RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 LINC01558Q9Y6Z2 57 aa8.01□□□□□ -1.13
SRGAP3-202ENST00000383836 FRYQ5TBA9 3013 aa8□□□□□ -1.13
SRGAP3-202ENST00000383836 IGLV5-37A0A075B6J1 123 aa7.99□□□□□ -1.13
SRGAP3-202ENST00000383836 PRAC1Q96KF2 57 aa7.99□□□□□ -1.13
SRGAP3-202ENST00000383836 C9orf92A6NGG3 77 aa7.98□□□□□ -1.13
SRGAP3-202ENST00000383836 MGAQ8IWI9 3026 aa7.98□□□□□ -1.13
SRGAP3-202ENST00000383836 A0A1B0GU33 70 aa7.97□□□□□ -1.13
SRGAP3-202ENST00000383836 CSAG1Q6PB30 78 aa7.97□□□□□ -1.13
SRGAP3-202ENST00000383836 UBR5O95071 2799 aaPredicted RBP7.97□□□□□ -1.13
SRGAP3-202ENST00000383836 LINC00483Q53H64 154 aa7.97□□□□□ -1.13
SRGAP3-202ENST00000383836 DMAC1Q96GE9 116 aa7.96□□□□□ -1.13
SRGAP3-202ENST00000383836 LRBAP50851 2863 aa7.96□□□□□ -1.14
SRGAP3-202ENST00000383836 TACC2O95359 2948 aa7.96□□□□□ -1.14
SRGAP3-202ENST00000383836 CHD7Q9P2D1 2997 aa7.95□□□□□ -1.14
SRGAP3-202ENST00000383836 A0A0A0MQY5 61 aa7.94□□□□□ -1.14
SRGAP3-202ENST00000383836 LINC00612Q8N6U2 182 aa7.94□□□□□ -1.14
SRGAP3-202ENST00000383836 GIG44P09565 113 aaPredicted RBP7.93□□□□□ -1.14
SRGAP3-202ENST00000383836 NIPBLQ6KC79 2804 aaeCLIP7.92□□□□□ -1.14
SRGAP3-202ENST00000383836 IGSF10Q6WRI0 2623 aa7.91□□□□□ -1.14
SRGAP3-202ENST00000383836 ANAPC11Q9NYG5 84 aa7.91□□□□□ -1.14
SRGAP3-202ENST00000383836 TRIOO75962 3097 aa7.91□□□□□ -1.14
SRGAP3-202ENST00000383836 OXTP01178 125 aa7.9□□□□□ -1.15
SRGAP3-202ENST00000383836 HRES1P13985 223 aa7.9□□□□□ -1.15
SRGAP3-202ENST00000383836 CNBPP62633 177 aaKnown RBP7.9□□□□□ -1.15
SRGAP3-202ENST00000383836 ASB16-AS1Q495Z4 193 aa7.89□□□□□ -1.15
SRGAP3-202ENST00000383836 A0A096LNT2 108 aa7.89□□□□□ -1.15
SRGAP3-202ENST00000383836 IGLV7-43P04211 117 aa7.88□□□□□ -1.15
SRGAP3-202ENST00000383836 ZNF575Q86XF7 245 aa7.87□□□□□ -1.15
SRGAP3-202ENST00000383836 PSORS1C2Q9UIG4 136 aa7.87□□□□□ -1.15
SRGAP3-202ENST00000383836 SPINK7P58062 85 aa7.87□□□□□ -1.15
SRGAP3-202ENST00000383836 KALRNO60229 2985 aa7.84□□□□□ -1.15
SRGAP3-202ENST00000383836 Q6ZSA8 131 aa7.83□□□□□ -1.16
SRGAP3-202ENST00000383836 SMR3BP02814 79 aaPredicted RBP7.83□□□□□ -1.16
SRGAP3-202ENST00000383836 CAMK2N1Q7Z7J9 78 aa7.83□□□□□ -1.16
SRGAP3-202ENST00000383836 C19orf73Q9NVV2 129 aa7.83□□□□□ -1.16
SRGAP3-202ENST00000383836 NBEAQ8NFP9 2946 aa7.82□□□□□ -1.16
SRGAP3-202ENST00000383836 KRTAP24-1Q3LI83 254 aa7.81□□□□□ -1.16
SRGAP3-202ENST00000383836 A0A087WTM6 91 aa7.81□□□□□ -1.16
SRGAP3-202ENST00000383836 MMP24-AS1A0A0U1RRL7 71 aa7.8□□□□□ -1.16
SRGAP3-202ENST00000383836 KRTAP10-11P60412 298 aa7.77□□□□□ -1.17
SRGAP3-202ENST00000383836 CASC10Q5T4H9 136 aa7.76□□□□□ -1.17
SRGAP3-202ENST00000383836 NF1P21359 2839 aa7.74□□□□□ -1.17
SRGAP3-202ENST00000383836 ROMO1P60602 79 aa7.72□□□□□ -1.17
SRGAP3-202ENST00000383836 ZZEF1O43149 2961 aa7.7□□□□□ -1.18
SRGAP3-202ENST00000383836 Q5W150 140 aa7.69□□□□□ -1.18
SRGAP3-202ENST00000383836 TNP2Q05952 138 aa7.69□□□□□ -1.18
SRGAP3-202ENST00000383836 LINC00472Q9H8W2 130 aa7.68□□□□□ -1.18
SRGAP3-202ENST00000383836 K7EIL1 84 aa7.67□□□□□ -1.18
SRGAP3-202ENST00000383836 KRTAP16-1A8MUX0 517 aa7.67□□□□□ -1.18
SRGAP3-202ENST00000383836 ZCCHC13Q8WW36 166 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-202ENST00000383836 ASH1LQ9NR48 2969 aaKnown RBP7.66□□□□□ -1.18
SRGAP3-202ENST00000383836 Q8NDZ9 215 aa7.66□□□□□ -1.18
SRGAP3-202ENST00000383836 SPRR1AP35321 89 aa7.65□□□□□ -1.19
SRGAP3-202ENST00000383836 S4R3F8 94 aa7.65□□□□□ -1.19
SRGAP3-202ENST00000383836 HIVEP1P15822 2718 aa7.64□□□□□ -1.19
SRGAP3-202ENST00000383836 CELSR2Q9HCU4 2923 aa7.64□□□□□ -1.19
SRGAP3-202ENST00000383836 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
SRGAP3-202ENST00000383836 KRTAP10-3P60369 221 aa7.62□□□□□ -1.19
SRGAP3-202ENST00000383836 RANBP2P49792 3224 aaKnown RBP7.61□□□□□ -1.19
SRGAP3-202ENST00000383836 PRUNE2Q8WUY3 3088 aa7.61□□□□□ -1.19
SRGAP3-202ENST00000383836 TENM1Q9UKZ4 2725 aa7.6□□□□□ -1.19
SRGAP3-202ENST00000383836 ZANQ9Y493 2812 aa7.59□□□□□ -1.19
SRGAP3-202ENST00000383836 WDFY4Q6ZS81 3184 aa7.59□□□□□ -1.19
SRGAP3-202ENST00000383836 PDZD2O15018 2839 aa7.59□□□□□ -1.19
SRGAP3-202ENST00000383836 A0A087X002 238 aa7.58□□□□□ -1.2
SRGAP3-202ENST00000383836 A6NN06 94 aa7.58□□□□□ -1.2
SRGAP3-202ENST00000383836 H1FX-AS1Q4G0G2 97 aa7.58□□□□□ -1.2
SRGAP3-202ENST00000383836 TNRC18O15417 2968 aaPredicted RBP7.57□□□□□ -1.2
SRGAP3-202ENST00000383836 Q6ZR54 194 aa7.57□□□□□ -1.2
SRGAP3-202ENST00000383836 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
SRGAP3-202ENST00000383836 CRYBG3Q68DQ2 2970 aa7.55□□□□□ -1.2
SRGAP3-202ENST00000383836 SPRR1BP22528 89 aa7.55□□□□□ -1.2
SRGAP3-202ENST00000383836 LAMA1P25391 3075 aa7.54□□□□□ -1.2
SRGAP3-202ENST00000383836 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.54□□□□□ -1.2
SRGAP3-202ENST00000383836 SPATA8Q6RVD6 105 aa7.53□□□□□ -1.2
SRGAP3-202ENST00000383836 KRTAP26-1Q6PEX3 210 aa7.53□□□□□ -1.2
SRGAP3-202ENST00000383836 SEC61BP60468 96 aaKnown RBP7.53□□□□□ -1.2
SRGAP3-202ENST00000383836 COL12A1Q99715 3063 aa7.52□□□□□ -1.21
SRGAP3-202ENST00000383836 R4GN34 69 aa7.51□□□□□ -1.21
SRGAP3-202ENST00000383836 USP34Q70CQ2 3546 aa7.5□□□□□ -1.21
SRGAP3-202ENST00000383836 TENM3Q9P273 2699 aa7.5□□□□□ -1.21
SRGAP3-202ENST00000383836 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
SRGAP3-202ENST00000383836 DMXL2Q8TDJ6 3036 aa7.49□□□□□ -1.21
SRGAP3-202ENST00000383836 MKI67P46013 3256 aaKnown RBP7.49□□□□□ -1.21
SRGAP3-202ENST00000383836 Q5VSD8 79 aa7.46□□□□□ -1.21
SRGAP3-202ENST00000383836 PLAC8Q9NZF1 115 aa7.46□□□□□ -1.21
SRGAP3-202ENST00000383836 XIRP2A4UGR9 3374 aa7.45□□□□□ -1.22
SRGAP3-202ENST00000383836 KRTAP29-1A8MX34 341 aaPredicted RBP7.45□□□□□ -1.22
SRGAP3-202ENST00000383836 DMXL1Q9Y485 3027 aa7.43□□□□□ -1.22
SRGAP3-202ENST00000383836 MXRA5Q9NR99 2828 aa7.42□□□□□ -1.22
SRGAP3-202ENST00000383836 BOD1L1Q8NFC6 3051 aa7.42□□□□□ -1.22
SRGAP3-202ENST00000383836 HTTP42858 3142 aa7.4□□□□□ -1.22
SRGAP3-202ENST00000383836 DCHS2Q6V1P9 2916 aa7.4□□□□□ -1.23
SRGAP3-202ENST00000383836 FBN2P35556 2912 aa7.38□□□□□ -1.23
SRGAP3-202ENST00000383836 LCE6AA0A183 80 aa7.37□□□□□ -1.23
SRGAP3-202ENST00000383836 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
SRGAP3-202ENST00000383836 ADGRG4Q8IZF6 3080 aa7.37□□□□□ -1.23
SRGAP3-202ENST00000383836 M0QZ58 72 aa7.35□□□□□ -1.23
SRGAP3-202ENST00000383836 REV3LO60673 3130 aa7.35□□□□□ -1.23
SRGAP3-202ENST00000383836 LAMA3Q16787 3333 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms