RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 MAP3K1Q13233 1512 aa-3.91□□□□□ -3.04
SNORA40.4-201ENST00000390971 S4R3F8 94 aa-3.92□□□□□ -3.04
SNORA40.4-201ENST00000390971 TNRC6CQ9HCJ0 1690 aaKnown RBP-3.92□□□□□ -3.04
SNORA40.4-201ENST00000390971 DNAH17Q9UFH2 4485 aa-3.92□□□□□ -3.04
SNORA40.4-201ENST00000390971 TLN2Q9Y4G6 2542 aa-3.93□□□□□ -3.04
SNORA40.4-201ENST00000390971 C20orf202A1L168 122 aa-3.95□□□□□ -3.04
SNORA40.4-201ENST00000390971 MT-ATP8P03928 68 aa-3.95□□□□□ -3.04
SNORA40.4-201ENST00000390971 LRRC7Q96NW7 1537 aa-3.95□□□□□ -3.04
SNORA40.4-201ENST00000390971 TLN1Q9Y490 2541 aaKnown RBP-3.96□□□□□ -3.04
SNORA40.4-201ENST00000390971 UQCRHLA0A096LP55 91 aa-3.97□□□□□ -3.04
SNORA40.4-201ENST00000390971 SPENQ96T58 3664 aaKnown RBP-3.98□□□□□ -3.05
SNORA40.4-201ENST00000390971 ATMQ13315 3056 aa-3.98□□□□□ -3.05
SNORA40.4-201ENST00000390971 DYNC2H1Q8NCM8 4307 aaKnown RBP-3.99□□□□□ -3.05
SNORA40.4-201ENST00000390971 LINC00587B1AMM8 73 aa-3.99□□□□□ -3.05
SNORA40.4-201ENST00000390971 MT1EP04732 61 aa-3.99□□□□□ -3.05
SNORA40.4-201ENST00000390971 MT1BP07438 61 aa-4□□□□□ -3.05
SNORA40.4-201ENST00000390971 DNAH10Q8IVF4 4471 aa-4□□□□□ -3.05
SNORA40.4-201ENST00000390971 MT1MQ8N339 61 aa-4.01□□□□□ -3.05
SNORA40.4-201ENST00000390971 CLTCQ00610 1675 aaKnown RBP-4.01□□□□□ -3.05
SNORA40.4-201ENST00000390971 PLXNC1O60486 1568 aa-4.02□□□□□ -3.05
SNORA40.4-201ENST00000390971 COL5A1-AS1Q5SY13 56 aa-4.02□□□□□ -3.05
SNORA40.4-201ENST00000390971 SPTBN5Q9NRC6 3674 aaKnown RBP-4.03□□□□□ -3.05
SNORA40.4-201ENST00000390971 FYCO1Q9BQS8 1478 aa-4.03□□□□□ -3.05
SNORA40.4-201ENST00000390971 C3orf79P0CE67 100 aa-4.04□□□□□ -3.06
SNORA40.4-201ENST00000390971 MT1LQ93083 61 aa-4.04□□□□□ -3.06
SNORA40.4-201ENST00000390971 GAFA1Q96PS6 74 aa-4.04□□□□□ -3.06
SNORA40.4-201ENST00000390971 ADGRG4Q8IZF6 3080 aa-4.04□□□□□ -3.06
SNORA40.4-201ENST00000390971 MT2AP02795 61 aa-4.05□□□□□ -3.06
SNORA40.4-201ENST00000390971 PRO3102Q9H379 93 aa-4.05□□□□□ -3.06
SNORA40.4-201ENST00000390971 EPRSP07814 1512 aaKnown RBP-4.05□□□□□ -3.06
SNORA40.4-201ENST00000390971 TIAM2Q8IVF5 1701 aa-4.06□□□□□ -3.06
SNORA40.4-201ENST00000390971 SCN11AQ9UI33 1791 aa-4.07□□□□□ -3.06
SNORA40.4-201ENST00000390971 A0A1B0GUT8 65 aa-4.08□□□□□ -3.06
SNORA40.4-201ENST00000390971 SMR3BP02814 79 aaPredicted RBP-4.08□□□□□ -3.06
SNORA40.4-201ENST00000390971 PRLHP81277 87 aa-4.08□□□□□ -3.06
SNORA40.4-201ENST00000390971 SPTAN1Q13813 2472 aaKnown RBP-4.08□□□□□ -3.06
SNORA40.4-201ENST00000390971 BOD1L1Q8NFC6 3051 aa-4.08□□□□□ -3.06
SNORA40.4-201ENST00000390971 IQCF6A8MYZ5 107 aa-4.1□□□□□ -3.07
SNORA40.4-201ENST00000390971 FAUP35544 74 aaKnown RBP-4.1□□□□□ -3.07
SNORA40.4-201ENST00000390971 RGPD1P0DJD0 1748 aa-4.1□□□□□ -3.07
SNORA40.4-201ENST00000390971 USP32Q8NFA0 1604 aa-4.1□□□□□ -3.07
SNORA40.4-201ENST00000390971 LINC00158P58513 81 aa-4.11□□□□□ -3.07
SNORA40.4-201ENST00000390971 MYH4Q9Y623 1939 aa-4.11□□□□□ -3.07
SNORA40.4-201ENST00000390971 S100A10P60903 97 aa-4.12□□□□□ -3.07
SNORA40.4-201ENST00000390971 FANCAO15360 1455 aa-4.12□□□□□ -3.07
SNORA40.4-201ENST00000390971 LINC00032P0C843 101 aa-4.13□□□□□ -3.07
SNORA40.4-201ENST00000390971 ATP7BP35670 1465 aa-4.13□□□□□ -3.07
SNORA40.4-201ENST00000390971 TEX14Q8IWB6 1497 aa-4.15□□□□□ -3.07
SNORA40.4-201ENST00000390971 PLGLAQ15195 96 aa-4.15□□□□□ -3.07
SNORA40.4-201ENST00000390971 SUPT6HQ7KZ85 1726 aaKnown RBP-4.15□□□□□ -3.07
SNORA40.4-201ENST00000390971 RGPD3A6NKT7 1758 aaPredicted RBP-4.18□□□□□ -3.08
SNORA40.4-201ENST00000390971 RGPD4Q7Z3J3 1758 aa-4.18□□□□□ -3.08
SNORA40.4-201ENST00000390971 WIZO95785 1651 aa-4.19□□□□□ -3.08
SNORA40.4-201ENST00000390971 NESP48681 1621 aa-4.2□□□□□ -3.08
SNORA40.4-201ENST00000390971 CYB5AP00167 134 aa-4.21□□□□□ -3.08
SNORA40.4-201ENST00000390971 HMGN2P05204 90 aaKnown RBP-4.21□□□□□ -3.08
SNORA40.4-201ENST00000390971 MGAQ8IWI9 3026 aa-4.23□□□□□ -3.09
SNORA40.4-201ENST00000390971 DPY30Q9C005 99 aa-4.23□□□□□ -3.09
SNORA40.4-201ENST00000390971 NWD1Q149M9 1564 aa-4.23□□□□□ -3.09
SNORA40.4-201ENST00000390971 ATP10BO94823 1461 aa-4.24□□□□□ -3.09
SNORA40.4-201ENST00000390971 BAZ1AQ9NRL2 1556 aaPredicted RBP-4.24□□□□□ -3.09
SNORA40.4-201ENST00000390971 POLR1AO95602 1720 aaPredicted RBP-4.25□□□□□ -3.09
SNORA40.4-201ENST00000390971 DEPDC5O75140 1603 aa-4.25□□□□□ -3.09
SNORA40.4-201ENST00000390971 CDC42BPGQ6DT37 1551 aa-4.27□□□□□ -3.09
SNORA40.4-201ENST00000390971 CLPSL2Q6UWE3 100 aa-4.27□□□□□ -3.09
SNORA40.4-201ENST00000390971 WFDC9Q8NEX5 89 aa-4.27□□□□□ -3.09
SNORA40.4-201ENST00000390971 TRAV21A0A0B4J279 112 aa-4.28□□□□□ -3.09
SNORA40.4-201ENST00000390971 SMIM11AP58511 58 aa-4.29□□□□□ -3.1
SNORA40.4-201ENST00000390971 MAGI3Q5TCQ9 1506 aa-4.3□□□□□ -3.1
SNORA40.4-201ENST00000390971 KRTAP19-6Q3LI70 58 aa-4.3□□□□□ -3.1
SNORA40.4-201ENST00000390971 CSMD2Q7Z408 3487 aa-4.3□□□□□ -3.1
SNORA40.4-201ENST00000390971 LTN1O94822 1766 aa-4.34□□□□□ -3.1
SNORA40.4-201ENST00000390971 SARNPP82979 210 aaKnown RBP-4.34□□□□□ -3.1
SNORA40.4-201ENST00000390971 PEA15Q15121 130 aa-4.34□□□□□ -3.1
SNORA40.4-201ENST00000390971 FREM2Q5SZK8 3169 aa-4.34□□□□□ -3.1
SNORA40.4-201ENST00000390971 PRUNE2Q8WUY3 3088 aa-4.34□□□□□ -3.1
SNORA40.4-201ENST00000390971 MYO3AQ8NEV4 1616 aa-4.35□□□□□ -3.11
SNORA40.4-201ENST00000390971 ZFHX4Q86UP3 3567 aa-4.36□□□□□ -3.11
SNORA40.4-201ENST00000390971 C14orf144Q96I85 54 aa-4.36□□□□□ -3.11
SNORA40.4-201ENST00000390971 S100PP25815 95 aa-4.37□□□□□ -3.11
SNORA40.4-201ENST00000390971 CEP170BQ9Y4F5 1589 aaPredicted RBP-4.37□□□□□ -3.11
SNORA40.4-201ENST00000390971 CNTLNQ9NXG0 1405 aa-4.38□□□□□ -3.11
SNORA40.4-201ENST00000390971 LYNX1G3V0Z9 82 aa-4.39□□□□□ -3.11
SNORA40.4-201ENST00000390971 TCEAL7Q9BRU2 100 aa-4.39□□□□□ -3.11
SNORA40.4-201ENST00000390971 NEXMIFQ5QGS0 1516 aa-4.4□□□□□ -3.11
SNORA40.4-201ENST00000390971 DOT1LQ8TEK3 1739 aa-4.4□□□□□ -3.11
SNORA40.4-201ENST00000390971 PLIN4Q96Q06 1357 aa-4.4□□□□□ -3.11
SNORA40.4-201ENST00000390971 LCE6AA0A183 80 aa-4.41□□□□□ -3.12
SNORA40.4-201ENST00000390971 DEFB106AQ8N104 65 aa-4.41□□□□□ -3.12
SNORA40.4-201ENST00000390971 DEFB130BP0DP73 79 aa-4.42□□□□□ -3.12
SNORA40.4-201ENST00000390971 DEFB130AP0DP74 79 aa-4.42□□□□□ -3.12
SNORA40.4-201ENST00000390971 CDC42BPAQ5VT25 1732 aa-4.42□□□□□ -3.12
SNORA40.4-201ENST00000390971 KRTAP8-1Q8IUC2 63 aa-4.42□□□□□ -3.12
SNORA40.4-201ENST00000390971 IFI6P09912 130 aa-4.43□□□□□ -3.12
SNORA40.4-201ENST00000390971 UBR1Q8IWV7 1749 aa-4.45□□□□□ -3.12
SNORA40.4-201ENST00000390971 IAPPP10997 89 aa-4.45□□□□□ -3.12
SNORA40.4-201ENST00000390971 NDUFB1O75438 58 aa-4.46□□□□□ -3.12
SNORA40.4-201ENST00000390971 ACBD7Q8N6N7 88 aa-4.46□□□□□ -3.12
SNORA40.4-201ENST00000390971 RBP2P50120 134 aa-4.47□□□□□ -3.13
SNORA40.4-201ENST00000390971 GYPAP02724 150 aa-4.49□□□□□ -3.13
Retrieved 100 of 20,778 RNA–protein pairs in 316 ms