RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 LINC01547P58512 204 aaPredicted RBP7.17□□□□□ -1.26
GGPS1-203ENST00000391855 CD164Q04900 197 aa7.17□□□□□ -1.26
GGPS1-203ENST00000391855 LINC00575Q6W349 94 aa7.17□□□□□ -1.26
GGPS1-203ENST00000391855 C12orf57Q99622 126 aa7.17□□□□□ -1.26
GGPS1-203ENST00000391855 KRTAP19-1Q8IUB9 90 aa7.16□□□□□ -1.26
GGPS1-203ENST00000391855 A0A0B4J2C4 111 aa7.15□□□□□ -1.27
GGPS1-203ENST00000391855 hADV29S1A0JD25 119 aa7.15□□□□□ -1.27
GGPS1-203ENST00000391855 C2orf91Q6ZV80 131 aa7.15□□□□□ -1.27
GGPS1-203ENST00000391855 SMIM29Q86T20 159 aa7.15□□□□□ -1.27
GGPS1-203ENST00000391855 RAB37Q96AX2 223 aa7.15□□□□□ -1.27
GGPS1-203ENST00000391855 CFC1BP0CG36 223 aa7.13□□□□□ -1.27
GGPS1-203ENST00000391855 CFC1P0CG37 223 aa7.13□□□□□ -1.27
GGPS1-203ENST00000391855 F8WEM9 126 aa7.12□□□□□ -1.27
GGPS1-203ENST00000391855 H7C2G1 150 aa7.12□□□□□ -1.27
GGPS1-203ENST00000391855 KRTAP13-3Q3SY46 172 aa7.12□□□□□ -1.27
GGPS1-203ENST00000391855 PYY3Q5JQD4 70 aa7.12□□□□□ -1.27
GGPS1-203ENST00000391855 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.12□□□□□ -1.27
GGPS1-203ENST00000391855 Q6ZQY7 126 aa7.12□□□□□ -1.27
GGPS1-203ENST00000391855 PPDPFLQ8WWR9 84 aa7.12□□□□□ -1.27
GGPS1-203ENST00000391855 SNCGO76070 127 aa7.11□□□□□ -1.27
GGPS1-203ENST00000391855 CEND1Q8N111 149 aa7.11□□□□□ -1.27
GGPS1-203ENST00000391855 TMA7Q9Y2S6 64 aaKnown RBP7.11□□□□□ -1.27
GGPS1-203ENST00000391855 LCE3BQ5TA77 95 aa7.1□□□□□ -1.27
GGPS1-203ENST00000391855 H0YGX0 51 aa7.1□□□□□ -1.27
GGPS1-203ENST00000391855 Q5XG85 94 aa7.1□□□□□ -1.27
GGPS1-203ENST00000391855 HRCT1Q6UXD1 115 aa7.1□□□□□ -1.27
GGPS1-203ENST00000391855 A0A0U1RQV1 116 aa7.09□□□□□ -1.28
GGPS1-203ENST00000391855 MUC17Q685J3 4493 aa7.08□□□□□ -1.28
GGPS1-203ENST00000391855 HSD52Q0P140 79 aa7.08□□□□□ -1.28
GGPS1-203ENST00000391855 OCIAD2Q56VL3 154 aa7.08□□□□□ -1.28
GGPS1-203ENST00000391855 Q6JHZ5 121 aa7.08□□□□□ -1.28
GGPS1-203ENST00000391855 PRO1854Q9UHT4 67 aa7.08□□□□□ -1.28
GGPS1-203ENST00000391855 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
GGPS1-203ENST00000391855 A0A1B0GX51 115 aa7.06□□□□□ -1.28
GGPS1-203ENST00000391855 FXYD2P54710 66 aa7.06□□□□□ -1.28
GGPS1-203ENST00000391855 UQCR10Q9UDW1 63 aa7.05□□□□□ -1.28
GGPS1-203ENST00000391855 CLEC2BQ92478 149 aa7.04□□□□□ -1.28
GGPS1-203ENST00000391855 TCL1BO95988 128 aa7.03□□□□□ -1.28
GGPS1-203ENST00000391855 SNHG12Q9BXW3 62 aa7.03□□□□□ -1.28
GGPS1-203ENST00000391855 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
GGPS1-203ENST00000391855 ASB16-AS1Q495Z4 193 aa7.01□□□□□ -1.29
GGPS1-203ENST00000391855 A0A0G2JQZ4 141 aa7.01□□□□□ -1.29
GGPS1-203ENST00000391855 IGFL1Q6UW32 110 aa7.01□□□□□ -1.29
GGPS1-203ENST00000391855 FAM218AQ96MZ4 157 aa7□□□□□ -1.29
GGPS1-203ENST00000391855 TRBV7-7A0A0K0K1E9 115 aa6.99□□□□□ -1.29
GGPS1-203ENST00000391855 TRIAP1O43715 76 aa6.99□□□□□ -1.29
GGPS1-203ENST00000391855 C1orf195Q5TG92 126 aa6.99□□□□□ -1.29
GGPS1-203ENST00000391855 COX6CP09669 75 aa6.98□□□□□ -1.29
GGPS1-203ENST00000391855 KRTAP19-4Q3LI73 84 aa6.98□□□□□ -1.29
GGPS1-203ENST00000391855 H3BQ85 93 aa6.97□□□□□ -1.29
GGPS1-203ENST00000391855 PSMB2P49721 201 aa6.97□□□□□ -1.29
GGPS1-203ENST00000391855 K7ERJ3 54 aa6.96□□□□□ -1.3
GGPS1-203ENST00000391855 DNAL4O96015 105 aa6.96□□□□□ -1.3
GGPS1-203ENST00000391855 NDUFV3P56181 108 aaKnown RBP6.96□□□□□ -1.3
GGPS1-203ENST00000391855 MUC2Q02817 5179 aa6.96□□□□□ -1.3
GGPS1-203ENST00000391855 H3BUT2 72 aa6.95□□□□□ -1.3
GGPS1-203ENST00000391855 Q6Q795 121 aa6.94□□□□□ -1.3
GGPS1-203ENST00000391855 SS18L2Q9UHA2 77 aa6.94□□□□□ -1.3
GGPS1-203ENST00000391855 SMIM6P0DI80 62 aa6.93□□□□□ -1.3
GGPS1-203ENST00000391855 FABP2P12104 132 aa6.93□□□□□ -1.3
GGPS1-203ENST00000391855 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
GGPS1-203ENST00000391855 ORMDL1Q9P0S3 153 aa6.93□□□□□ -1.3
GGPS1-203ENST00000391855 H3BMG7 143 aa6.92□□□□□ -1.3
GGPS1-203ENST00000391855 TEN1Q86WV5 123 aa6.92□□□□□ -1.3
GGPS1-203ENST00000391855 M0R143 59 aa6.91□□□□□ -1.3
GGPS1-203ENST00000391855 LST1O00453 97 aa6.9□□□□□ -1.31
GGPS1-203ENST00000391855 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
GGPS1-203ENST00000391855 TRACP01848 142 aa6.88□□□□□ -1.31
GGPS1-203ENST00000391855 SCGB1C2P0DMR2 95 aa6.87□□□□□ -1.31
GGPS1-203ENST00000391855 KRTAP9-9Q9BYP9 154 aa6.87□□□□□ -1.31
GGPS1-203ENST00000391855 KRTAP9-4Q9BYQ2 154 aa6.87□□□□□ -1.31
GGPS1-203ENST00000391855 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
GGPS1-203ENST00000391855 RPL37P61927 97 aaKnown RBP6.85□□□□□ -1.31
GGPS1-203ENST00000391855 UBE2V1Q13404 147 aa6.85□□□□□ -1.31
GGPS1-203ENST00000391855 A0A087WSZ3 146 aa6.84□□□□□ -1.31
GGPS1-203ENST00000391855 PCOTHQ58A44 107 aa6.84□□□□□ -1.31
GGPS1-203ENST00000391855 ANKRD29Q8N6D5 301 aa6.84□□□□□ -1.31
GGPS1-203ENST00000391855 TSTD3H0UI37 97 aa6.84□□□□□ -1.32
GGPS1-203ENST00000391855 KRTAP4-1Q9BYQ7 146 aa6.84□□□□□ -1.32
GGPS1-203ENST00000391855 TRBV7-4A0A0J9YYF1 115 aa6.83□□□□□ -1.32
GGPS1-203ENST00000391855 A0A1W2PNM2 257 aa6.83□□□□□ -1.32
GGPS1-203ENST00000391855 LYRM7Q5U5X0 104 aa6.79□□□□□ -1.32
GGPS1-203ENST00000391855 ATXN8Q156A1 80 aa6.78□□□□□ -1.32
GGPS1-203ENST00000391855 OBSCN-AS1Q96MR7 158 aa6.78□□□□□ -1.32
GGPS1-203ENST00000391855 A0A1B0GV72 72 aa6.77□□□□□ -1.33
GGPS1-203ENST00000391855 CCKP06307 115 aa6.77□□□□□ -1.33
GGPS1-203ENST00000391855 RBM3P98179 157 aaKnown RBP6.77□□□□□ -1.33
GGPS1-203ENST00000391855 C21orf62-AS1Q17RA5 79 aa6.77□□□□□ -1.33
GGPS1-203ENST00000391855 Q75L30 129 aa6.77□□□□□ -1.33
GGPS1-203ENST00000391855 Q96NJ1 140 aa6.77□□□□□ -1.33
GGPS1-203ENST00000391855 DSCR8Q96T75 97 aa6.76□□□□□ -1.33
GGPS1-203ENST00000391855 BAALC-AS2P0C853 105 aa6.76□□□□□ -1.33
GGPS1-203ENST00000391855 SIGMAR1Q99720 223 aa6.76□□□□□ -1.33
GGPS1-203ENST00000391855 LOC105371267A0A1B0GV96 52 aa6.75□□□□□ -1.33
GGPS1-203ENST00000391855 JMJD7-PLA2G4BH0Y9G9 81 aa6.73□□□□□ -1.33
GGPS1-203ENST00000391855 ATP11AUNQ6ZP68 121 aa6.73□□□□□ -1.33
GGPS1-203ENST00000391855 NAA38Q9BRA0 125 aaKnown RBP6.73□□□□□ -1.33
GGPS1-203ENST00000391855 TRBV20-1A0A075B6N2 111 aa6.72□□□□□ -1.33
GGPS1-203ENST00000391855 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
GGPS1-203ENST00000391855 C9JAW5 83 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms