RNA–Protein interactions for RNA: ENST00000395603.7

ATRX-202, Transcript of ATRX, chromatin remodeler, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRX, Length 10,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-202ENST00000395603 A0A1W2PNM2 257 aa3.31□□□□□ -1.88
ATRX-202ENST00000395603 DSCR10P59022 87 aa3.31□□□□□ -1.88
ATRX-202ENST00000395603 NBEAL1Q6ZS30 2694 aa3.31□□□□□ -1.88
ATRX-202ENST00000395603 IGKV2D-30A0A075B6S6 120 aa3.31□□□□□ -1.88
ATRX-202ENST00000395603 C9orf129Q5T035 196 aaKnown RBP3.31□□□□□ -1.88
ATRX-202ENST00000395603 FREM2Q5SZK8 3169 aa3.31□□□□□ -1.88
ATRX-202ENST00000395603 IGKV2-30P06310 120 aa3.31□□□□□ -1.88
ATRX-202ENST00000395603 FLNBO75369 2602 aaKnown RBP3.3□□□□□ -1.88
ATRX-202ENST00000395603 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
ATRX-202ENST00000395603 CFAP54Q96N23 3096 aa3.3□□□□□ -1.88
ATRX-202ENST00000395603 GIG44P09565 113 aaPredicted RBP3.3□□□□□ -1.88
ATRX-202ENST00000395603 C4orf26Q17RF5 130 aa3.3□□□□□ -1.88
ATRX-202ENST00000395603 MMP24-AS1A0A0U1RRL7 71 aa3.3□□□□□ -1.88
ATRX-202ENST00000395603 APLNQ9ULZ1 77 aa3.3□□□□□ -1.88
ATRX-202ENST00000395603 LAMA1P25391 3075 aa3.3□□□□□ -1.88
ATRX-202ENST00000395603 PRLHP81277 87 aa3.3□□□□□ -1.88
ATRX-202ENST00000395603 C9orf92A6NGG3 77 aa3.3□□□□□ -1.88
ATRX-202ENST00000395603 DEFB104AQ8WTQ1 72 aa3.29□□□□□ -1.88
ATRX-202ENST00000395603 KRTAP4-16G5E9R7 235 aaPredicted RBP3.29□□□□□ -1.88
ATRX-202ENST00000395603 KRTAP29-1A8MX34 341 aaPredicted RBP3.28□□□□□ -1.88
ATRX-202ENST00000395603 A0A096LNI7 61 aa3.28□□□□□ -1.88
ATRX-202ENST00000395603 A6NN06 94 aa3.28□□□□□ -1.88
ATRX-202ENST00000395603 PRB3Q04118 309 aaPredicted RBP3.28□□□□□ -1.89
ATRX-202ENST00000395603 ROMO1P60602 79 aa3.27□□□□□ -1.89
ATRX-202ENST00000395603 DEFB116Q30KQ4 102 aa3.27□□□□□ -1.89
ATRX-202ENST00000395603 FRYQ5TBA9 3013 aa3.27□□□□□ -1.89
ATRX-202ENST00000395603 COL6A5A8TX70 2615 aa3.27□□□□□ -1.89
ATRX-202ENST00000395603 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.26□□□□□ -1.89
ATRX-202ENST00000395603 PCOTHQ58A44 107 aa3.26□□□□□ -1.89
ATRX-202ENST00000395603 PRR3P79522 188 aaKnown RBP3.26□□□□□ -1.89
ATRX-202ENST00000395603 A0A1W2PPR1 153 aa3.26□□□□□ -1.89
ATRX-202ENST00000395603 DMDP11532 3685 aa3.26□□□□□ -1.89
ATRX-202ENST00000395603 ITPR3Q14573 2671 aa3.26□□□□□ -1.89
ATRX-202ENST00000395603 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
ATRX-202ENST00000395603 MAPK1IP1LQ8NDC0 245 aa3.25□□□□□ -1.89
ATRX-202ENST00000395603 TEP1Q99973 2627 aaKnown RBP3.25□□□□□ -1.89
ATRX-202ENST00000395603 AKAP13Q12802 2813 aa3.25□□□□□ -1.89
ATRX-202ENST00000395603 ZNF292O60281 2723 aa3.24□□□□□ -1.89
ATRX-202ENST00000395603 MAP1AP78559 2803 aaPredicted RBP3.24□□□□□ -1.89
ATRX-202ENST00000395603 Q96NJ1 140 aa3.24□□□□□ -1.89
ATRX-202ENST00000395603 DMXL1Q9Y485 3027 aa3.24□□□□□ -1.89
ATRX-202ENST00000395603 DEFB1P60022 68 aa3.23□□□□□ -1.89
ATRX-202ENST00000395603 KRTAP10-9P60411 292 aa3.22□□□□□ -1.89
ATRX-202ENST00000395603 CYSTM1Q9H1C7 97 aa3.22□□□□□ -1.89
ATRX-202ENST00000395603 ASPMQ8IZT6 3477 aa3.21□□□□□ -1.9
ATRX-202ENST00000395603 MGAQ8IWI9 3026 aa3.2□□□□□ -1.9
ATRX-202ENST00000395603 DEFB4AO15263 64 aa3.2□□□□□ -1.9
ATRX-202ENST00000395603 KRTAP19-4Q3LI73 84 aa3.2□□□□□ -1.9
ATRX-202ENST00000395603 ADM2Q7Z4H4 148 aa3.2□□□□□ -1.9
ATRX-202ENST00000395603 C10orf99Q6UWK7 81 aa3.2□□□□□ -1.9
ATRX-202ENST00000395603 DMBT1Q9UGM3 2413 aaPredicted RBP3.19□□□□□ -1.9
ATRX-202ENST00000395603 DCHS1Q96JQ0 3298 aa3.19□□□□□ -1.9
ATRX-202ENST00000395603 H0YAA0 97 aa3.19□□□□□ -1.9
ATRX-202ENST00000395603 Q6ZSA8 131 aa3.18□□□□□ -1.9
ATRX-202ENST00000395603 PANO1I0J062 215 aa3.18□□□□□ -1.9
ATRX-202ENST00000395603 KRTAP25-1Q3LHN0 102 aa3.18□□□□□ -1.9
ATRX-202ENST00000395603 LRCOL1A6NCL2 159 aa3.18□□□□□ -1.9
ATRX-202ENST00000395603 KRTAP26-1Q6PEX3 210 aa3.18□□□□□ -1.9
ATRX-202ENST00000395603 STAB2Q8WWQ8 2551 aa3.18□□□□□ -1.9
ATRX-202ENST00000395603 K7EIL1 84 aa3.17□□□□□ -1.9
ATRX-202ENST00000395603 H1FX-AS1Q4G0G2 97 aa3.17□□□□□ -1.9
ATRX-202ENST00000395603 Q5W150 140 aa3.17□□□□□ -1.9
ATRX-202ENST00000395603 SETXQ7Z333 2677 aaKnown RBP3.17□□□□□ -1.9
ATRX-202ENST00000395603 DMXL2Q8TDJ6 3036 aa3.17□□□□□ -1.9
ATRX-202ENST00000395603 DSPP15924 2871 aaKnown RBP3.17□□□□□ -1.9
ATRX-202ENST00000395603 ZZEF1O43149 2961 aa3.17□□□□□ -1.9
ATRX-202ENST00000395603 NIPBLQ6KC79 2804 aaeCLIP3.17□□□□□ -1.92e-6■■■■□ 19.3
ATRX-202ENST00000395603 NOTCH1P46531 2555 aa3.16□□□□□ -1.9
ATRX-202ENST00000395603 PRR4Q16378 134 aa3.16□□□□□ -1.9
ATRX-202ENST00000395603 KRTAP23-1A1A580 65 aa3.16□□□□□ -1.9
ATRX-202ENST00000395603 KRTAP24-1Q3LI83 254 aa3.16□□□□□ -1.9
ATRX-202ENST00000395603 S4R3F8 94 aa3.16□□□□□ -1.9
ATRX-202ENST00000395603 BOD1L1Q8NFC6 3051 aa3.15□□□□□ -1.9
ATRX-202ENST00000395603 CFAP47Q6ZTR5 3102 aa3.15□□□□□ -1.9
ATRX-202ENST00000395603 A8MUU9 505 aa3.15□□□□□ -1.9
ATRX-202ENST00000395603 LOC400499M0QZD8 3231 aa3.15□□□□□ -1.91
ATRX-202ENST00000395603 TNP1P09430 55 aa3.15□□□□□ -1.91
ATRX-202ENST00000395603 CFAP46Q8IYW2 2715 aa3.15□□□□□ -1.91
ATRX-202ENST00000395603 KRTAP13-1Q8IUC0 172 aa3.15□□□□□ -1.91
ATRX-202ENST00000395603 C20orf166-AS1Q96NR2 134 aa3.14□□□□□ -1.91
ATRX-202ENST00000395603 SMR3AQ99954 134 aa3.14□□□□□ -1.91
ATRX-202ENST00000395603 WDFY3Q8IZQ1 3526 aa3.14□□□□□ -1.91
ATRX-202ENST00000395603 KRTAP1-1Q07627 177 aa3.13□□□□□ -1.91
ATRX-202ENST00000395603 KRTAP1-3Q8IUG1 177 aa3.13□□□□□ -1.91
ATRX-202ENST00000395603 R4GN34 69 aa3.12□□□□□ -1.91
ATRX-202ENST00000395603 PRB4P10163 310 aaPredicted RBP3.12□□□□□ -1.91
ATRX-202ENST00000395603 ATMQ13315 3056 aa3.12□□□□□ -1.91
ATRX-202ENST00000395603 LAMA5O15230 3695 aa3.12□□□□□ -1.91
ATRX-202ENST00000395603 KRTAP16-1A8MUX0 517 aa3.11□□□□□ -1.91
ATRX-202ENST00000395603 ZFHX4Q86UP3 3567 aa3.11□□□□□ -1.91
ATRX-202ENST00000395603 J3QL48 77 aa3.1□□□□□ -1.91
ATRX-202ENST00000395603 RELNP78509 3460 aa3.1□□□□□ -1.91
ATRX-202ENST00000395603 ITPR1Q14643 2758 aa3.09□□□□□ -1.91
ATRX-202ENST00000395603 CASC10Q5T4H9 136 aa3.09□□□□□ -1.91
ATRX-202ENST00000395603 SPINK7P58062 85 aa3.09□□□□□ -1.91
ATRX-202ENST00000395603 PRRC2CQ9Y520 2896 aaKnown RBP3.09□□□□□ -1.92
ATRX-202ENST00000395603 KALRNO60229 2985 aa3.08□□□□□ -1.92
ATRX-202ENST00000395603 IGSF10Q6WRI0 2623 aa3.08□□□□□ -1.92
ATRX-202ENST00000395603 A0A1W2PNN7 141 aa3.08□□□□□ -1.92
ATRX-202ENST00000395603 ITPR2Q14571 2701 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms