RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 LINC01547P58512 204 aaPredicted RBP4.35□□□□□ -1.71
HMGB3P1-201ENST00000393368 TAL2Q16559 108 aa4.35□□□□□ -1.71
HMGB3P1-201ENST00000393368 PYY3Q5JQD4 70 aa4.35□□□□□ -1.71
HMGB3P1-201ENST00000393368 SSBP3-AS1Q7Z2R9 100 aa4.35□□□□□ -1.71
HMGB3P1-201ENST00000393368 A0A0G2JQZ4 141 aa4.34□□□□□ -1.71
HMGB3P1-201ENST00000393368 SPINK1P00995 79 aa4.34□□□□□ -1.71
HMGB3P1-201ENST00000393368 SLC25A34Q6PIV7 304 aa4.34□□□□□ -1.71
HMGB3P1-201ENST00000393368 SMIM29Q86T20 159 aa4.34□□□□□ -1.71
HMGB3P1-201ENST00000393368 LAMTOR3Q9UHA4 124 aa4.34□□□□□ -1.71
HMGB3P1-201ENST00000393368 TEX49A0A1B0GTD5 131 aa4.33□□□□□ -1.72
HMGB3P1-201ENST00000393368 CFC1BP0CG36 223 aa4.33□□□□□ -1.72
HMGB3P1-201ENST00000393368 CFC1P0CG37 223 aa4.33□□□□□ -1.72
HMGB3P1-201ENST00000393368 Q8N377 158 aa4.33□□□□□ -1.72
HMGB3P1-201ENST00000393368 HIGD1BQ9P298 99 aa4.33□□□□□ -1.72
HMGB3P1-201ENST00000393368 IGLV5-48A0A075B6I7 105 aa4.32□□□□□ -1.72
HMGB3P1-201ENST00000393368 LINC00575Q6W349 94 aa4.32□□□□□ -1.72
HMGB3P1-201ENST00000393368 RAB37Q96AX2 223 aa4.32□□□□□ -1.72
HMGB3P1-201ENST00000393368 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
HMGB3P1-201ENST00000393368 FXYD2P54710 66 aa4.31□□□□□ -1.72
HMGB3P1-201ENST00000393368 VAMP3Q15836 100 aa4.31□□□□□ -1.72
HMGB3P1-201ENST00000393368 TPRXLQ17RH7 258 aa4.31□□□□□ -1.72
HMGB3P1-201ENST00000393368 Q6ZQY7 126 aa4.31□□□□□ -1.72
HMGB3P1-201ENST00000393368 CEND1Q8N111 149 aa4.31□□□□□ -1.72
HMGB3P1-201ENST00000393368 CDIP1Q9H305 208 aa4.31□□□□□ -1.72
HMGB3P1-201ENST00000393368 NHP2Q9NX24 153 aaKnown RBP4.31□□□□□ -1.72
HMGB3P1-201ENST00000393368 hADV29S1A0JD25 119 aa4.3□□□□□ -1.72
HMGB3P1-201ENST00000393368 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
HMGB3P1-201ENST00000393368 SLC25A20O43772 301 aa4.3□□□□□ -1.72
HMGB3P1-201ENST00000393368 RPS29P62273 56 aaKnown RBP4.3□□□□□ -1.72
HMGB3P1-201ENST00000393368 FP248Q71RG6 208 aaPredicted RBP4.3□□□□□ -1.72
HMGB3P1-201ENST00000393368 A0A0B4J2C4 111 aa4.29□□□□□ -1.72
HMGB3P1-201ENST00000393368 LOC105371267A0A1B0GV96 52 aa4.29□□□□□ -1.72
HMGB3P1-201ENST00000393368 K7ERJ3 54 aa4.29□□□□□ -1.72
HMGB3P1-201ENST00000393368 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
HMGB3P1-201ENST00000393368 FAM218AQ96MZ4 157 aa4.29□□□□□ -1.72
HMGB3P1-201ENST00000393368 PRO1933Q9H354 126 aa4.29□□□□□ -1.72
HMGB3P1-201ENST00000393368 BVES-AS1Q5T3Y7 98 aa4.28□□□□□ -1.72
HMGB3P1-201ENST00000393368 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
HMGB3P1-201ENST00000393368 F8WEM9 126 aa4.26□□□□□ -1.73
HMGB3P1-201ENST00000393368 HSD52Q0P140 79 aa4.26□□□□□ -1.73
HMGB3P1-201ENST00000393368 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P1-201ENST00000393368 LIMD2Q9BT23 127 aa4.26□□□□□ -1.73
HMGB3P1-201ENST00000393368 PRO1854Q9UHT4 67 aa4.26□□□□□ -1.73
HMGB3P1-201ENST00000393368 H3BUT2 72 aa4.25□□□□□ -1.73
HMGB3P1-201ENST00000393368 TRIAP1O43715 76 aa4.25□□□□□ -1.73
HMGB3P1-201ENST00000393368 CD164Q04900 197 aa4.25□□□□□ -1.73
HMGB3P1-201ENST00000393368 UQCR10Q9UDW1 63 aa4.25□□□□□ -1.73
HMGB3P1-201ENST00000393368 C9orf92A6NGG3 77 aa4.24□□□□□ -1.73
HMGB3P1-201ENST00000393368 IGFL1Q6UW32 110 aa4.24□□□□□ -1.73
HMGB3P1-201ENST00000393368 CLEC2BQ92478 149 aa4.24□□□□□ -1.73
HMGB3P1-201ENST00000393368 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
HMGB3P1-201ENST00000393368 H0YGX0 51 aa4.23□□□□□ -1.73
HMGB3P1-201ENST00000393368 OCIAD2Q56VL3 154 aa4.23□□□□□ -1.73
HMGB3P1-201ENST00000393368 IGLV8-61A0A075B6I0 122 aa4.22□□□□□ -1.73
HMGB3P1-201ENST00000393368 C1orf195Q5TG92 126 aa4.22□□□□□ -1.73
HMGB3P1-201ENST00000393368 SNHG12Q9BXW3 62 aa4.22□□□□□ -1.73
HMGB3P1-201ENST00000393368 PSMB2P49721 201 aa4.21□□□□□ -1.74
HMGB3P1-201ENST00000393368 Q6JHZ5 121 aa4.21□□□□□ -1.74
HMGB3P1-201ENST00000393368 TRBV7-7A0A0K0K1E9 115 aa4.2□□□□□ -1.74
HMGB3P1-201ENST00000393368 A0A1B0GV72 72 aa4.2□□□□□ -1.74
HMGB3P1-201ENST00000393368 FABP2P12104 132 aa4.2□□□□□ -1.74
HMGB3P1-201ENST00000393368 NDUFV3P56181 108 aaKnown RBP4.2□□□□□ -1.74
HMGB3P1-201ENST00000393368 Q5XG85 94 aa4.2□□□□□ -1.74
HMGB3P1-201ENST00000393368 PPDPFLQ8WWR9 84 aa4.2□□□□□ -1.74
HMGB3P1-201ENST00000393368 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
HMGB3P1-201ENST00000393368 SNCGO76070 127 aa4.19□□□□□ -1.74
HMGB3P1-201ENST00000393368 ASB16-AS1Q495Z4 193 aa4.19□□□□□ -1.74
HMGB3P1-201ENST00000393368 TCL1BO95988 128 aa4.18□□□□□ -1.74
HMGB3P1-201ENST00000393368 SMIM6P0DI80 62 aa4.18□□□□□ -1.74
HMGB3P1-201ENST00000393368 A0A1B0GX51 115 aa4.17□□□□□ -1.74
HMGB3P1-201ENST00000393368 H3BMG7 143 aa4.17□□□□□ -1.74
HMGB3P1-201ENST00000393368 SEC61BP60468 96 aaKnown RBP4.17□□□□□ -1.74
HMGB3P1-201ENST00000393368 NAA38Q9BRA0 125 aaKnown RBP4.17□□□□□ -1.74
HMGB3P1-201ENST00000393368 DNAL4O96015 105 aa4.16□□□□□ -1.74
HMGB3P1-201ENST00000393368 COX6CP09669 75 aa4.16□□□□□ -1.74
HMGB3P1-201ENST00000393368 SCGB1C2P0DMR2 95 aa4.16□□□□□ -1.74
HMGB3P1-201ENST00000393368 ORMDL1Q9P0S3 153 aa4.16□□□□□ -1.74
HMGB3P1-201ENST00000393368 A0A087WSZ3 146 aa4.15□□□□□ -1.75
HMGB3P1-201ENST00000393368 A0A1W2PNM2 257 aa4.15□□□□□ -1.75
HMGB3P1-201ENST00000393368 PCOTHQ58A44 107 aa4.15□□□□□ -1.75
HMGB3P1-201ENST00000393368 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
HMGB3P1-201ENST00000393368 KRTAP4-11Q9BYQ6 195 aa4.15□□□□□ -1.75
HMGB3P1-201ENST00000393368 A0A0U1RQV1 116 aa4.14□□□□□ -1.75
HMGB3P1-201ENST00000393368 LST1O00453 97 aa4.14□□□□□ -1.75
HMGB3P1-201ENST00000393368 LCE5AQ5TCM9 118 aa4.14□□□□□ -1.75
HMGB3P1-201ENST00000393368 M0R143 59 aa4.13□□□□□ -1.75
HMGB3P1-201ENST00000393368 BATFQ16520 125 aa4.13□□□□□ -1.75
HMGB3P1-201ENST00000393368 Q6Q795 121 aa4.13□□□□□ -1.75
HMGB3P1-201ENST00000393368 TEN1Q86WV5 123 aa4.13□□□□□ -1.75
HMGB3P1-201ENST00000393368 TRACP01848 142 aa4.12□□□□□ -1.75
HMGB3P1-201ENST00000393368 ANKRD29Q8N6D5 301 aa4.12□□□□□ -1.75
HMGB3P1-201ENST00000393368 OBSCN-AS1Q96MR7 158 aa4.12□□□□□ -1.75
HMGB3P1-201ENST00000393368 TSTD3H0UI37 97 aa4.11□□□□□ -1.75
HMGB3P1-201ENST00000393368 TMEM256-PLSCR3K7ERE1 68 aa4.11□□□□□ -1.75
HMGB3P1-201ENST00000393368 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
HMGB3P1-201ENST00000393368 Q96NJ1 140 aa4.11□□□□□ -1.75
HMGB3P1-201ENST00000393368 SS18L2Q9UHA2 77 aa4.11□□□□□ -1.75
HMGB3P1-201ENST00000393368 CCKP06307 115 aa4.09□□□□□ -1.75
HMGB3P1-201ENST00000393368 BAALC-AS2P0C853 105 aa4.09□□□□□ -1.75
HMGB3P1-201ENST00000393368 SEC61GP60059 68 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms