RNA–Protein interactions for RNA: ENST00000381160.7

NPC1L1-202, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1L1, Length 4,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-202ENST00000381160 REG3GQ6UW15 175 aa7.17□□□□□ -1.26
NPC1L1-202ENST00000381160 PKD1L1Q8TDX9 2849 aa7.17□□□□□ -1.26
NPC1L1-202ENST00000381160 OXLD1Q5BKU9 147 aa7.16□□□□□ -1.26
NPC1L1-202ENST00000381160 ZCCHC13Q8WW36 166 aaKnown RBP7.16□□□□□ -1.26
NPC1L1-202ENST00000381160 LIMD2Q9BT23 127 aa7.16□□□□□ -1.26
NPC1L1-202ENST00000381160 PCOTHQ58A44 107 aa7.16□□□□□ -1.26
NPC1L1-202ENST00000381160 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
NPC1L1-202ENST00000381160 CASC10Q5T4H9 136 aa7.15□□□□□ -1.26
NPC1L1-202ENST00000381160 SPRR4Q96PI1 79 aa7.15□□□□□ -1.26
NPC1L1-202ENST00000381160 ATP11AUNQ6ZP68 121 aa7.15□□□□□ -1.27
NPC1L1-202ENST00000381160 ANK3Q12955 4377 aaKnown RBP7.15□□□□□ -1.27
NPC1L1-202ENST00000381160 LINC01556Q5JQF7 62 aa7.14□□□□□ -1.27
NPC1L1-202ENST00000381160 CYP4F30PQ9H0H9 118 aa7.14□□□□□ -1.27
NPC1L1-202ENST00000381160 TNP2Q05952 138 aa7.13□□□□□ -1.27
NPC1L1-202ENST00000381160 TENM1Q9UKZ4 2725 aa7.13□□□□□ -1.27
NPC1L1-202ENST00000381160 LCE6AA0A183 80 aa7.12□□□□□ -1.27
NPC1L1-202ENST00000381160 NOTCH1P46531 2555 aa7.1□□□□□ -1.27
NPC1L1-202ENST00000381160 Q8N9P0 234 aaPredicted RBP7.09□□□□□ -1.27
NPC1L1-202ENST00000381160 SPAG11AQ6PDA7 123 aa7.09□□□□□ -1.27
NPC1L1-202ENST00000381160 C7orf65Q6ZTY9 151 aa7.09□□□□□ -1.27
NPC1L1-202ENST00000381160 KRTAP4-16G5E9R7 235 aaPredicted RBP7.08□□□□□ -1.28
NPC1L1-202ENST00000381160 MAST4O15021 2626 aa7.08□□□□□ -1.28
NPC1L1-202ENST00000381160 COA5Q86WW8 74 aa7.08□□□□□ -1.28
NPC1L1-202ENST00000381160 H3BS24 57 aa7.07□□□□□ -1.28
NPC1L1-202ENST00000381160 LCA10Q71F78 164 aa7.07□□□□□ -1.28
NPC1L1-202ENST00000381160 H3BNG1 76 aa7.07□□□□□ -1.28
NPC1L1-202ENST00000381160 SPRR1AP35321 89 aa7.07□□□□□ -1.28
NPC1L1-202ENST00000381160 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
NPC1L1-202ENST00000381160 TRRAPQ9Y4A5 3859 aa7.05□□□□□ -1.28
NPC1L1-202ENST00000381160 TLX1NBP0CAT3 122 aa7.05□□□□□ -1.28
NPC1L1-202ENST00000381160 COL6A5A8TX70 2615 aa7.04□□□□□ -1.28
NPC1L1-202ENST00000381160 C8orf87E5RJ46 101 aa7.04□□□□□ -1.28
NPC1L1-202ENST00000381160 KRTAP7-1Q8IUC3 87 aa7.04□□□□□ -1.28
NPC1L1-202ENST00000381160 PLA2G2DQ9UNK4 145 aa7.04□□□□□ -1.28
NPC1L1-202ENST00000381160 PHF5AQ7RTV0 110 aaKnown RBP7.03□□□□□ -1.28
NPC1L1-202ENST00000381160 A8MWP4 228 aa7.02□□□□□ -1.29
NPC1L1-202ENST00000381160 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
NPC1L1-202ENST00000381160 CNBPP62633 177 aaKnown RBP7.02□□□□□ -1.29
NPC1L1-202ENST00000381160 IGLV9-49A0A0B4J1Y8 123 aa7.02□□□□□ -1.29
NPC1L1-202ENST00000381160 A6NN06 94 aa7.02□□□□□ -1.29
NPC1L1-202ENST00000381160 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
NPC1L1-202ENST00000381160 CDK2AP2O75956 126 aa7.01□□□□□ -1.29
NPC1L1-202ENST00000381160 CDC42SE1Q9NRR8 79 aa7.01□□□□□ -1.29
NPC1L1-202ENST00000381160 IGLV5-37A0A075B6J1 123 aa7.01□□□□□ -1.29
NPC1L1-202ENST00000381160 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
NPC1L1-202ENST00000381160 H3BPC8 53 aa7.01□□□□□ -1.29
NPC1L1-202ENST00000381160 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
NPC1L1-202ENST00000381160 Q75L30 129 aa7□□□□□ -1.29
NPC1L1-202ENST00000381160 NSD1Q96L73 2696 aaPredicted RBP6.99□□□□□ -1.29
NPC1L1-202ENST00000381160 MDFIQ99750 246 aa6.99□□□□□ -1.29
NPC1L1-202ENST00000381160 IGHV6-1A0A0B4J1U7 121 aa6.99□□□□□ -1.29
NPC1L1-202ENST00000381160 STAB1Q9NY15 2570 aa6.98□□□□□ -1.29
NPC1L1-202ENST00000381160 KRTAP29-1A8MX34 341 aaPredicted RBP6.98□□□□□ -1.29
NPC1L1-202ENST00000381160 SRRM2Q9UQ35 2752 aaKnown RBP6.98□□□□□ -1.29
NPC1L1-202ENST00000381160 KRTAP10-11P60412 298 aa6.98□□□□□ -1.29
NPC1L1-202ENST00000381160 MOBPQ13875 183 aa6.98□□□□□ -1.29
NPC1L1-202ENST00000381160 UBE2DNLQ8IWF7 75 aa6.97□□□□□ -1.29
NPC1L1-202ENST00000381160 PRAC1Q96KF2 57 aa6.97□□□□□ -1.29
NPC1L1-202ENST00000381160 NBEAL1Q6ZS30 2694 aa6.96□□□□□ -1.3
NPC1L1-202ENST00000381160 MGAM2Q2M2H8 2515 aa6.96□□□□□ -1.3
NPC1L1-202ENST00000381160 FBN1P35555 2871 aaKnown RBP6.93□□□□□ -1.3
NPC1L1-202ENST00000381160 IGLV7-46A0A075B6I9 117 aa6.93□□□□□ -1.3
NPC1L1-202ENST00000381160 C9orf163Q8N9P6 203 aa6.93□□□□□ -1.3
NPC1L1-202ENST00000381160 SPINK6Q6UWN8 80 aa6.92□□□□□ -1.3
NPC1L1-202ENST00000381160 LINC00472Q9H8W2 130 aa6.92□□□□□ -1.3
NPC1L1-202ENST00000381160 MMP24-AS1A0A0U1RRL7 71 aa6.92□□□□□ -1.3
NPC1L1-202ENST00000381160 LINC00313P59037 77 aa6.91□□□□□ -1.3
NPC1L1-202ENST00000381160 SPINK7P58062 85 aa6.9□□□□□ -1.3
NPC1L1-202ENST00000381160 IGLV8-61A0A075B6I0 122 aa6.9□□□□□ -1.31
NPC1L1-202ENST00000381160 KRTAP24-1Q3LI83 254 aa6.89□□□□□ -1.31
NPC1L1-202ENST00000381160 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
NPC1L1-202ENST00000381160 PRR26Q8N8Z3 221 aa6.88□□□□□ -1.31
NPC1L1-202ENST00000381160 TP53AIP1Q9HCN2 124 aa6.88□□□□□ -1.31
NPC1L1-202ENST00000381160 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
NPC1L1-202ENST00000381160 C8orf17Q9NRJ1 99 aa6.87□□□□□ -1.31
NPC1L1-202ENST00000381160 ANK2Q01484 3957 aa6.86□□□□□ -1.31
NPC1L1-202ENST00000381160 HRES1P13985 223 aa6.85□□□□□ -1.31
NPC1L1-202ENST00000381160 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
NPC1L1-202ENST00000381160 RETNLBQ9BQ08 111 aa6.84□□□□□ -1.31
NPC1L1-202ENST00000381160 ADM2Q7Z4H4 148 aa6.84□□□□□ -1.31
NPC1L1-202ENST00000381160 ANAPC11Q9NYG5 84 aa6.83□□□□□ -1.32
NPC1L1-202ENST00000381160 CSMD3Q7Z407 3707 aa6.83□□□□□ -1.32
NPC1L1-202ENST00000381160 KRTAP1-5Q9BYS1 174 aa6.82□□□□□ -1.32
NPC1L1-202ENST00000381160 MRPL34Q9BQ48 92 aaKnown RBP6.82□□□□□ -1.32
NPC1L1-202ENST00000381160 C14orf177Q52M58 125 aa6.81□□□□□ -1.32
NPC1L1-202ENST00000381160 K7EIL1 84 aa6.81□□□□□ -1.32
NPC1L1-202ENST00000381160 STAB2Q8WWQ8 2551 aa6.8□□□□□ -1.32
NPC1L1-202ENST00000381160 A0A1B0GVX0 72 aa6.8□□□□□ -1.32
NPC1L1-202ENST00000381160 COL7A1Q02388 2944 aa6.78□□□□□ -1.32
NPC1L1-202ENST00000381160 SPRR1BP22528 89 aa6.78□□□□□ -1.32
NPC1L1-202ENST00000381160 A0A087X002 238 aa6.76□□□□□ -1.33
NPC1L1-202ENST00000381160 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
NPC1L1-202ENST00000381160 A0A1B0GU69 56 aa6.75□□□□□ -1.33
NPC1L1-202ENST00000381160 CIRBP-AS1Q8TBR5 109 aa6.75□□□□□ -1.33
NPC1L1-202ENST00000381160 ACYP2P14621 99 aa6.74□□□□□ -1.33
NPC1L1-202ENST00000381160 PANO1I0J062 215 aa6.74□□□□□ -1.33
NPC1L1-202ENST00000381160 Q6ZR54 194 aa6.74□□□□□ -1.33
NPC1L1-202ENST00000381160 TENM2Q9NT68 2774 aa6.73□□□□□ -1.33
NPC1L1-202ENST00000381160 CMYA5Q8N3K9 4069 aa6.72□□□□□ -1.33
NPC1L1-202ENST00000381160 Q96NJ1 140 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms