RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 RAB37Q96AX2 223 aa10.78□□□□□ -0.68
UPK3B-203ENST00000394849 LAMTOR3Q9UHA4 124 aa10.78□□□□□ -0.68
UPK3B-203ENST00000394849 PCOTHQ58A44 107 aa10.76□□□□□ -0.69
UPK3B-203ENST00000394849 TEX49A0A1B0GTD5 131 aa10.75□□□□□ -0.69
UPK3B-203ENST00000394849 H7C2G1 150 aa10.75□□□□□ -0.69
UPK3B-203ENST00000394849 CFC1P0CG37 223 aa10.75□□□□□ -0.69
UPK3B-203ENST00000394849 CEND1Q8N111 149 aa10.75□□□□□ -0.69
UPK3B-203ENST00000394849 TMEM238LA0A1B0GVL6 79 aa10.74□□□□□ -0.69
UPK3B-203ENST00000394849 A6NJY4 79 aa10.74□□□□□ -0.69
UPK3B-203ENST00000394849 A0A0B4J2C4 111 aa10.73□□□□□ -0.69
UPK3B-203ENST00000394849 Q1RN00 199 aa10.73□□□□□ -0.69
UPK3B-203ENST00000394849 BVES-AS1Q5T3Y7 98 aa10.73□□□□□ -0.69
UPK3B-203ENST00000394849 LINC00575Q6W349 94 aa10.72□□□□□ -0.69
UPK3B-203ENST00000394849 M0R2T5 61 aa10.71□□□□□ -0.69
UPK3B-203ENST00000394849 IGLV5-48A0A075B6I7 105 aa10.7□□□□□ -0.7
UPK3B-203ENST00000394849 hADV29S1A0JD25 119 aa10.7□□□□□ -0.7
UPK3B-203ENST00000394849 LIMD2Q9BT23 127 aa10.7□□□□□ -0.7
UPK3B-203ENST00000394849 UQCR10Q9UDW1 63 aa10.7□□□□□ -0.7
UPK3B-203ENST00000394849 FXYD2P54710 66 aa10.69□□□□□ -0.7
UPK3B-203ENST00000394849 HSD52Q0P140 79 aa10.69□□□□□ -0.7
UPK3B-203ENST00000394849 Q6ZQY7 126 aa10.66□□□□□ -0.7
UPK3B-203ENST00000394849 PRO1854Q9UHT4 67 aa10.66□□□□□ -0.7
UPK3B-203ENST00000394849 SMIM29Q86T20 159 aa10.65□□□□□ -0.7
UPK3B-203ENST00000394849 PRO1933Q9H354 126 aa10.65□□□□□ -0.7
UPK3B-203ENST00000394849 SNCGO76070 127 aa10.63□□□□□ -0.71
UPK3B-203ENST00000394849 HRCT1Q6UXD1 115 aa10.63□□□□□ -0.71
UPK3B-203ENST00000394849 C9orf92A6NGG3 77 aa10.62□□□□□ -0.71
UPK3B-203ENST00000394849 F8WEM9 126 aa10.62□□□□□ -0.71
UPK3B-203ENST00000394849 H0YGX0 51 aa10.62□□□□□ -0.71
UPK3B-203ENST00000394849 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.62□□□□□ -0.71
UPK3B-203ENST00000394849 COX6B2Q6YFQ2 88 aa10.61□□□□□ -0.71
UPK3B-203ENST00000394849 KRTAP9-7A8MTY7 169 aa10.6□□□□□ -0.71
UPK3B-203ENST00000394849 K7ERJ3 54 aa10.56□□□□□ -0.72
UPK3B-203ENST00000394849 SMIM6P0DI80 62 aa10.56□□□□□ -0.72
UPK3B-203ENST00000394849 CD164Q04900 197 aa10.56□□□□□ -0.72
UPK3B-203ENST00000394849 PPDPFLQ8WWR9 84 aa10.56□□□□□ -0.72
UPK3B-203ENST00000394849 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.55□□□□□ -0.72
UPK3B-203ENST00000394849 SNHG12Q9BXW3 62 aa10.55□□□□□ -0.72
UPK3B-203ENST00000394849 TRIAP1O43715 76 aa10.54□□□□□ -0.72
UPK3B-203ENST00000394849 PSMB2P49721 201 aa10.54□□□□□ -0.72
UPK3B-203ENST00000394849 FAM218AQ96MZ4 157 aa10.54□□□□□ -0.72
UPK3B-203ENST00000394849 A0A0G2JQZ4 141 aa10.53□□□□□ -0.72
UPK3B-203ENST00000394849 OCIAD2Q56VL3 154 aa10.53□□□□□ -0.72
UPK3B-203ENST00000394849 A0A1B0GX51 115 aa10.52□□□□□ -0.73
UPK3B-203ENST00000394849 FLGP20930 4061 aaPredicted RBP10.52□□□□□ -0.73
UPK3B-203ENST00000394849 COX6CP09669 75 aa10.5□□□□□ -0.73
UPK3B-203ENST00000394849 Q6JHZ5 121 aa10.5□□□□□ -0.73
UPK3B-203ENST00000394849 GHRHP01286 108 aa10.49□□□□□ -0.73
UPK3B-203ENST00000394849 RPL37P61927 97 aaKnown RBP10.49□□□□□ -0.73
UPK3B-203ENST00000394849 CLEC2BQ92478 149 aa10.48□□□□□ -0.73
UPK3B-203ENST00000394849 DNAL4O96015 105 aa10.46□□□□□ -0.73
UPK3B-203ENST00000394849 Q5XG85 94 aa10.46□□□□□ -0.73
UPK3B-203ENST00000394849 M0R143 59 aa10.45□□□□□ -0.74
UPK3B-203ENST00000394849 IGFL1Q6UW32 110 aa10.45□□□□□ -0.74
UPK3B-203ENST00000394849 FABP2P12104 132 aa10.44□□□□□ -0.74
UPK3B-203ENST00000394849 LOC105371267A0A1B0GV96 52 aa10.43□□□□□ -0.74
UPK3B-203ENST00000394849 TSTD3H0UI37 97 aa10.43□□□□□ -0.74
UPK3B-203ENST00000394849 H3BUT2 72 aa10.43□□□□□ -0.74
UPK3B-203ENST00000394849 NDUFV3P56181 108 aaKnown RBP10.43□□□□□ -0.74
UPK3B-203ENST00000394849 TCL1BO95988 128 aa10.42□□□□□ -0.74
UPK3B-203ENST00000394849 SCGB1C2P0DMR2 95 aa10.42□□□□□ -0.74
UPK3B-203ENST00000394849 ORMDL1Q9P0S3 153 aa10.4□□□□□ -0.74
UPK3B-203ENST00000394849 C1orf195Q5TG92 126 aa10.39□□□□□ -0.75
UPK3B-203ENST00000394849 TRBV7-7A0A0K0K1E9 115 aa10.38□□□□□ -0.75
UPK3B-203ENST00000394849 H3BMG7 143 aa10.37□□□□□ -0.75
UPK3B-203ENST00000394849 H3BQ85 93 aa10.37□□□□□ -0.75
UPK3B-203ENST00000394849 TMEM256-PLSCR3K7ERE1 68 aa10.33□□□□□ -0.76
UPK3B-203ENST00000394849 TRACP01848 142 aa10.33□□□□□ -0.76
UPK3B-203ENST00000394849 LST1O00453 97 aa10.32□□□□□ -0.76
UPK3B-203ENST00000394849 BATFQ16520 125 aa10.31□□□□□ -0.76
UPK3B-203ENST00000394849 A0A1B0GV72 72 aa10.3□□□□□ -0.76
UPK3B-203ENST00000394849 Q6Q795 121 aa10.3□□□□□ -0.76
UPK3B-203ENST00000394849 TEN1Q86WV5 123 aa10.3□□□□□ -0.76
UPK3B-203ENST00000394849 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
UPK3B-203ENST00000394849 SS18L2Q9UHA2 77 aa10.28□□□□□ -0.76
UPK3B-203ENST00000394849 SSPOA2VEC9 5147 aa10.27□□□□□ -0.77
UPK3B-203ENST00000394849 USH2AO75445 5202 aa10.26□□□□□ -0.77
UPK3B-203ENST00000394849 UBE2V1Q13404 147 aa10.26□□□□□ -0.77
UPK3B-203ENST00000394849 ANKRD29Q8N6D5 301 aa10.26□□□□□ -0.77
UPK3B-203ENST00000394849 A0A087WSZ3 146 aa10.24□□□□□ -0.77
UPK3B-203ENST00000394849 ATXN8Q156A1 80 aa10.24□□□□□ -0.77
UPK3B-203ENST00000394849 ATP11AUNQ6ZP68 121 aa10.24□□□□□ -0.77
UPK3B-203ENST00000394849 LYRM7Q5U5X0 104 aa10.23□□□□□ -0.77
UPK3B-203ENST00000394849 KRTAP9-8Q9BYQ0 159 aa10.23□□□□□ -0.77
UPK3B-203ENST00000394849 A0A1W2PNM2 257 aa10.21□□□□□ -0.77
UPK3B-203ENST00000394849 BAALC-AS2P0C853 105 aa10.21□□□□□ -0.77
UPK3B-203ENST00000394849 Q75L30 129 aa10.19□□□□□ -0.78
UPK3B-203ENST00000394849 FCGBPQ9Y6R7 5405 aaPredicted RBP10.18□□□□□ -0.78
UPK3B-203ENST00000394849 TRBV7-4A0A0J9YYF1 115 aa10.17□□□□□ -0.78
UPK3B-203ENST00000394849 RBM3P98179 157 aaKnown RBP10.17□□□□□ -0.78
UPK3B-203ENST00000394849 CCKP06307 115 aa10.16□□□□□ -0.78
UPK3B-203ENST00000394849 DSCR8Q96T75 97 aa10.16□□□□□ -0.78
UPK3B-203ENST00000394849 TRBV20-1A0A075B6N2 111 aa10.14□□□□□ -0.79
UPK3B-203ENST00000394849 VPS25Q9BRG1 176 aa10.14□□□□□ -0.79
UPK3B-203ENST00000394849 C9orf118A6NHY6 69 aa10.12□□□□□ -0.79
UPK3B-203ENST00000394849 TAX1BP3O14907 124 aa10.1□□□□□ -0.79
UPK3B-203ENST00000394849 OBSCN-AS1Q96MR7 158 aa10.1□□□□□ -0.79
UPK3B-203ENST00000394849 C9JAW5 83 aa10.09□□□□□ -0.79
UPK3B-203ENST00000394849 Q96NJ1 140 aa10.09□□□□□ -0.79
UPK3B-203ENST00000394849 SIGMAR1Q99720 223 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms