RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 DEFB105AQ8NG35 78 aa8.38□□□□□ -1.07
SNCA-205ENST00000394991 HIST1H4GQ99525 98 aa8.38□□□□□ -1.07
SNCA-205ENST00000394991 SPRR1BP22528 89 aa8.37□□□□□ -1.07
SNCA-205ENST00000394991 SLC25A34Q6PIV7 304 aa8.37□□□□□ -1.07
SNCA-205ENST00000394991 SMIM11BQ8TCY0 68 aa8.37□□□□□ -1.07
SNCA-205ENST00000394991 PAM16Q9Y3D7 125 aa8.37□□□□□ -1.07
SNCA-205ENST00000394991 SSPOA2VEC9 5147 aa8.36□□□□□ -1.07
SNCA-205ENST00000394991 SPATA45Q537H7 98 aa8.36□□□□□ -1.07
SNCA-205ENST00000394991 C14orf144Q96I85 54 aa8.36□□□□□ -1.07
SNCA-205ENST00000394991 C12orf57Q99622 126 aa8.35□□□□□ -1.07
SNCA-205ENST00000394991 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
SNCA-205ENST00000394991 VAMP8Q9BV40 100 aa8.34□□□□□ -1.07
SNCA-205ENST00000394991 DLEU1O43261 78 aa8.33□□□□□ -1.08
SNCA-205ENST00000394991 VAMP3Q15836 100 aa8.33□□□□□ -1.08
SNCA-205ENST00000394991 TEX49A0A1B0GTD5 131 aa8.32□□□□□ -1.08
SNCA-205ENST00000394991 Q1RN00 199 aa8.32□□□□□ -1.08
SNCA-205ENST00000394991 USH2AO75445 5202 aa8.31□□□□□ -1.08
SNCA-205ENST00000394991 H7C2G1 150 aa8.31□□□□□ -1.08
SNCA-205ENST00000394991 C1orf195Q5TG92 126 aa8.31□□□□□ -1.08
SNCA-205ENST00000394991 NHP2Q9NX24 153 aaKnown RBP8.31□□□□□ -1.08
SNCA-205ENST00000394991 CD164Q04900 197 aa8.3□□□□□ -1.08
SNCA-205ENST00000394991 TMA7Q9Y2S6 64 aaKnown RBP8.3□□□□□ -1.08
SNCA-205ENST00000394991 Q5XG85 94 aa8.28□□□□□ -1.08
SNCA-205ENST00000394991 HIGD1BQ9P298 99 aa8.28□□□□□ -1.08
SNCA-205ENST00000394991 IGLV5-48A0A075B6I7 105 aa8.27□□□□□ -1.09
SNCA-205ENST00000394991 LINC00575Q6W349 94 aa8.26□□□□□ -1.09
SNCA-205ENST00000394991 SMIM29Q86T20 159 aa8.26□□□□□ -1.09
SNCA-205ENST00000394991 RAB37Q96AX2 223 aa8.26□□□□□ -1.09
SNCA-205ENST00000394991 KRTAP9-8Q9BYQ0 159 aa8.26□□□□□ -1.09
SNCA-205ENST00000394991 PRO1933Q9H354 126 aa8.26□□□□□ -1.09
SNCA-205ENST00000394991 hADV29S1A0JD25 119 aa8.25□□□□□ -1.09
SNCA-205ENST00000394991 C2orf91Q6ZV80 131 aa8.25□□□□□ -1.09
SNCA-205ENST00000394991 CFC1P0CG37 223 aa8.24□□□□□ -1.09
SNCA-205ENST00000394991 PYY3Q5JQD4 70 aa8.24□□□□□ -1.09
SNCA-205ENST00000394991 A0A0G2JQZ4 141 aa8.23□□□□□ -1.09
SNCA-205ENST00000394991 BVES-AS1Q5T3Y7 98 aa8.23□□□□□ -1.09
SNCA-205ENST00000394991 Q6Q795 121 aa8.23□□□□□ -1.09
SNCA-205ENST00000394991 FCGBPQ9Y6R7 5405 aaPredicted RBP8.23□□□□□ -1.09
SNCA-205ENST00000394991 Q6ZQY7 126 aa8.22□□□□□ -1.09
SNCA-205ENST00000394991 CEND1Q8N111 149 aa8.21□□□□□ -1.1
SNCA-205ENST00000394991 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
SNCA-205ENST00000394991 F8WEM9 126 aa8.2□□□□□ -1.1
SNCA-205ENST00000394991 TMEM238LA0A1B0GVL6 79 aa8.18□□□□□ -1.1
SNCA-205ENST00000394991 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.17□□□□□ -1.1
SNCA-205ENST00000394991 FXYD2P54710 66 aa8.16□□□□□ -1.1
SNCA-205ENST00000394991 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
SNCA-205ENST00000394991 PRO1854Q9UHT4 67 aa8.16□□□□□ -1.1
SNCA-205ENST00000394991 SNCGO76070 127 aa8.15□□□□□ -1.1
SNCA-205ENST00000394991 H0YGX0 51 aa8.14□□□□□ -1.11
SNCA-205ENST00000394991 SNHG12Q9BXW3 62 aa8.14□□□□□ -1.11
SNCA-205ENST00000394991 HSD52Q0P140 79 aa8.13□□□□□ -1.11
SNCA-205ENST00000394991 OCIAD2Q56VL3 154 aa8.12□□□□□ -1.11
SNCA-205ENST00000394991 KRTAP4-8Q9BYQ9 185 aa8.12□□□□□ -1.11
SNCA-205ENST00000394991 Q6JHZ5 121 aa8.11□□□□□ -1.11
SNCA-205ENST00000394991 PPDPFLQ8WWR9 84 aa8.11□□□□□ -1.11
SNCA-205ENST00000394991 FAM218AQ96MZ4 157 aa8.11□□□□□ -1.11
SNCA-205ENST00000394991 UQCR10Q9UDW1 63 aa8.11□□□□□ -1.11
SNCA-205ENST00000394991 MT2AP02795 61 aa8.1□□□□□ -1.11
SNCA-205ENST00000394991 TCL1BO95988 128 aa8.09□□□□□ -1.11
SNCA-205ENST00000394991 IGFL1Q6UW32 110 aa8.09□□□□□ -1.11
SNCA-205ENST00000394991 ATP11AUNQ6ZP68 121 aa8.09□□□□□ -1.11
SNCA-205ENST00000394991 Q75L30 129 aa8.09□□□□□ -1.11
SNCA-205ENST00000394991 MACF1Q9UPN3 7388 aaKnown RBP8.08□□□□□ -1.12
SNCA-205ENST00000394991 K7ERJ3 54 aa8.08□□□□□ -1.12
SNCA-205ENST00000394991 CLEC2BQ92478 149 aa8.08□□□□□ -1.12
SNCA-205ENST00000394991 H3BUT2 72 aa8.07□□□□□ -1.12
SNCA-205ENST00000394991 TRIAP1O43715 76 aa8.07□□□□□ -1.12
SNCA-205ENST00000394991 PSMB2P49721 201 aa8.07□□□□□ -1.12
SNCA-205ENST00000394991 SYNE2Q8WXH0 6885 aaKnown RBP8.06□□□□□ -1.12
SNCA-205ENST00000394991 OBSCN-AS1Q96MR7 158 aa8.06□□□□□ -1.12
SNCA-205ENST00000394991 TRBV7-7A0A0K0K1E9 115 aa8.04□□□□□ -1.12
SNCA-205ENST00000394991 A0A1B0GX51 115 aa8.04□□□□□ -1.12
SNCA-205ENST00000394991 MT1FP04733 61 aa8.04□□□□□ -1.12
SNCA-205ENST00000394991 FABP2P12104 132 aa8.04□□□□□ -1.12
SNCA-205ENST00000394991 NDUFV3P56181 108 aaKnown RBP8.04□□□□□ -1.12
SNCA-205ENST00000394991 GHRHP01286 108 aa8.02□□□□□ -1.13
SNCA-205ENST00000394991 COX6CP09669 75 aa8.02□□□□□ -1.13
SNCA-205ENST00000394991 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
SNCA-205ENST00000394991 DNAL4O96015 105 aa8□□□□□ -1.13
SNCA-205ENST00000394991 H3BMG7 143 aa7.99□□□□□ -1.13
SNCA-205ENST00000394991 ORMDL1Q9P0S3 153 aa7.98□□□□□ -1.13
SNCA-205ENST00000394991 SCGB1C2P0DMR2 95 aa7.96□□□□□ -1.14
SNCA-205ENST00000394991 A0A1B0GV72 72 aa7.95□□□□□ -1.14
SNCA-205ENST00000394991 LST1O00453 97 aa7.95□□□□□ -1.14
SNCA-205ENST00000394991 TEN1Q86WV5 123 aa7.95□□□□□ -1.14
SNCA-205ENST00000394991 Q96NJ1 140 aa7.95□□□□□ -1.14
SNCA-205ENST00000394991 SMIM6P0DI80 62 aa7.94□□□□□ -1.14
SNCA-205ENST00000394991 TRBV20-1A0A075B6N2 111 aa7.93□□□□□ -1.14
SNCA-205ENST00000394991 H3BQ85 93 aa7.93□□□□□ -1.14
SNCA-205ENST00000394991 KRTAP10-10P60014 251 aa7.93□□□□□ -1.14
SNCA-205ENST00000394991 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
SNCA-205ENST00000394991 SS18L2Q9UHA2 77 aa7.93□□□□□ -1.14
SNCA-205ENST00000394991 TMEM256-PLSCR3K7ERE1 68 aa7.92□□□□□ -1.14
SNCA-205ENST00000394991 A0A087WSZ3 146 aa7.91□□□□□ -1.14
SNCA-205ENST00000394991 A8MUU9 505 aa7.91□□□□□ -1.14
SNCA-205ENST00000394991 M0R143 59 aa7.91□□□□□ -1.14
SNCA-205ENST00000394991 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
SNCA-205ENST00000394991 A0A1W2PNM2 257 aa7.89□□□□□ -1.15
SNCA-205ENST00000394991 TRACP01848 142 aa7.89□□□□□ -1.15
SNCA-205ENST00000394991 KRTAP19-6Q3LI70 58 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms