1.95
KLHL28-202ENST00000396128 TRANK1O15050 2925 aa2.88□□□□□ -1.95
KLHL28-202ENST00000396128 A0A0C4DFX4 3053 aa2.88□□□□□ -1.95
KLHL28-202ENST00000396128 C5orf42Q9H799 3197 aa2.88□□□□□ -1.95
KLHL28-202ENST00000396128 RANBP2P49792 3224 aaKnown RBP2.87□□□□□ -1.95
KLHL28-202ENST00000396128 MKI67P46013 3256 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms