RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 V9GYY9 64 aa12.34□□□□□ -0.43
FOXC1-201ENST00000380874 TENM2Q9NT68 2774 aa12.34□□□□□ -0.43
FOXC1-201ENST00000380874 APLNQ9ULZ1 77 aa12.34□□□□□ -0.43
FOXC1-201ENST00000380874 NBDYA0A0U1RRE5 68 aa12.33□□□□□ -0.44
FOXC1-201ENST00000380874 C1orf195Q5TG92 126 aa12.32□□□□□ -0.44
FOXC1-201ENST00000380874 OXTP01178 125 aa12.32□□□□□ -0.44
FOXC1-201ENST00000380874 LRCOL1A6NCL2 159 aa12.32□□□□□ -0.44
FOXC1-201ENST00000380874 HCG22E2RYF7 251 aa12.31□□□□□ -0.44
FOXC1-201ENST00000380874 MP68P56378 58 aa12.31□□□□□ -0.44
FOXC1-201ENST00000380874 NUPR2A6NF83 97 aa12.31□□□□□ -0.44
FOXC1-201ENST00000380874 TGP01266 2768 aa12.3□□□□□ -0.44
FOXC1-201ENST00000380874 CNBPP62633 177 aaKnown RBP12.29□□□□□ -0.44
FOXC1-201ENST00000380874 A0A1B0GW54 56 aa12.28□□□□□ -0.44
FOXC1-201ENST00000380874 OCR1Q9BZK8 76 aa12.27□□□□□ -0.44
FOXC1-201ENST00000380874 LINC00474Q9P2X8 69 aa12.27□□□□□ -0.45
FOXC1-201ENST00000380874 DSCR10P59022 87 aa12.27□□□□□ -0.45
FOXC1-201ENST00000380874 CDK2AP2O75956 126 aa12.26□□□□□ -0.45
FOXC1-201ENST00000380874 TNP2Q05952 138 aa12.25□□□□□ -0.45
FOXC1-201ENST00000380874 C9orf163Q8N9P6 203 aa12.25□□□□□ -0.45
FOXC1-201ENST00000380874 NDUFS5O43920 106 aa12.25□□□□□ -0.45
FOXC1-201ENST00000380874 NDUFB1O75438 58 aa12.25□□□□□ -0.45
FOXC1-201ENST00000380874 LINC00208Q96KT6 92 aa12.24□□□□□ -0.45
FOXC1-201ENST00000380874 SPRR4Q96PI1 79 aa12.24□□□□□ -0.45
FOXC1-201ENST00000380874 LINC00336Q6ZUF6 198 aa12.23□□□□□ -0.45
FOXC1-201ENST00000380874 CASC2Q6XLA1 102 aa12.21□□□□□ -0.45
FOXC1-201ENST00000380874 KRTAP11-1Q8IUC1 163 aa12.19□□□□□ -0.46
FOXC1-201ENST00000380874 PANO1I0J062 215 aa12.15□□□□□ -0.46
FOXC1-201ENST00000380874 SPINK6Q6UWN8 80 aa12.15□□□□□ -0.47
FOXC1-201ENST00000380874 ANAPC11Q9NYG5 84 aa12.13□□□□□ -0.47
FOXC1-201ENST00000380874 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.13□□□□□ -0.47
FOXC1-201ENST00000380874 Q5XG85 94 aa12.13□□□□□ -0.47
FOXC1-201ENST00000380874 H0Y9P7 68 aa12.11□□□□□ -0.47
FOXC1-201ENST00000380874 IGLV5-52A0A0A0MRZ9 124 aa12.1□□□□□ -0.47
FOXC1-201ENST00000380874 RTL8CO15255 209 aa12.1□□□□□ -0.47
FOXC1-201ENST00000380874 MOBPQ13875 183 aa12.1□□□□□ -0.47
FOXC1-201ENST00000380874 SRRM2Q9UQ35 2752 aaKnown RBP12.08□□□□□ -0.48
FOXC1-201ENST00000380874 IGHV6-1A0A0B4J1U7 121 aa12.08□□□□□ -0.48
FOXC1-201ENST00000380874 A0A087WTM6 91 aa12.07□□□□□ -0.48
FOXC1-201ENST00000380874 PRR15Q8IV56 129 aa12.05□□□□□ -0.48
FOXC1-201ENST00000380874 A8MWP4 228 aa12.04□□□□□ -0.48
FOXC1-201ENST00000380874 ZNF706Q9Y5V0 76 aaPredicted RBP12.04□□□□□ -0.48
FOXC1-201ENST00000380874 PSPHP1O15172 72 aa12.04□□□□□ -0.48
FOXC1-201ENST00000380874 C1orf134Q5TEV5 83 aa12.03□□□□□ -0.48
FOXC1-201ENST00000380874 SPTSSBQ8NFR3 76 aa12.02□□□□□ -0.48
FOXC1-201ENST00000380874 CSMD3Q7Z407 3707 aa12.02□□□□□ -0.48
FOXC1-201ENST00000380874 SEC61GP60059 68 aa12.02□□□□□ -0.49
FOXC1-201ENST00000380874 PCOTHQ58A44 107 aa12.02□□□□□ -0.49
FOXC1-201ENST00000380874 CIRBP-AS1Q8TBR5 109 aa12.02□□□□□ -0.49
FOXC1-201ENST00000380874 ANK2Q01484 3957 aa12.01□□□□□ -0.49
FOXC1-201ENST00000380874 FAM229BQ4G0N7 80 aa12.01□□□□□ -0.49
FOXC1-201ENST00000380874 C1orf64Q8NEQ6 169 aa12□□□□□ -0.49
FOXC1-201ENST00000380874 PSORS1C2Q9UIG4 136 aa12□□□□□ -0.49
FOXC1-201ENST00000380874 hDV103S1A0JD37 113 aa11.99□□□□□ -0.49
FOXC1-201ENST00000380874 FP248Q71RG6 208 aaPredicted RBP11.99□□□□□ -0.49
FOXC1-201ENST00000380874 IGLV8-61A0A075B6I0 122 aa11.98□□□□□ -0.49
FOXC1-201ENST00000380874 SPACA4Q8TDM5 124 aa11.96□□□□□ -0.5
FOXC1-201ENST00000380874 WWC2-AS2Q96NR7 200 aa11.94□□□□□ -0.5
FOXC1-201ENST00000380874 SPRR1BP22528 89 aa11.93□□□□□ -0.5
FOXC1-201ENST00000380874 PMAIP1Q13794 54 aa11.93□□□□□ -0.5
FOXC1-201ENST00000380874 HUWE1Q7Z6Z7 4374 aaKnown RBP11.92□□□□□ -0.5
FOXC1-201ENST00000380874 CHKB-CPT1BH3BT56 60 aa11.91□□□□□ -0.5
FOXC1-201ENST00000380874 Q6ZRN7 208 aaPredicted RBP11.91□□□□□ -0.5
FOXC1-201ENST00000380874 LINC00472Q9H8W2 130 aa11.91□□□□□ -0.5
FOXC1-201ENST00000380874 TRAV22A0A0B4J277 110 aa11.9□□□□□ -0.5
FOXC1-201ENST00000380874 ZNF861PO60384 105 aa11.88□□□□□ -0.51
FOXC1-201ENST00000380874 COL7A1Q02388 2944 aa11.84□□□□□ -0.51
FOXC1-201ENST00000380874 A6NED7 52 aa11.84□□□□□ -0.51
FOXC1-201ENST00000380874 C8orf17Q9NRJ1 99 aa11.83□□□□□ -0.52
FOXC1-201ENST00000380874 DMBT1Q9UGM3 2413 aaPredicted RBP11.82□□□□□ -0.52
FOXC1-201ENST00000380874 RETNLBQ9BQ08 111 aa11.81□□□□□ -0.52
FOXC1-201ENST00000380874 MMP24-AS1A0A0U1RRL7 71 aa11.8□□□□□ -0.52
FOXC1-201ENST00000380874 KRTAP29-1A8MX34 341 aaPredicted RBP11.8□□□□□ -0.52
FOXC1-201ENST00000380874 PRR15LQ9BU68 103 aa11.79□□□□□ -0.52
FOXC1-201ENST00000380874 ZCCHC13Q8WW36 166 aaKnown RBP11.79□□□□□ -0.52
FOXC1-201ENST00000380874 A0A1B0GVX0 72 aa11.77□□□□□ -0.53
FOXC1-201ENST00000380874 DNAH10Q8IVF4 4471 aa11.77□□□□□ -0.53
FOXC1-201ENST00000380874 H3BPC8 53 aa11.76□□□□□ -0.53
FOXC1-201ENST00000380874 KRTAP13-1Q8IUC0 172 aa11.76□□□□□ -0.53
FOXC1-201ENST00000380874 IGLV7-43P04211 117 aa11.75□□□□□ -0.53
FOXC1-201ENST00000380874 LCE6AA0A183 80 aa11.74□□□□□ -0.53
FOXC1-201ENST00000380874 TP53AIP1Q9HCN2 124 aa11.74□□□□□ -0.53
FOXC1-201ENST00000380874 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
FOXC1-201ENST00000380874 MRPL34Q9BQ48 92 aaKnown RBP11.73□□□□□ -0.53
FOXC1-201ENST00000380874 A8MUN3 132 aa11.72□□□□□ -0.53
FOXC1-201ENST00000380874 C4orf48Q5BLP8 95 aa11.69□□□□□ -0.54
FOXC1-201ENST00000380874 Q6ZR54 194 aa11.69□□□□□ -0.54
FOXC1-201ENST00000380874 CMYA5Q8N3K9 4069 aa11.68□□□□□ -0.54
FOXC1-201ENST00000380874 CYP4F30PQ9H0H9 118 aa11.67□□□□□ -0.54
FOXC1-201ENST00000380874 LIMD2Q9BT23 127 aa11.67□□□□□ -0.54
FOXC1-201ENST00000380874 COA5Q86WW8 74 aa11.65□□□□□ -0.54
FOXC1-201ENST00000380874 A0A087X002 238 aa11.64□□□□□ -0.55
FOXC1-201ENST00000380874 LINC00483Q53H64 154 aa11.64□□□□□ -0.55
FOXC1-201ENST00000380874 NOTCH2NLQ7Z3S9 236 aa11.64□□□□□ -0.55
FOXC1-201ENST00000380874 KRTAP10-2P60368 255 aa11.64□□□□□ -0.55
FOXC1-201ENST00000380874 SPAG11AQ6PDA7 123 aa11.62□□□□□ -0.55
FOXC1-201ENST00000380874 FLG2Q5D862 2391 aaPredicted RBP11.61□□□□□ -0.55
FOXC1-201ENST00000380874 Q96NJ1 140 aa11.61□□□□□ -0.55
FOXC1-201ENST00000380874 LYSTQ99698 3801 aa11.61□□□□□ -0.55
FOXC1-201ENST00000380874 SPANXA2-OT1Q8N9U9 137 aa11.6□□□□□ -0.55
FOXC1-201ENST00000380874 DNAH9Q9NYC9 4486 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms