RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 SPRR4Q96PI1 79 aa7.55□□□□□ -1.2
R3HDM2-203ENST00000393811 TLX1NBP0CAT3 122 aa7.54□□□□□ -1.2
R3HDM2-203ENST00000393811 PRR15LQ9BU68 103 aa7.54□□□□□ -1.2
R3HDM2-203ENST00000393811 NBEAL1Q6ZS30 2694 aa7.54□□□□□ -1.2
R3HDM2-203ENST00000393811 PMAIP1Q13794 54 aa7.54□□□□□ -1.2
R3HDM2-203ENST00000393811 PKD1L1Q8TDX9 2849 aa7.53□□□□□ -1.2
R3HDM2-203ENST00000393811 COL6A5A8TX70 2615 aa7.53□□□□□ -1.2
R3HDM2-203ENST00000393811 NSD1Q96L73 2696 aaPredicted RBP7.53□□□□□ -1.2
R3HDM2-203ENST00000393811 CDK2AP2O75956 126 aa7.53□□□□□ -1.2
R3HDM2-203ENST00000393811 PLA2G2DQ9UNK4 145 aa7.53□□□□□ -1.2
R3HDM2-203ENST00000393811 PCOTHQ58A44 107 aa7.53□□□□□ -1.2
R3HDM2-203ENST00000393811 AKAP9Q99996 3911 aa7.52□□□□□ -1.2
R3HDM2-203ENST00000393811 OTOGQ6ZRI0 2925 aa7.52□□□□□ -1.21
R3HDM2-203ENST00000393811 SEC61GP60059 68 aa7.51□□□□□ -1.21
R3HDM2-203ENST00000393811 TNP2Q05952 138 aa7.51□□□□□ -1.21
R3HDM2-203ENST00000393811 A6NED7 52 aa7.5□□□□□ -1.21
R3HDM2-203ENST00000393811 SPRR1AP35321 89 aa7.5□□□□□ -1.21
R3HDM2-203ENST00000393811 IGLV9-49A0A0B4J1Y8 123 aa7.49□□□□□ -1.21
R3HDM2-203ENST00000393811 CHTF8P0CG12 524 aa7.49□□□□□ -1.21
R3HDM2-203ENST00000393811 TENM3Q9P273 2699 aa7.49□□□□□ -1.21
R3HDM2-203ENST00000393811 PHF5AQ7RTV0 110 aaKnown RBP7.49□□□□□ -1.21
R3HDM2-203ENST00000393811 KRTAP4-16G5E9R7 235 aaPredicted RBP7.49□□□□□ -1.21
R3HDM2-203ENST00000393811 Q1T7F1 81 aa7.48□□□□□ -1.21
R3HDM2-203ENST00000393811 IGLV5-37A0A075B6J1 123 aa7.48□□□□□ -1.21
R3HDM2-203ENST00000393811 PRR15Q8IV56 129 aa7.45□□□□□ -1.22
R3HDM2-203ENST00000393811 C16orf90A8MZG2 172 aa7.44□□□□□ -1.22
R3HDM2-203ENST00000393811 ZCCHC13Q8WW36 166 aaKnown RBP7.44□□□□□ -1.22
R3HDM2-203ENST00000393811 CYP4F30PQ9H0H9 118 aa7.44□□□□□ -1.22
R3HDM2-203ENST00000393811 KRTAP7-1Q8IUC3 87 aa7.44□□□□□ -1.22
R3HDM2-203ENST00000393811 A8MWP4 228 aa7.43□□□□□ -1.22
R3HDM2-203ENST00000393811 LIMD2Q9BT23 127 aa7.43□□□□□ -1.22
R3HDM2-203ENST00000393811 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
R3HDM2-203ENST00000393811 C14orf177Q52M58 125 aa7.42□□□□□ -1.22
R3HDM2-203ENST00000393811 LCE6AA0A183 80 aa7.41□□□□□ -1.22
R3HDM2-203ENST00000393811 H3BPC8 53 aa7.4□□□□□ -1.22
R3HDM2-203ENST00000393811 SPAG11AQ6PDA7 123 aa7.39□□□□□ -1.23
R3HDM2-203ENST00000393811 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
R3HDM2-203ENST00000393811 COA5Q86WW8 74 aa7.39□□□□□ -1.23
R3HDM2-203ENST00000393811 KRTAP24-1Q3LI83 254 aa7.39□□□□□ -1.23
R3HDM2-203ENST00000393811 CNBPP62633 177 aaKnown RBP7.38□□□□□ -1.23
R3HDM2-203ENST00000393811 TRRAPQ9Y4A5 3859 aa7.38□□□□□ -1.23
R3HDM2-203ENST00000393811 Q8N9P0 234 aaPredicted RBP7.35□□□□□ -1.23
R3HDM2-203ENST00000393811 SPANXA2-OT1Q8N9U9 137 aa7.35□□□□□ -1.23
R3HDM2-203ENST00000393811 Q5VV11 94 aa7.35□□□□□ -1.23
R3HDM2-203ENST00000393811 ANK3Q12955 4377 aaKnown RBP7.34□□□□□ -1.23
R3HDM2-203ENST00000393811 A8MU10 97 aa7.34□□□□□ -1.23
R3HDM2-203ENST00000393811 KRTAP29-1A8MX34 341 aaPredicted RBP7.32□□□□□ -1.24
R3HDM2-203ENST00000393811 IGLV8-61A0A075B6I0 122 aa7.31□□□□□ -1.24
R3HDM2-203ENST00000393811 LINC00472Q9H8W2 130 aa7.31□□□□□ -1.24
R3HDM2-203ENST00000393811 KRTAP1-5Q9BYS1 174 aa7.31□□□□□ -1.24
R3HDM2-203ENST00000393811 FBN1P35555 2871 aaKnown RBP7.3□□□□□ -1.24
R3HDM2-203ENST00000393811 MOBPQ13875 183 aa7.3□□□□□ -1.24
R3HDM2-203ENST00000393811 TP53AIP1Q9HCN2 124 aa7.3□□□□□ -1.24
R3HDM2-203ENST00000393811 STAB2Q8WWQ8 2551 aa7.29□□□□□ -1.24
R3HDM2-203ENST00000393811 MMP24-AS1A0A0U1RRL7 71 aa7.29□□□□□ -1.24
R3HDM2-203ENST00000393811 KRTAP11-1Q8IUC1 163 aa7.29□□□□□ -1.24
R3HDM2-203ENST00000393811 C8orf17Q9NRJ1 99 aa7.28□□□□□ -1.24
R3HDM2-203ENST00000393811 K7EIL1 84 aa7.27□□□□□ -1.25
R3HDM2-203ENST00000393811 LOC101927531A0A1B0GV80 90 aa7.27□□□□□ -1.25
R3HDM2-203ENST00000393811 ANAPC11Q9NYG5 84 aa7.27□□□□□ -1.25
R3HDM2-203ENST00000393811 IGLV7-46A0A075B6I9 117 aa7.25□□□□□ -1.25
R3HDM2-203ENST00000393811 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
R3HDM2-203ENST00000393811 SRRM2Q9UQ35 2752 aaKnown RBP7.25□□□□□ -1.25
R3HDM2-203ENST00000393811 ZNF706Q9Y5V0 76 aaPredicted RBP7.24□□□□□ -1.25
R3HDM2-203ENST00000393811 RETNLBQ9BQ08 111 aa7.24□□□□□ -1.25
R3HDM2-203ENST00000393811 CIRBP-AS1Q8TBR5 109 aa7.24□□□□□ -1.25
R3HDM2-203ENST00000393811 CD164Q04900 197 aa7.23□□□□□ -1.25
R3HDM2-203ENST00000393811 ATP11AUNQ6ZP68 121 aa7.23□□□□□ -1.25
R3HDM2-203ENST00000393811 MRPL34Q9BQ48 92 aaKnown RBP7.23□□□□□ -1.25
R3HDM2-203ENST00000393811 SPRR1BP22528 89 aa7.22□□□□□ -1.25
R3HDM2-203ENST00000393811 A0A1B0GVX0 72 aa7.22□□□□□ -1.25
R3HDM2-203ENST00000393811 KTN1-AS1Q86SY8 53 aa7.21□□□□□ -1.25
R3HDM2-203ENST00000393811 Q75L30 129 aa7.2□□□□□ -1.26
R3HDM2-203ENST00000393811 NBDYA0A0U1RRE5 68 aa7.19□□□□□ -1.26
R3HDM2-203ENST00000393811 PRR26Q8N8Z3 221 aa7.19□□□□□ -1.26
R3HDM2-203ENST00000393811 MDFIQ99750 246 aa7.19□□□□□ -1.26
R3HDM2-203ENST00000393811 PANO1I0J062 215 aa7.19□□□□□ -1.26
R3HDM2-203ENST00000393811 LCA10Q71F78 164 aa7.19□□□□□ -1.26
R3HDM2-203ENST00000393811 CDC42SE1Q9NRR8 79 aa7.18□□□□□ -1.26
R3HDM2-203ENST00000393811 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.17□□□□□ -1.26
R3HDM2-203ENST00000393811 HRES1P13985 223 aa7.15□□□□□ -1.26
R3HDM2-203ENST00000393811 APLNQ9ULZ1 77 aa7.15□□□□□ -1.26
R3HDM2-203ENST00000393811 SPINK7P58062 85 aa7.14□□□□□ -1.27
R3HDM2-203ENST00000393811 PSORS1C2Q9UIG4 136 aa7.14□□□□□ -1.27
R3HDM2-203ENST00000393811 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
R3HDM2-203ENST00000393811 ACYP2P14621 99 aa7.13□□□□□ -1.27
R3HDM2-203ENST00000393811 RBM12B-AS1Q9P1G2 102 aa7.13□□□□□ -1.27
R3HDM2-203ENST00000393811 TENM2Q9NT68 2774 aa7.12□□□□□ -1.27
R3HDM2-203ENST00000393811 A0A087X002 238 aa7.11□□□□□ -1.27
R3HDM2-203ENST00000393811 NOTCH2NLQ7Z3S9 236 aa7.11□□□□□ -1.27
R3HDM2-203ENST00000393811 RTL8CO15255 209 aa7.1□□□□□ -1.27
R3HDM2-203ENST00000393811 NUPR2A6NF83 97 aa7.1□□□□□ -1.27
R3HDM2-203ENST00000393811 C7orf65Q6ZTY9 151 aa7.09□□□□□ -1.27
R3HDM2-203ENST00000393811 A0A1B0GU69 56 aa7.09□□□□□ -1.27
R3HDM2-203ENST00000393811 ZNF861PO60384 105 aa7.09□□□□□ -1.27
R3HDM2-203ENST00000393811 IGLV5-52A0A0A0MRZ9 124 aa7.09□□□□□ -1.28
R3HDM2-203ENST00000393811 Q6ZR54 194 aa7.08□□□□□ -1.28
R3HDM2-203ENST00000393811 Q96NJ1 140 aa7.08□□□□□ -1.28
R3HDM2-203ENST00000393811 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
R3HDM2-203ENST00000393811 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms