RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 ACYP2P14621 99 aa11.08□□□□□ -0.64
SGCB-201ENST00000381431 OBSCN-AS1Q96MR7 158 aa11.08□□□□□ -0.64
SGCB-201ENST00000381431 PRR15Q8IV56 129 aa11.08□□□□□ -0.64
SGCB-201ENST00000381431 A0A1B0GU69 56 aa11.07□□□□□ -0.64
SGCB-201ENST00000381431 A8MUN3 132 aa11.06□□□□□ -0.64
SGCB-201ENST00000381431 ZANQ9Y493 2812 aa11.06□□□□□ -0.64
SGCB-201ENST00000381431 CELSR2Q9HCU4 2923 aa11.06□□□□□ -0.64
SGCB-201ENST00000381431 TYMSOSQ8TAI1 123 aa11.06□□□□□ -0.64
SGCB-201ENST00000381431 LINC01600Q96MT4 127 aa11.05□□□□□ -0.64
SGCB-201ENST00000381431 MRPL34Q9BQ48 92 aaKnown RBP11.04□□□□□ -0.64
SGCB-201ENST00000381431 LAMA5O15230 3695 aa11.03□□□□□ -0.64
SGCB-201ENST00000381431 PLA2G2DQ9UNK4 145 aa11.02□□□□□ -0.64
SGCB-201ENST00000381431 IGLV8-61A0A075B6I0 122 aa11.02□□□□□ -0.65
SGCB-201ENST00000381431 Q8NDZ9 215 aa11.02□□□□□ -0.65
SGCB-201ENST00000381431 A0A087WTM6 91 aa11□□□□□ -0.65
SGCB-201ENST00000381431 C8orf17Q9NRJ1 99 aa10.99□□□□□ -0.65
SGCB-201ENST00000381431 ZNF861PO60384 105 aa10.99□□□□□ -0.65
SGCB-201ENST00000381431 PLA2G1BP04054 148 aaKnown RBP10.98□□□□□ -0.65
SGCB-201ENST00000381431 COA5Q86WW8 74 aa10.98□□□□□ -0.65
SGCB-201ENST00000381431 DMDP11532 3685 aa10.98□□□□□ -0.65
SGCB-201ENST00000381431 IGLV5-48A0A075B6I7 105 aa10.98□□□□□ -0.65
SGCB-201ENST00000381431 Q96NJ1 140 aa10.97□□□□□ -0.65
SGCB-201ENST00000381431 LINC00336Q6ZUF6 198 aa10.96□□□□□ -0.65
SGCB-201ENST00000381431 LOC101927531A0A1B0GV80 90 aa10.96□□□□□ -0.65
SGCB-201ENST00000381431 HIVEP1P15822 2718 aa10.95□□□□□ -0.66
SGCB-201ENST00000381431 DSCR10P59022 87 aa10.94□□□□□ -0.66
SGCB-201ENST00000381431 PSORS1C2Q9UIG4 136 aa10.94□□□□□ -0.66
SGCB-201ENST00000381431 FAM229AH3BQW9 127 aa10.94□□□□□ -0.66
SGCB-201ENST00000381431 WWC2-AS2Q96NR7 200 aa10.94□□□□□ -0.66
SGCB-201ENST00000381431 APLNQ9ULZ1 77 aa10.93□□□□□ -0.66
SGCB-201ENST00000381431 A0A1B0GVX0 72 aa10.92□□□□□ -0.66
SGCB-201ENST00000381431 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
SGCB-201ENST00000381431 ATP11AUNQ6ZP68 121 aa10.92□□□□□ -0.66
SGCB-201ENST00000381431 FLG2Q5D862 2391 aaPredicted RBP10.92□□□□□ -0.66
SGCB-201ENST00000381431 RELNP78509 3460 aa10.91□□□□□ -0.66
SGCB-201ENST00000381431 C8orf87E5RJ46 101 aa10.88□□□□□ -0.67
SGCB-201ENST00000381431 SPRR4Q96PI1 79 aa10.88□□□□□ -0.67
SGCB-201ENST00000381431 SSBP3-AS1Q7Z2R9 100 aa10.87□□□□□ -0.67
SGCB-201ENST00000381431 NIPBLQ6KC79 2804 aaeCLIP10.86□□□□□ -0.67
SGCB-201ENST00000381431 OCR1Q9BZK8 76 aa10.86□□□□□ -0.67
SGCB-201ENST00000381431 IGLV5-37A0A075B6J1 123 aa10.85□□□□□ -0.67
SGCB-201ENST00000381431 DCHS2Q6V1P9 2916 aa10.85□□□□□ -0.67
SGCB-201ENST00000381431 NF1P21359 2839 aa10.85□□□□□ -0.67
SGCB-201ENST00000381431 SMR3BP02814 79 aaPredicted RBP10.83□□□□□ -0.68
SGCB-201ENST00000381431 KMT2BQ9UMN6 2715 aaPredicted RBP10.82□□□□□ -0.68
SGCB-201ENST00000381431 IGLV7-43P04211 117 aa10.82□□□□□ -0.68
SGCB-201ENST00000381431 CYSTM1Q9H1C7 97 aa10.82□□□□□ -0.68
SGCB-201ENST00000381431 APCP25054 2843 aa10.8□□□□□ -0.68
SGCB-201ENST00000381431 WIPF1O43516 503 aa10.8□□□□□ -0.68
SGCB-201ENST00000381431 CSMD1Q96PZ7 3565 aa10.8□□□□□ -0.68
SGCB-201ENST00000381431 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.77□□□□□ -0.69
SGCB-201ENST00000381431 FBN2P35556 2912 aa10.76□□□□□ -0.69
SGCB-201ENST00000381431 CYP4F30PQ9H0H9 118 aa10.76□□□□□ -0.69
SGCB-201ENST00000381431 SMG1Q96Q15 3661 aaKnown RBP10.74□□□□□ -0.69
SGCB-201ENST00000381431 C9orf92A6NGG3 77 aa10.74□□□□□ -0.69
SGCB-201ENST00000381431 LINC00304Q8N9R0 145 aa10.73□□□□□ -0.69
SGCB-201ENST00000381431 CRYBG3Q68DQ2 2970 aa10.72□□□□□ -0.69
SGCB-201ENST00000381431 TNP2Q05952 138 aa10.72□□□□□ -0.69
SGCB-201ENST00000381431 SVEP1Q4LDE5 3571 aa10.71□□□□□ -0.69
SGCB-201ENST00000381431 DMBT1Q9UGM3 2413 aaPredicted RBP10.71□□□□□ -0.7
SGCB-201ENST00000381431 UQCR11O14957 56 aa10.7□□□□□ -0.7
SGCB-201ENST00000381431 PRR26Q8N8Z3 221 aa10.69□□□□□ -0.7
SGCB-201ENST00000381431 SPRR1AP35321 89 aa10.69□□□□□ -0.7
SGCB-201ENST00000381431 TENM4Q6N022 2769 aa10.67□□□□□ -0.7
SGCB-201ENST00000381431 SPANXA2-OT1Q8N9U9 137 aa10.66□□□□□ -0.7
SGCB-201ENST00000381431 KRTAP1-5Q9BYS1 174 aa10.66□□□□□ -0.7
SGCB-201ENST00000381431 KRTAP26-1Q6PEX3 210 aa10.65□□□□□ -0.7
SGCB-201ENST00000381431 SPENQ96T58 3664 aaKnown RBP10.65□□□□□ -0.71
SGCB-201ENST00000381431 Q8N1X5 172 aa10.61□□□□□ -0.71
SGCB-201ENST00000381431 MIR22HGQ0VDD5 57 aa10.59□□□□□ -0.71
SGCB-201ENST00000381431 HRNRQ86YZ3 2850 aaPredicted RBP10.59□□□□□ -0.71
SGCB-201ENST00000381431 CELSR1Q9NYQ6 3014 aa10.56□□□□□ -0.72
SGCB-201ENST00000381431 FAM229BQ4G0N7 80 aa10.56□□□□□ -0.72
SGCB-201ENST00000381431 MMP24-AS1A0A0U1RRL7 71 aa10.54□□□□□ -0.72
SGCB-201ENST00000381431 FP248Q71RG6 208 aaPredicted RBP10.53□□□□□ -0.72
SGCB-201ENST00000381431 Q5XG85 94 aa10.51□□□□□ -0.73
SGCB-201ENST00000381431 CD164Q04900 197 aa10.51□□□□□ -0.73
SGCB-201ENST00000381431 IGLV7-46A0A075B6I9 117 aa10.49□□□□□ -0.73
SGCB-201ENST00000381431 LINC00472Q9H8W2 130 aa10.49□□□□□ -0.73
SGCB-201ENST00000381431 Q1T7F1 81 aa10.49□□□□□ -0.73
SGCB-201ENST00000381431 Q8N9P0 234 aaPredicted RBP10.47□□□□□ -0.73
SGCB-201ENST00000381431 OXTP01178 125 aa10.46□□□□□ -0.73
SGCB-201ENST00000381431 HRES1P13985 223 aa10.46□□□□□ -0.73
SGCB-201ENST00000381431 SPRR1BP22528 89 aa10.46□□□□□ -0.74
SGCB-201ENST00000381431 PLAC8Q9NZF1 115 aa10.44□□□□□ -0.74
SGCB-201ENST00000381431 CDC42SE1Q9NRR8 79 aa10.42□□□□□ -0.74
SGCB-201ENST00000381431 MXRA5Q9NR99 2828 aa10.42□□□□□ -0.74
SGCB-201ENST00000381431 KTN1-AS1Q86SY8 53 aa10.41□□□□□ -0.74
SGCB-201ENST00000381431 KRTAP4-16G5E9R7 235 aaPredicted RBP10.4□□□□□ -0.74
SGCB-201ENST00000381431 PANO1I0J062 215 aa10.4□□□□□ -0.75
SGCB-201ENST00000381431 J3QL48 77 aa10.36□□□□□ -0.75
SGCB-201ENST00000381431 A0A0D9SG42 100 aa10.36□□□□□ -0.75
SGCB-201ENST00000381431 SPINT4Q6UDR6 99 aa10.35□□□□□ -0.75
SGCB-201ENST00000381431 TENM3Q9P273 2699 aa10.34□□□□□ -0.75
SGCB-201ENST00000381431 COX6B2Q6YFQ2 88 aa10.29□□□□□ -0.76
SGCB-201ENST00000381431 LCA10Q71F78 164 aa10.28□□□□□ -0.76
SGCB-201ENST00000381431 Q5W150 140 aa10.27□□□□□ -0.76
SGCB-201ENST00000381431 Q75L30 129 aa10.27□□□□□ -0.77
SGCB-201ENST00000381431 LINC01554Q52M75 96 aa10.27□□□□□ -0.77
SGCB-201ENST00000381431 LINC01558Q9Y6Z2 57 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms