RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 BDP1A6H8Y1 2624 aa2.84□□□□□ -1.96
PTCD2-202ENST00000380639 UTRNP46939 3433 aa2.83□□□□□ -1.96
PTCD2-202ENST00000380639 GOLGB1Q14789 3259 aaKnown RBP2.83□□□□□ -1.96
PTCD2-202ENST00000380639 USP9YO00507 2555 aaPredicted RBP2.83□□□□□ -1.96
PTCD2-202ENST00000380639 A0A096LNT2 108 aa2.82□□□□□ -1.96
PTCD2-202ENST00000380639 WWC2-AS2Q96NR7 200 aa2.82□□□□□ -1.96
PTCD2-202ENST00000380639 GIG44P09565 113 aaPredicted RBP2.82□□□□□ -1.96
PTCD2-202ENST00000380639 A0A087X002 238 aa2.81□□□□□ -1.96
PTCD2-202ENST00000380639 SRCAPQ6ZRS2 3230 aa2.81□□□□□ -1.96
PTCD2-202ENST00000380639 NOTCH2NLQ7Z3S9 236 aa2.8□□□□□ -1.96
PTCD2-202ENST00000380639 USP34Q70CQ2 3546 aa2.8□□□□□ -1.96
PTCD2-202ENST00000380639 CHD6Q8TD26 2715 aa2.8□□□□□ -1.96
PTCD2-202ENST00000380639 A0A0C4DFX4 3053 aa2.79□□□□□ -1.96
PTCD2-202ENST00000380639 USP24Q9UPU5 2620 aa2.79□□□□□ -1.96
PTCD2-202ENST00000380639 STAB2Q8WWQ8 2551 aa2.79□□□□□ -1.96
PTCD2-202ENST00000380639 KRTAP10-8P60410 259 aa2.79□□□□□ -1.96
PTCD2-202ENST00000380639 WDR87Q6ZQQ6 2873 aa2.78□□□□□ -1.96
PTCD2-202ENST00000380639 MUC22E2RYF6 1773 aaPredicted RBP2.78□□□□□ -1.96
PTCD2-202ENST00000380639 A0A087WTM6 91 aa2.76□□□□□ -1.97
PTCD2-202ENST00000380639 NSD1Q96L73 2696 aaPredicted RBP2.75□□□□□ -1.97
PTCD2-202ENST00000380639 K7EIL1 84 aa2.75□□□□□ -1.97
PTCD2-202ENST00000380639 SMR3AQ99954 134 aa2.75□□□□□ -1.97
PTCD2-202ENST00000380639 C10orf142B7Z368 130 aa2.74□□□□□ -1.97
PTCD2-202ENST00000380639 COL4A3Q01955 1670 aa2.73□□□□□ -1.97
PTCD2-202ENST00000380639 CENPFP49454 3210 aa2.73□□□□□ -1.97
PTCD2-202ENST00000380639 COL4A4P53420 1690 aaPredicted RBP2.72□□□□□ -1.97
PTCD2-202ENST00000380639 LINC00472Q9H8W2 130 aa2.72□□□□□ -1.97
PTCD2-202ENST00000380639 KRTAP10-9P60411 292 aa2.71□□□□□ -1.97
PTCD2-202ENST00000380639 INE1O15225 51 aa2.71□□□□□ -1.98
PTCD2-202ENST00000380639 DNAH12Q6ZR08 3092 aa2.71□□□□□ -1.98
PTCD2-202ENST00000380639 MGAM2Q2M2H8 2515 aa2.7□□□□□ -1.98
PTCD2-202ENST00000380639 SPRR1AP35321 89 aa2.7□□□□□ -1.98
PTCD2-202ENST00000380639 CENPEQ02224 2701 aa2.7□□□□□ -1.98
PTCD2-202ENST00000380639 PLAC8Q9NZF1 115 aa2.7□□□□□ -1.98
PTCD2-202ENST00000380639 ATRQ13535 2644 aa2.69□□□□□ -1.98
PTCD2-202ENST00000380639 DNAH14Q0VDD8 3507 aa2.68□□□□□ -1.98
PTCD2-202ENST00000380639 COL4A2P08572 1712 aa2.68□□□□□ -1.98
PTCD2-202ENST00000380639 ZFHX3Q15911 3703 aa2.66□□□□□ -1.98
PTCD2-202ENST00000380639 PIEZO2Q9H5I5 2752 aa2.65□□□□□ -1.98
PTCD2-202ENST00000380639 MGAQ8IWI9 3026 aa2.64□□□□□ -1.99
PTCD2-202ENST00000380639 KRTAP29-1A8MX34 341 aaPredicted RBP2.63□□□□□ -1.99
PTCD2-202ENST00000380639 Q6ZRN7 208 aaPredicted RBP2.63□□□□□ -1.99
PTCD2-202ENST00000380639 IGSF10Q6WRI0 2623 aa2.62□□□□□ -1.99
PTCD2-202ENST00000380639 LAMA2P24043 3122 aaKnown RBP2.61□□□□□ -1.99
PTCD2-202ENST00000380639 NBEAL1Q6ZS30 2694 aa2.61□□□□□ -1.99
PTCD2-202ENST00000380639 KRTAP12-2P59991 146 aa2.61□□□□□ -1.99
PTCD2-202ENST00000380639 CEP350Q5VT06 3117 aa2.6□□□□□ -1.99
PTCD2-202ENST00000380639 PRO2289Q9P1D8 64 aa2.59□□□□□ -1.99
PTCD2-202ENST00000380639 COL6A5A8TX70 2615 aa2.59□□□□□ -1.99
PTCD2-202ENST00000380639 H0YAA0 97 aa2.59□□□□□ -2
PTCD2-202ENST00000380639 WDFY3Q8IZQ1 3526 aa2.58□□□□□ -2
PTCD2-202ENST00000380639 REV3LO60673 3130 aa2.58□□□□□ -2
PTCD2-202ENST00000380639 PRRC2CQ9Y520 2896 aaKnown RBP2.58□□□□□ -2
PTCD2-202ENST00000380639 COL6A3P12111 3177 aa2.58□□□□□ -2
PTCD2-202ENST00000380639 XIRP2A4UGR9 3374 aa2.58□□□□□ -2
PTCD2-202ENST00000380639 GCN1Q92616 2671 aaKnown RBP2.57□□□□□ -2
PTCD2-202ENST00000380639 EP400Q96L91 3159 aa2.57□□□□□ -2
PTCD2-202ENST00000380639 C5orf42Q9H799 3197 aa2.57□□□□□ -2
PTCD2-202ENST00000380639 RANBP2P49792 3224 aaKnown RBP2.57□□□□□ -2
PTCD2-202ENST00000380639 SZT2Q5T011 3432 aa2.56□□□□□ -2
PTCD2-202ENST00000380639 VPS13AQ96RL7 3174 aa2.56□□□□□ -2
PTCD2-202ENST00000380639 UNC79Q9P2D8 2635 aa2.56□□□□□ -2
PTCD2-202ENST00000380639 CEP295Q9C0D2 2601 aa2.56□□□□□ -2
PTCD2-202ENST00000380639 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
PTCD2-202ENST00000380639 CDH23Q9H251 3354 aa2.55□□□□□ -2
PTCD2-202ENST00000380639 MAST4O15021 2626 aa2.54□□□□□ -2
PTCD2-202ENST00000380639 SPTBN5Q9NRC6 3674 aaKnown RBP2.54□□□□□ -2
PTCD2-202ENST00000380639 KRTAP10-11P60412 298 aa2.54□□□□□ -2
PTCD2-202ENST00000380639 UNC80Q8N2C7 3258 aa2.54□□□□□ -2
PTCD2-202ENST00000380639 DMDP11532 3685 aa2.54□□□□□ -2
PTCD2-202ENST00000380639 AKAP13Q12802 2813 aa2.53□□□□□ -2
PTCD2-202ENST00000380639 CFAP46Q8IYW2 2715 aa2.53□□□□□ -2
PTCD2-202ENST00000380639 LAMA3Q16787 3333 aa2.53□□□□□ -2
PTCD2-202ENST00000380639 MYO15AQ9UKN7 3530 aa2.52□□□□□ -2.01
PTCD2-202ENST00000380639 KRTAP15-1Q3LI76 137 aa2.52□□□□□ -2.01
PTCD2-202ENST00000380639 LCE6AA0A183 80 aa2.51□□□□□ -2.01
PTCD2-202ENST00000380639 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
PTCD2-202ENST00000380639 TEP1Q99973 2627 aaKnown RBP2.5□□□□□ -2.01
PTCD2-202ENST00000380639 MKI67P46013 3256 aaKnown RBP2.49□□□□□ -2.01
PTCD2-202ENST00000380639 BRCA2P51587 3418 aa2.49□□□□□ -2.01
PTCD2-202ENST00000380639 ANKRD11Q6UB99 2663 aaPredicted RBP2.49□□□□□ -2.01
PTCD2-202ENST00000380639 TPRXLQ17RH7 258 aa2.48□□□□□ -2.01
PTCD2-202ENST00000380639 A0A1B0GVY2 172 aa2.47□□□□□ -2.01
PTCD2-202ENST00000380639 CFAP54Q96N23 3096 aa2.46□□□□□ -2.02
PTCD2-202ENST00000380639 KRTAP10-3P60369 221 aa2.46□□□□□ -2.02
PTCD2-202ENST00000380639 XP32Q5T750 250 aa2.46□□□□□ -2.02
PTCD2-202ENST00000380639 UTP20O75691 2785 aaKnown RBP2.46□□□□□ -2.02
PTCD2-202ENST00000380639 KRTAP13-4Q3LI77 160 aa2.45□□□□□ -2.02
PTCD2-202ENST00000380639 TRIOO75962 3097 aa2.45□□□□□ -2.02
PTCD2-202ENST00000380639 SPENQ96T58 3664 aaKnown RBP2.45□□□□□ -2.02
PTCD2-202ENST00000380639 UBR5O95071 2799 aaPredicted RBP2.44□□□□□ -2.02
PTCD2-202ENST00000380639 KRTAP10-6P60371 365 aaPredicted RBP2.44□□□□□ -2.02
PTCD2-202ENST00000380639 VCANP13611 3396 aa2.44□□□□□ -2.02
PTCD2-202ENST00000380639 RPS29P62273 56 aaKnown RBP2.43□□□□□ -2.02
PTCD2-202ENST00000380639 FRYQ5TBA9 3013 aa2.43□□□□□ -2.02
PTCD2-202ENST00000380639 ASPMQ8IZT6 3477 aa2.43□□□□□ -2.02
PTCD2-202ENST00000380639 CELSR3Q9NYQ7 3312 aa2.43□□□□□ -2.02
PTCD2-202ENST00000380639 PRUNE2Q8WUY3 3088 aa2.42□□□□□ -2.02
PTCD2-202ENST00000380639 ITPR3Q14573 2671 aa2.42□□□□□ -2.02
PTCD2-202ENST00000380639 KRTAP10-10P60014 251 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms