RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 COL27A1Q8IZC6 1860 aaPredicted RBP2.47□□□□□ -2.01
UBR3-202ENST00000392632 A0A0G2JQZ4 141 aa2.47□□□□□ -2.01
UBR3-202ENST00000392632 H1FX-AS1Q4G0G2 97 aa2.47□□□□□ -2.01
UBR3-202ENST00000392632 CR1P17927 2039 aa2.46□□□□□ -2.01
UBR3-202ENST00000392632 SPRR1BP22528 89 aa2.46□□□□□ -2.02
UBR3-202ENST00000392632 M0QZ58 72 aa2.46□□□□□ -2.02
UBR3-202ENST00000392632 RPL37P61927 97 aaKnown RBP2.46□□□□□ -2.02
UBR3-202ENST00000392632 KRTAP1-3Q8IUG1 177 aa2.46□□□□□ -2.02
UBR3-202ENST00000392632 FLNAP21333 2647 aaKnown RBP2.46□□□□□ -2.02
UBR3-202ENST00000392632 COL6A5A8TX70 2615 aa2.46□□□□□ -2.02
UBR3-202ENST00000392632 WDR87Q6ZQQ6 2873 aa2.44□□□□□ -2.02
UBR3-202ENST00000392632 LINC01558Q9Y6Z2 57 aa2.43□□□□□ -2.02
UBR3-202ENST00000392632 OCR1Q9BZK8 76 aa2.43□□□□□ -2.02
UBR3-202ENST00000392632 UNC79Q9P2D8 2635 aa2.43□□□□□ -2.02
UBR3-202ENST00000392632 SPRR1AP35321 89 aa2.43□□□□□ -2.02
UBR3-202ENST00000392632 MMP24-AS1A0A0U1RRL7 71 aa2.43□□□□□ -2.02
UBR3-202ENST00000392632 IGSF10Q6WRI0 2623 aa2.42□□□□□ -2.02
UBR3-202ENST00000392632 Q5W150 140 aa2.42□□□□□ -2.02
UBR3-202ENST00000392632 Q75L30 129 aa2.42□□□□□ -2.02
UBR3-202ENST00000392632 PCNTO95613 3336 aa2.42□□□□□ -2.02
UBR3-202ENST00000392632 EIF4EBP3O60516 100 aaPredicted RBP2.42□□□□□ -2.02
UBR3-202ENST00000392632 Q8N9P0 234 aaPredicted RBP2.41□□□□□ -2.02
UBR3-202ENST00000392632 KRTAP21-3Q3LHN1 58 aa2.41□□□□□ -2.02
UBR3-202ENST00000392632 ROMO1P60602 79 aa2.41□□□□□ -2.02
UBR3-202ENST00000392632 KRTAP10-1P60331 282 aa2.4□□□□□ -2.02
UBR3-202ENST00000392632 RPS29P62273 56 aaKnown RBP2.4□□□□□ -2.02
UBR3-202ENST00000392632 LINC00472Q9H8W2 130 aa2.39□□□□□ -2.03
UBR3-202ENST00000392632 AKAP13Q12802 2813 aa2.39□□□□□ -2.03
UBR3-202ENST00000392632 PANO1I0J062 215 aa2.38□□□□□ -2.03
UBR3-202ENST00000392632 TEX15Q9BXT5 2789 aa2.38□□□□□ -2.03
UBR3-202ENST00000392632 ADM2Q7Z4H4 148 aa2.37□□□□□ -2.03
UBR3-202ENST00000392632 Q6ZR54 194 aa2.37□□□□□ -2.03
UBR3-202ENST00000392632 KRTAP10-2P60368 255 aa2.36□□□□□ -2.03
UBR3-202ENST00000392632 ASB16-AS1Q495Z4 193 aa2.36□□□□□ -2.03
UBR3-202ENST00000392632 Q5XG85 94 aa2.36□□□□□ -2.03
UBR3-202ENST00000392632 C20orf166-AS1Q96NR2 134 aa2.36□□□□□ -2.03
UBR3-202ENST00000392632 MAP1AP78559 2803 aaPredicted RBP2.35□□□□□ -2.03
UBR3-202ENST00000392632 BRCA2P51587 3418 aa2.34□□□□□ -2.03
UBR3-202ENST00000392632 TNP1P09430 55 aa2.34□□□□□ -2.03
UBR3-202ENST00000392632 CENPEQ02224 2701 aa2.34□□□□□ -2.03
UBR3-202ENST00000392632 A8MUU9 505 aa2.34□□□□□ -2.04
UBR3-202ENST00000392632 CENPFP49454 3210 aa2.33□□□□□ -2.04
UBR3-202ENST00000392632 KRTAP1-5Q9BYS1 174 aa2.33□□□□□ -2.04
UBR3-202ENST00000392632 KRTAP26-1Q6PEX3 210 aa2.32□□□□□ -2.04
UBR3-202ENST00000392632 Q8NDZ9 215 aa2.32□□□□□ -2.04
UBR3-202ENST00000392632 NSD1Q96L73 2696 aaPredicted RBP2.32□□□□□ -2.04
UBR3-202ENST00000392632 CEP350Q5VT06 3117 aa2.31□□□□□ -2.04
UBR3-202ENST00000392632 LAMA2P24043 3122 aaKnown RBP2.3□□□□□ -2.04
UBR3-202ENST00000392632 SPATA8Q6RVD6 105 aa2.3□□□□□ -2.04
UBR3-202ENST00000392632 CHD6Q8TD26 2715 aa2.3□□□□□ -2.04
UBR3-202ENST00000392632 PRO2289Q9P1D8 64 aa2.29□□□□□ -2.04
UBR3-202ENST00000392632 TNRC18O15417 2968 aaPredicted RBP2.29□□□□□ -2.04
UBR3-202ENST00000392632 Q5VV11 94 aa2.29□□□□□ -2.04
UBR3-202ENST00000392632 LAMA3Q16787 3333 aa2.29□□□□□ -2.04
UBR3-202ENST00000392632 PP632Q6XCG6 107 aa2.28□□□□□ -2.04
UBR3-202ENST00000392632 KMT2BQ9UMN6 2715 aaPredicted RBP2.28□□□□□ -2.04
UBR3-202ENST00000392632 A0A087X002 238 aa2.28□□□□□ -2.04
UBR3-202ENST00000392632 PRAC1Q96KF2 57 aa2.28□□□□□ -2.04
UBR3-202ENST00000392632 NOTCH2NLQ7Z3S9 236 aa2.28□□□□□ -2.05
UBR3-202ENST00000392632 ZNF292O60281 2723 aa2.28□□□□□ -2.05
UBR3-202ENST00000392632 KRTAP16-1A8MUX0 517 aa2.27□□□□□ -2.05
UBR3-202ENST00000392632 MKI67P46013 3256 aaKnown RBP2.26□□□□□ -2.05
UBR3-202ENST00000392632 KRTAP29-1A8MX34 341 aaPredicted RBP2.25□□□□□ -2.05
UBR3-202ENST00000392632 KRTAP4-16G5E9R7 235 aaPredicted RBP2.25□□□□□ -2.05
UBR3-202ENST00000392632 Q6ZRN7 208 aaPredicted RBP2.25□□□□□ -2.05
UBR3-202ENST00000392632 H3BS24 57 aa2.24□□□□□ -2.05
UBR3-202ENST00000392632 KRTAP10-8P60410 259 aa2.24□□□□□ -2.05
UBR3-202ENST00000392632 DNAH12Q6ZR08 3092 aa2.24□□□□□ -2.05
UBR3-202ENST00000392632 HTTP42858 3142 aa2.24□□□□□ -2.05
UBR3-202ENST00000392632 FLNCQ14315 2725 aa2.24□□□□□ -2.05
UBR3-202ENST00000392632 GCN1Q92616 2671 aaKnown RBP2.23□□□□□ -2.05
UBR3-202ENST00000392632 SPTBN5Q9NRC6 3674 aaKnown RBP2.23□□□□□ -2.05
UBR3-202ENST00000392632 UTP20O75691 2785 aaKnown RBP2.23□□□□□ -2.05
UBR3-202ENST00000392632 USP34Q70CQ2 3546 aa2.22□□□□□ -2.05
UBR3-202ENST00000392632 EYSQ5T1H1 3165 aa2.22□□□□□ -2.05
UBR3-202ENST00000392632 UBR5O95071 2799 aaPredicted RBP2.22□□□□□ -2.05
UBR3-202ENST00000392632 PRRC2CQ9Y520 2896 aaKnown RBP2.22□□□□□ -2.05
UBR3-202ENST00000392632 TENM4Q6N022 2769 aa2.22□□□□□ -2.05
UBR3-202ENST00000392632 CHD9Q3L8U1 2897 aa2.21□□□□□ -2.06
UBR3-202ENST00000392632 LOC100996750A0A140TA64 210 aa2.21□□□□□ -2.06
UBR3-202ENST00000392632 P0C880 135 aa2.21□□□□□ -2.06
UBR3-202ENST00000392632 KRTAP4-6Q9BYQ5 205 aa2.21□□□□□ -2.06
UBR3-202ENST00000392632 KRTAP10-10P60014 251 aa2.2□□□□□ -2.06
UBR3-202ENST00000392632 KRTAP25-1Q3LHN0 102 aa2.2□□□□□ -2.06
UBR3-202ENST00000392632 CYSTM1Q9H1C7 97 aa2.2□□□□□ -2.06
UBR3-202ENST00000392632 TPRXLQ17RH7 258 aa2.2□□□□□ -2.06
UBR3-202ENST00000392632 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
UBR3-202ENST00000392632 KRTAP13-2Q52LG2 175 aa2.2□□□□□ -2.06
UBR3-202ENST00000392632 CDH23Q9H251 3354 aa2.19□□□□□ -2.06
UBR3-202ENST00000392632 REV3LO60673 3130 aa2.19□□□□□ -2.06
UBR3-202ENST00000392632 TENM3Q9P273 2699 aa2.18□□□□□ -2.06
UBR3-202ENST00000392632 MUC3AQ02505 3323 aa2.18□□□□□ -2.06
UBR3-202ENST00000392632 HIVEP1P15822 2718 aa2.18□□□□□ -2.06
UBR3-202ENST00000392632 LCE2BO14633 110 aa2.17□□□□□ -2.06
UBR3-202ENST00000392632 KRTAP13-1Q8IUC0 172 aa2.17□□□□□ -2.06
UBR3-202ENST00000392632 ITPR2Q14571 2701 aa2.17□□□□□ -2.06
UBR3-202ENST00000392632 XIRP2A4UGR9 3374 aa2.17□□□□□ -2.06
UBR3-202ENST00000392632 A8MU10 97 aa2.17□□□□□ -2.06
UBR3-202ENST00000392632 SZT2Q5T011 3432 aa2.16□□□□□ -2.06
UBR3-202ENST00000392632 XP32Q5T750 250 aa2.15□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms