RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 MKI67P46013 3256 aaKnown RBP8.18□□□□□ -1.1
GSE1-202ENST00000393243 EPG5Q9HCE0 2579 aa8.17□□□□□ -1.1
GSE1-202ENST00000393243 XIRP2A4UGR9 3374 aa8.15□□□□□ -1.11
GSE1-202ENST00000393243 LAMA2P24043 3122 aaKnown RBP8.14□□□□□ -1.11
GSE1-202ENST00000393243 A0A0C4DFX4 3053 aa8.14□□□□□ -1.11
GSE1-202ENST00000393243 FREM2Q5SZK8 3169 aa8.12□□□□□ -1.11
GSE1-202ENST00000393243 ATRQ13535 2644 aa8.12□□□□□ -1.11
GSE1-202ENST00000393243 PLAC8Q9NZF1 115 aa8.11□□□□□ -1.11
GSE1-202ENST00000393243 Q5VSD8 79 aa8.1□□□□□ -1.11
GSE1-202ENST00000393243 AKAP13Q12802 2813 aa8.09□□□□□ -1.11
GSE1-202ENST00000393243 SPATA8Q6RVD6 105 aa8.09□□□□□ -1.11
GSE1-202ENST00000393243 FLNBO75369 2602 aaKnown RBP8.08□□□□□ -1.12
GSE1-202ENST00000393243 FLNAP21333 2647 aaKnown RBP8.08□□□□□ -1.12
GSE1-202ENST00000393243 LINC00472Q9H8W2 130 aa8.07□□□□□ -1.12
GSE1-202ENST00000393243 M0QZ58 72 aa8.07□□□□□ -1.12
GSE1-202ENST00000393243 ITPR3Q14573 2671 aa8.06□□□□□ -1.12
GSE1-202ENST00000393243 CELSR3Q9NYQ7 3312 aa8.05□□□□□ -1.12
GSE1-202ENST00000393243 KRTAP1-5Q9BYS1 174 aa8.05□□□□□ -1.12
GSE1-202ENST00000393243 H1FX-AS1Q4G0G2 97 aa8.05□□□□□ -1.12
GSE1-202ENST00000393243 ROMO1P60602 79 aa8.03□□□□□ -1.12
GSE1-202ENST00000393243 OXTP01178 125 aa8.03□□□□□ -1.12
GSE1-202ENST00000393243 SPRR1AP35321 89 aa8.03□□□□□ -1.12
GSE1-202ENST00000393243 KRTAP26-1Q6PEX3 210 aa8.02□□□□□ -1.13
GSE1-202ENST00000393243 MAST4O15021 2626 aa8.01□□□□□ -1.13
GSE1-202ENST00000393243 RPL37P61927 97 aaKnown RBP8.01□□□□□ -1.13
GSE1-202ENST00000393243 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
GSE1-202ENST00000393243 TRIOO75962 3097 aa8.01□□□□□ -1.13
GSE1-202ENST00000393243 KRTAP10-2P60368 255 aa8.01□□□□□ -1.13
GSE1-202ENST00000393243 KRTAP10-1P60331 282 aa8□□□□□ -1.13
GSE1-202ENST00000393243 CHD7Q9P2D1 2997 aa7.98□□□□□ -1.13
GSE1-202ENST00000393243 BRCA2P51587 3418 aa7.98□□□□□ -1.13
GSE1-202ENST00000393243 CHD6Q8TD26 2715 aa7.97□□□□□ -1.13
GSE1-202ENST00000393243 SEC61BP60468 96 aaKnown RBP7.95□□□□□ -1.14
GSE1-202ENST00000393243 LAMA3Q16787 3333 aa7.94□□□□□ -1.14
GSE1-202ENST00000393243 CFAP46Q8IYW2 2715 aa7.93□□□□□ -1.14
GSE1-202ENST00000393243 PANO1I0J062 215 aa7.92□□□□□ -1.14
GSE1-202ENST00000393243 Q6ZR54 194 aa7.91□□□□□ -1.14
GSE1-202ENST00000393243 MGAQ8IWI9 3026 aa7.89□□□□□ -1.15
GSE1-202ENST00000393243 SPRR1BP22528 89 aa7.89□□□□□ -1.15
GSE1-202ENST00000393243 PRUNE2Q8WUY3 3088 aa7.88□□□□□ -1.15
GSE1-202ENST00000393243 RANBP2P49792 3224 aaKnown RBP7.87□□□□□ -1.15
GSE1-202ENST00000393243 A0A087X002 238 aa7.86□□□□□ -1.15
GSE1-202ENST00000393243 NOTCH2NLQ7Z3S9 236 aa7.86□□□□□ -1.15
GSE1-202ENST00000393243 NBEAL1Q6ZS30 2694 aa7.86□□□□□ -1.15
GSE1-202ENST00000393243 KRTAP16-1A8MUX0 517 aa7.85□□□□□ -1.15
GSE1-202ENST00000393243 TEX15Q9BXT5 2789 aa7.85□□□□□ -1.15
GSE1-202ENST00000393243 DNAH14Q0VDD8 3507 aa7.84□□□□□ -1.15
GSE1-202ENST00000393243 WDFY4Q6ZS81 3184 aa7.84□□□□□ -1.15
GSE1-202ENST00000393243 VPS13AQ96RL7 3174 aa7.84□□□□□ -1.15
GSE1-202ENST00000393243 A8MU10 97 aa7.84□□□□□ -1.15
GSE1-202ENST00000393243 CENPEQ02224 2701 aa7.83□□□□□ -1.16
GSE1-202ENST00000393243 DMBT1Q9UGM3 2413 aaPredicted RBP7.83□□□□□ -1.16
GSE1-202ENST00000393243 HELZ2Q9BYK8 2649 aaKnown RBP7.82□□□□□ -1.16
GSE1-202ENST00000393243 UNC80Q8N2C7 3258 aa7.8□□□□□ -1.16
GSE1-202ENST00000393243 REV3LO60673 3130 aa7.8□□□□□ -1.16
GSE1-202ENST00000393243 STAB1Q9NY15 2570 aa7.78□□□□□ -1.16
GSE1-202ENST00000393243 C20orf166-AS1Q96NR2 134 aa7.77□□□□□ -1.17
GSE1-202ENST00000393243 CDH23Q9H251 3354 aa7.76□□□□□ -1.17
GSE1-202ENST00000393243 LCE6AA0A183 80 aa7.74□□□□□ -1.17
GSE1-202ENST00000393243 KRTAP11-1Q8IUC1 163 aa7.73□□□□□ -1.17
GSE1-202ENST00000393243 KRTAP29-1A8MX34 341 aaPredicted RBP7.71□□□□□ -1.17
GSE1-202ENST00000393243 FRYQ5TBA9 3013 aa7.71□□□□□ -1.18
GSE1-202ENST00000393243 KRTAP4-16G5E9R7 235 aaPredicted RBP7.71□□□□□ -1.18
GSE1-202ENST00000393243 GCN1Q92616 2671 aaKnown RBP7.71□□□□□ -1.18
GSE1-202ENST00000393243 NBEAL2Q6ZNJ1 2754 aa7.68□□□□□ -1.18
GSE1-202ENST00000393243 SZT2Q5T011 3432 aa7.68□□□□□ -1.18
GSE1-202ENST00000393243 HTTP42858 3142 aa7.68□□□□□ -1.18
GSE1-202ENST00000393243 A8MUU9 505 aa7.68□□□□□ -1.18
GSE1-202ENST00000393243 TEP1Q99973 2627 aaKnown RBP7.67□□□□□ -1.18
GSE1-202ENST00000393243 KRTAP25-1Q3LHN0 102 aa7.65□□□□□ -1.18
GSE1-202ENST00000393243 UNC79Q9P2D8 2635 aa7.65□□□□□ -1.18
GSE1-202ENST00000393243 COL6A5A8TX70 2615 aa7.65□□□□□ -1.19
GSE1-202ENST00000393243 NDUFAF8A1L188 74 aa7.64□□□□□ -1.19
GSE1-202ENST00000393243 COL6A3P12111 3177 aa7.63□□□□□ -1.19
GSE1-202ENST00000393243 STAB2Q8WWQ8 2551 aa7.62□□□□□ -1.19
GSE1-202ENST00000393243 MAP1AP78559 2803 aaPredicted RBP7.62□□□□□ -1.19
GSE1-202ENST00000393243 KALRNO60229 2985 aa7.62□□□□□ -1.19
GSE1-202ENST00000393243 NOTCH1P46531 2555 aa7.61□□□□□ -1.19
GSE1-202ENST00000393243 CFAP47Q6ZTR5 3102 aa7.6□□□□□ -1.19
GSE1-202ENST00000393243 A6NN06 94 aa7.57□□□□□ -1.2
GSE1-202ENST00000393243 CHD9Q3L8U1 2897 aa7.57□□□□□ -1.2
GSE1-202ENST00000393243 VCANP13611 3396 aa7.57□□□□□ -1.2
GSE1-202ENST00000393243 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
GSE1-202ENST00000393243 TRANK1O15050 2925 aa7.53□□□□□ -1.2
GSE1-202ENST00000393243 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.21
GSE1-202ENST00000393243 SETXQ7Z333 2677 aaKnown RBP7.52□□□□□ -1.21
GSE1-202ENST00000393243 DMXL2Q8TDJ6 3036 aa7.52□□□□□ -1.21
GSE1-202ENST00000393243 ASB16-AS1Q495Z4 193 aa7.5□□□□□ -1.21
GSE1-202ENST00000393243 KRTAP13-2Q52LG2 175 aa7.5□□□□□ -1.21
GSE1-202ENST00000393243 SPEGQ15772 3267 aa7.49□□□□□ -1.21
GSE1-202ENST00000393243 CRYBG3Q68DQ2 2970 aa7.49□□□□□ -1.21
GSE1-202ENST00000393243 LAMA1P25391 3075 aa7.48□□□□□ -1.21
GSE1-202ENST00000393243 ASH1LQ9NR48 2969 aaKnown RBP7.45□□□□□ -1.22
GSE1-202ENST00000393243 DSPP15924 2871 aaKnown RBP7.43□□□□□ -1.22
GSE1-202ENST00000393243 Q6ZRN7 208 aaPredicted RBP7.42□□□□□ -1.22
GSE1-202ENST00000393243 LRBAP50851 2863 aa7.42□□□□□ -1.22
GSE1-202ENST00000393243 A0A1B0GVY2 172 aa7.41□□□□□ -1.22
GSE1-202ENST00000393243 TNP1P09430 55 aa7.4□□□□□ -1.22
GSE1-202ENST00000393243 APCP25054 2843 aa7.4□□□□□ -1.22
GSE1-202ENST00000393243 ZNF292O60281 2723 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms