RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 C5orf42Q9H799 3197 aa3.43□□□□□ -1.86
GAPVD1-206ENST00000394104 DOPEY1Q5JWR5 2465 aa3.42□□□□□ -1.86
GAPVD1-206ENST00000394104 CFAP54Q96N23 3096 aa3.42□□□□□ -1.86
GAPVD1-206ENST00000394104 LINC00472Q9H8W2 130 aa3.41□□□□□ -1.86
GAPVD1-206ENST00000394104 KRTAP26-1Q6PEX3 210 aa3.41□□□□□ -1.86
GAPVD1-206ENST00000394104 KRTAP1-1Q07627 177 aa3.41□□□□□ -1.86
GAPVD1-206ENST00000394104 C20orf166-AS1Q96NR2 134 aa3.41□□□□□ -1.86
GAPVD1-206ENST00000394104 ZFHX4Q86UP3 3567 aa3.4□□□□□ -1.87
GAPVD1-206ENST00000394104 EPG5Q9HCE0 2579 aa3.4□□□□□ -1.87
GAPVD1-206ENST00000394104 HTTP42858 3142 aa3.39□□□□□ -1.87
GAPVD1-206ENST00000394104 MUC3AQ02505 3323 aa3.39□□□□□ -1.87
GAPVD1-206ENST00000394104 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
GAPVD1-206ENST00000394104 Q6ZR54 194 aa3.38□□□□□ -1.87
GAPVD1-206ENST00000394104 SPRR1AP35321 89 aa3.38□□□□□ -1.87
GAPVD1-206ENST00000394104 ANKRD17O75179 2603 aaKnown RBP3.38□□□□□ -1.87
GAPVD1-206ENST00000394104 ASPMQ8IZT6 3477 aa3.37□□□□□ -1.87
GAPVD1-206ENST00000394104 OXTP01178 125 aa3.37□□□□□ -1.87
GAPVD1-206ENST00000394104 KRTAP10-1P60331 282 aa3.37□□□□□ -1.87
GAPVD1-206ENST00000394104 ZNF462Q96JM2 2506 aa3.36□□□□□ -1.87
GAPVD1-206ENST00000394104 KRTAP10-2P60368 255 aa3.35□□□□□ -1.87
GAPVD1-206ENST00000394104 WDR87Q6ZQQ6 2873 aa3.35□□□□□ -1.87
GAPVD1-206ENST00000394104 SPRR1BP22528 89 aa3.34□□□□□ -1.87
GAPVD1-206ENST00000394104 ABCA12Q86UK0 2595 aa3.34□□□□□ -1.87
GAPVD1-206ENST00000394104 MYO18BQ8IUG5 2567 aa3.34□□□□□ -1.87
GAPVD1-206ENST00000394104 SPENQ96T58 3664 aaKnown RBP3.34□□□□□ -1.87
GAPVD1-206ENST00000394104 VPS13AQ96RL7 3174 aa3.34□□□□□ -1.88
GAPVD1-206ENST00000394104 PRUNE2Q8WUY3 3088 aa3.34□□□□□ -1.88
GAPVD1-206ENST00000394104 KRTAP1-5Q9BYS1 174 aa3.33□□□□□ -1.88
GAPVD1-206ENST00000394104 A8MU10 97 aa3.33□□□□□ -1.88
GAPVD1-206ENST00000394104 ANKRD11Q6UB99 2663 aaPredicted RBP3.32□□□□□ -1.88
GAPVD1-206ENST00000394104 JMJD1CQ15652 2540 aa3.32□□□□□ -1.88
GAPVD1-206ENST00000394104 KRTAP25-1Q3LHN0 102 aa3.32□□□□□ -1.88
GAPVD1-206ENST00000394104 ZFYVE26Q68DK2 2539 aa3.32□□□□□ -1.88
GAPVD1-206ENST00000394104 F8P00451 2351 aa3.31□□□□□ -1.88
GAPVD1-206ENST00000394104 PANO1I0J062 215 aa3.31□□□□□ -1.88
GAPVD1-206ENST00000394104 USP9YO00507 2555 aaPredicted RBP3.31□□□□□ -1.88
GAPVD1-206ENST00000394104 SPTBN4Q9H254 2564 aa3.31□□□□□ -1.88
GAPVD1-206ENST00000394104 A8MUU9 505 aa3.3□□□□□ -1.88
GAPVD1-206ENST00000394104 LAMA1P25391 3075 aa3.3□□□□□ -1.88
GAPVD1-206ENST00000394104 ACANP16112 2415 aa3.3□□□□□ -1.88
GAPVD1-206ENST00000394104 MTORP42345 2549 aa3.3□□□□□ -1.88
GAPVD1-206ENST00000394104 PKD1L2Q7Z442 2459 aa3.3□□□□□ -1.88
GAPVD1-206ENST00000394104 ASB16-AS1Q495Z4 193 aa3.3□□□□□ -1.88
GAPVD1-206ENST00000394104 WDFY4Q6ZS81 3184 aa3.29□□□□□ -1.88
GAPVD1-206ENST00000394104 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
GAPVD1-206ENST00000394104 FREM2Q5SZK8 3169 aa3.29□□□□□ -1.88
GAPVD1-206ENST00000394104 LCE6AA0A183 80 aa3.29□□□□□ -1.88
GAPVD1-206ENST00000394104 A0A087X002 238 aa3.29□□□□□ -1.88
GAPVD1-206ENST00000394104 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
GAPVD1-206ENST00000394104 NOTCH2NLQ7Z3S9 236 aa3.28□□□□□ -1.88
GAPVD1-206ENST00000394104 LOC400499M0QZD8 3231 aa3.27□□□□□ -1.89
GAPVD1-206ENST00000394104 A0A0C4DFX4 3053 aa3.27□□□□□ -1.89
GAPVD1-206ENST00000394104 ZFHX3Q15911 3703 aa3.27□□□□□ -1.89
GAPVD1-206ENST00000394104 USP9XQ93008 2570 aaPredicted RBP3.26□□□□□ -1.89
GAPVD1-206ENST00000394104 FASNP49327 2511 aaKnown RBP3.26□□□□□ -1.89
GAPVD1-206ENST00000394104 CELSR3Q9NYQ7 3312 aa3.26□□□□□ -1.89
GAPVD1-206ENST00000394104 FRYLO94915 3013 aa3.25□□□□□ -1.89
GAPVD1-206ENST00000394104 KRTAP29-1A8MX34 341 aaPredicted RBP3.25□□□□□ -1.89
GAPVD1-206ENST00000394104 TLN2Q9Y4G6 2542 aa3.25□□□□□ -1.89
GAPVD1-206ENST00000394104 A6NN06 94 aa3.25□□□□□ -1.89
GAPVD1-206ENST00000394104 COL6A3P12111 3177 aa3.24□□□□□ -1.89
GAPVD1-206ENST00000394104 TRIOO75962 3097 aa3.24□□□□□ -1.89
GAPVD1-206ENST00000394104 KRTAP21-3Q3LHN1 58 aa3.22□□□□□ -1.89
GAPVD1-206ENST00000394104 KRTAP4-16G5E9R7 235 aaPredicted RBP3.22□□□□□ -1.89
GAPVD1-206ENST00000394104 TNP1P09430 55 aa3.22□□□□□ -1.89
GAPVD1-206ENST00000394104 FLNBO75369 2602 aaKnown RBP3.22□□□□□ -1.89
GAPVD1-206ENST00000394104 LAMA5O15230 3695 aa3.21□□□□□ -1.9
GAPVD1-206ENST00000394104 SETD2Q9BYW2 2564 aaPredicted RBP3.21□□□□□ -1.9
GAPVD1-206ENST00000394104 KRTAP11-1Q8IUC1 163 aa3.2□□□□□ -1.9
GAPVD1-206ENST00000394104 RELNP78509 3460 aa3.19□□□□□ -1.9
GAPVD1-206ENST00000394104 SMG1Q96Q15 3661 aaKnown RBP3.18□□□□□ -1.9
GAPVD1-206ENST00000394104 POLQO75417 2590 aa3.17□□□□□ -1.9
GAPVD1-206ENST00000394104 DCHS1Q96JQ0 3298 aa3.17□□□□□ -1.9
GAPVD1-206ENST00000394104 RPS29P62273 56 aaKnown RBP3.15□□□□□ -1.9
GAPVD1-206ENST00000394104 CFAP47Q6ZTR5 3102 aa3.15□□□□□ -1.91
GAPVD1-206ENST00000394104 A0A1B0GVY2 172 aa3.15□□□□□ -1.91
GAPVD1-206ENST00000394104 CHD9Q3L8U1 2897 aa3.15□□□□□ -1.91
GAPVD1-206ENST00000394104 KRTAP10-8P60410 259 aa3.15□□□□□ -1.91
GAPVD1-206ENST00000394104 KRTAP13-2Q52LG2 175 aa3.14□□□□□ -1.91
GAPVD1-206ENST00000394104 HECTD1Q9ULT8 2610 aa3.13□□□□□ -1.91
GAPVD1-206ENST00000394104 ZNF292O60281 2723 aa3.13□□□□□ -1.91
GAPVD1-206ENST00000394104 CHD7Q9P2D1 2997 aa3.13□□□□□ -1.91
GAPVD1-206ENST00000394104 LCE2DQ5TA82 110 aaPredicted RBP3.12□□□□□ -1.91
GAPVD1-206ENST00000394104 HELZ2Q9BYK8 2649 aaKnown RBP3.11□□□□□ -1.91
GAPVD1-206ENST00000394104 PRRC2CQ9Y520 2896 aaKnown RBP3.11□□□□□ -1.91
GAPVD1-206ENST00000394104 KRTAP7-1Q8IUC3 87 aa3.11□□□□□ -1.91
GAPVD1-206ENST00000394104 Q6ZRN7 208 aaPredicted RBP3.1□□□□□ -1.91
GAPVD1-206ENST00000394104 FLG2Q5D862 2391 aaPredicted RBP3.09□□□□□ -1.91
GAPVD1-206ENST00000394104 UNC79Q9P2D8 2635 aa3.09□□□□□ -1.91
GAPVD1-206ENST00000394104 BOD1L1Q8NFC6 3051 aa3.09□□□□□ -1.91
GAPVD1-206ENST00000394104 STAB1Q9NY15 2570 aa3.09□□□□□ -1.92
GAPVD1-206ENST00000394104 FRYQ5TBA9 3013 aa3.09□□□□□ -1.92
GAPVD1-206ENST00000394104 VPS13CQ709C8 3753 aa3.09□□□□□ -1.92
GAPVD1-206ENST00000394104 CSMD2Q7Z408 3487 aa3.09□□□□□ -1.92
GAPVD1-206ENST00000394104 SVEP1Q4LDE5 3571 aa3.08□□□□□ -1.92
GAPVD1-206ENST00000394104 CSMD1Q96PZ7 3565 aa3.08□□□□□ -1.92
GAPVD1-206ENST00000394104 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
GAPVD1-206ENST00000394104 KRTAP13-1Q8IUC0 172 aa3.06□□□□□ -1.92
GAPVD1-206ENST00000394104 USP24Q9UPU5 2620 aa3.05□□□□□ -1.92
GAPVD1-206ENST00000394104 CHD6Q8TD26 2715 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms