RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 UBE2AP49459 152 aa14.32□□□□□ -0.12
RARA-202ENST00000394081 DEFB116Q30KQ4 102 aa14.32□□□□□ -0.12
RARA-202ENST00000394081 C11orf45Q8TAV5 145 aa14.31□□□□□ -0.12
RARA-202ENST00000394081 CASC10Q5T4H9 136 aa14.29□□□□□ -0.12
RARA-202ENST00000394081 C9orf163Q8N9P6 203 aa14.29□□□□□ -0.12
RARA-202ENST00000394081 A0A0G2JQZ4 141 aa14.29□□□□□ -0.12
RARA-202ENST00000394081 A0A1W2PNN7 141 aa14.29□□□□□ -0.12
RARA-202ENST00000394081 A8MWP4 228 aa14.28□□□□□ -0.12
RARA-202ENST00000394081 CNBPP62633 177 aaKnown RBP14.26□□□□□ -0.13
RARA-202ENST00000394081 RPL37AP61513 92 aaKnown RBP14.25□□□□□ -0.13
RARA-202ENST00000394081 SPRR1BP22528 89 aa14.24□□□□□ -0.13
RARA-202ENST00000394081 LINC00472Q9H8W2 130 aa14.23□□□□□ -0.13
RARA-202ENST00000394081 CHKB-CPT1BH3BT56 60 aa14.22□□□□□ -0.13
RARA-202ENST00000394081 INAFM1C9JVW0 142 aa14.22□□□□□ -0.13
RARA-202ENST00000394081 KRTAP10-11P60412 298 aa14.21□□□□□ -0.13
RARA-202ENST00000394081 PRLHP81277 87 aa14.21□□□□□ -0.14
RARA-202ENST00000394081 Q75L30 129 aa14.2□□□□□ -0.14
RARA-202ENST00000394081 LOC101927531A0A1B0GV80 90 aa14.2□□□□□ -0.14
RARA-202ENST00000394081 PRB2P02812 416 aaPredicted RBP14.2□□□□□ -0.14
RARA-202ENST00000394081 CD164Q04900 197 aa14.2□□□□□ -0.14
RARA-202ENST00000394081 C16orf90A8MZG2 172 aa14.19□□□□□ -0.14
RARA-202ENST00000394081 TENM1Q9UKZ4 2725 aa14.19□□□□□ -0.14
RARA-202ENST00000394081 IGLV7-46A0A075B6I9 117 aa14.18□□□□□ -0.14
RARA-202ENST00000394081 H0Y9J4 135 aa14.18□□□□□ -0.14
RARA-202ENST00000394081 PRR15LQ9BU68 103 aa14.18□□□□□ -0.14
RARA-202ENST00000394081 NSD1Q96L73 2696 aaPredicted RBP14.17□□□□□ -0.14
RARA-202ENST00000394081 OXLD1Q5BKU9 147 aa14.16□□□□□ -0.14
RARA-202ENST00000394081 ATP11AUNQ6ZP68 121 aa14.14□□□□□ -0.15
RARA-202ENST00000394081 PKD1L1Q8TDX9 2849 aa14.14□□□□□ -0.15
RARA-202ENST00000394081 COA5Q86WW8 74 aa14.13□□□□□ -0.15
RARA-202ENST00000394081 A0A096LNI7 61 aa14.12□□□□□ -0.15
RARA-202ENST00000394081 A8MU10 97 aa14.12□□□□□ -0.15
RARA-202ENST00000394081 MMP24-AS1A0A0U1RRL7 71 aa14.11□□□□□ -0.15
RARA-202ENST00000394081 KTN1-AS1Q86SY8 53 aa14.1□□□□□ -0.15
RARA-202ENST00000394081 DNAH1Q9P2D7 4330 aa14.08□□□□□ -0.15
RARA-202ENST00000394081 TP53AIP1Q9HCN2 124 aa14.08□□□□□ -0.15
RARA-202ENST00000394081 TRRAPQ9Y4A5 3859 aa14.06□□□□□ -0.16
RARA-202ENST00000394081 ASB16-AS1Q495Z4 193 aa14.04□□□□□ -0.16
RARA-202ENST00000394081 ATRQ13535 2644 aa14.04□□□□□ -0.16
RARA-202ENST00000394081 IGKV2-24A0A0C4DH68 120 aa14.04□□□□□ -0.16
RARA-202ENST00000394081 LCA10Q71F78 164 aa14.04□□□□□ -0.16
RARA-202ENST00000394081 A6NED7 52 aa14.03□□□□□ -0.16
RARA-202ENST00000394081 DNHD1Q96M86 4753 aa14.02□□□□□ -0.16
RARA-202ENST00000394081 CDC42SE1Q9NRR8 79 aa14.02□□□□□ -0.16
RARA-202ENST00000394081 LINC01558Q9Y6Z2 57 aa14.02□□□□□ -0.17
RARA-202ENST00000394081 NDUFS5O43920 106 aa14.01□□□□□ -0.17
RARA-202ENST00000394081 MOBPQ13875 183 aa14.01□□□□□ -0.17
RARA-202ENST00000394081 TENM3Q9P273 2699 aa13.99□□□□□ -0.17
RARA-202ENST00000394081 KRTAP21-3Q3LHN1 58 aa13.99□□□□□ -0.17
RARA-202ENST00000394081 PLAC8Q9NZF1 115 aa13.99□□□□□ -0.17
RARA-202ENST00000394081 Q6ZR54 194 aa13.99□□□□□ -0.17
RARA-202ENST00000394081 PHF5AQ7RTV0 110 aaKnown RBP13.97□□□□□ -0.17
RARA-202ENST00000394081 SPTSSBQ8NFR3 76 aa13.97□□□□□ -0.17
RARA-202ENST00000394081 A6NN06 94 aa13.95□□□□□ -0.18
RARA-202ENST00000394081 FBN1P35555 2871 aaKnown RBP13.94□□□□□ -0.18
RARA-202ENST00000394081 C14orf177Q52M58 125 aa13.93□□□□□ -0.18
RARA-202ENST00000394081 KRTAP11-1Q8IUC1 163 aa13.93□□□□□ -0.18
RARA-202ENST00000394081 COL6A5A8TX70 2615 aa13.91□□□□□ -0.18
RARA-202ENST00000394081 Q96NJ1 140 aa13.9□□□□□ -0.18
RARA-202ENST00000394081 PCOTHQ58A44 107 aa13.9□□□□□ -0.18
RARA-202ENST00000394081 C8orf17Q9NRJ1 99 aa13.88□□□□□ -0.19
RARA-202ENST00000394081 KRTAP13-1Q8IUC0 172 aa13.86□□□□□ -0.19
RARA-202ENST00000394081 MDFIQ99750 246 aa13.86□□□□□ -0.19
RARA-202ENST00000394081 RBM12B-AS1Q9P1G2 102 aa13.85□□□□□ -0.19
RARA-202ENST00000394081 SPAG11AQ6PDA7 123 aa13.83□□□□□ -0.2
RARA-202ENST00000394081 STAB1Q9NY15 2570 aa13.83□□□□□ -0.2
RARA-202ENST00000394081 KRTAP1-5Q9BYS1 174 aa13.83□□□□□ -0.2
RARA-202ENST00000394081 ANK2Q01484 3957 aa13.83□□□□□ -0.2
RARA-202ENST00000394081 CHTF8P0CG12 524 aa13.81□□□□□ -0.2
RARA-202ENST00000394081 HRES1P13985 223 aa13.8□□□□□ -0.2
RARA-202ENST00000394081 A0A1B0GVX0 72 aa13.79□□□□□ -0.2
RARA-202ENST00000394081 C7orf65Q6ZTY9 151 aa13.79□□□□□ -0.2
RARA-202ENST00000394081 MRPL34Q9BQ48 92 aaKnown RBP13.76□□□□□ -0.21
RARA-202ENST00000394081 DNAH3Q8TD57 4116 aa13.75□□□□□ -0.21
RARA-202ENST00000394081 LINC00483Q53H64 154 aa13.75□□□□□ -0.21
RARA-202ENST00000394081 FBN3Q75N90 2809 aa13.74□□□□□ -0.21
RARA-202ENST00000394081 CDK2AP2O75956 126 aa13.71□□□□□ -0.21
RARA-202ENST00000394081 TENM2Q9NT68 2774 aa13.71□□□□□ -0.22
RARA-202ENST00000394081 IGHV6-1A0A0B4J1U7 121 aa13.7□□□□□ -0.22
RARA-202ENST00000394081 IGLV9-49A0A0B4J1Y8 123 aa13.69□□□□□ -0.22
RARA-202ENST00000394081 SPINK7P58062 85 aa13.69□□□□□ -0.22
RARA-202ENST00000394081 ZNF706Q9Y5V0 76 aaPredicted RBP13.66□□□□□ -0.22
RARA-202ENST00000394081 SRRM2Q9UQ35 2752 aaKnown RBP13.66□□□□□ -0.22
RARA-202ENST00000394081 CMYA5Q8N3K9 4069 aa13.66□□□□□ -0.22
RARA-202ENST00000394081 UBE2DNLQ8IWF7 75 aa13.62□□□□□ -0.23
RARA-202ENST00000394081 KRTAP24-1Q3LI83 254 aa13.61□□□□□ -0.23
RARA-202ENST00000394081 DNAH10Q8IVF4 4471 aa13.6□□□□□ -0.23
RARA-202ENST00000394081 WWC2-AS2Q96NR7 200 aa13.59□□□□□ -0.23
RARA-202ENST00000394081 NBEAL1Q6ZS30 2694 aa13.59□□□□□ -0.23
RARA-202ENST00000394081 KRTAP13-3Q3SY46 172 aa13.56□□□□□ -0.24
RARA-202ENST00000394081 PANO1I0J062 215 aa13.56□□□□□ -0.24
RARA-202ENST00000394081 ACYP2P14621 99 aa13.56□□□□□ -0.24
RARA-202ENST00000394081 SPACA4Q8TDM5 124 aa13.55□□□□□ -0.24
RARA-202ENST00000394081 APLNQ9ULZ1 77 aa13.55□□□□□ -0.24
RARA-202ENST00000394081 K7EIL1 84 aa13.54□□□□□ -0.24
RARA-202ENST00000394081 HUWE1Q7Z6Z7 4374 aaKnown RBP13.53□□□□□ -0.24
RARA-202ENST00000394081 A0A087X002 238 aa13.52□□□□□ -0.25
RARA-202ENST00000394081 NOTCH2NLQ7Z3S9 236 aa13.52□□□□□ -0.25
RARA-202ENST00000394081 PRR26Q8N8Z3 221 aa13.51□□□□□ -0.25
RARA-202ENST00000394081 LYSTQ99698 3801 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms