RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 SPRR1BP22528 89 aa8.32□□□□□ -1.08
UPK1A-202ENST00000379013 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
UPK1A-202ENST00000379013 LAMTOR3Q9UHA4 124 aa8.32□□□□□ -1.08
UPK1A-202ENST00000379013 F8WEM9 126 aa8.31□□□□□ -1.08
UPK1A-202ENST00000379013 TMEM256-PLSCR3K7ERE1 68 aa8.31□□□□□ -1.08
UPK1A-202ENST00000379013 TCL1BO95988 128 aa8.31□□□□□ -1.08
UPK1A-202ENST00000379013 CRYGAP11844 174 aa8.31□□□□□ -1.08
UPK1A-202ENST00000379013 GTF2H5Q6ZYL4 71 aa8.31□□□□□ -1.08
UPK1A-202ENST00000379013 DEFB105AQ8NG35 78 aa8.31□□□□□ -1.08
UPK1A-202ENST00000379013 SPCS1Q9Y6A9 102 aa8.31□□□□□ -1.08
UPK1A-202ENST00000379013 ST20-AS1Q8NBB2 130 aa8.3□□□□□ -1.08
UPK1A-202ENST00000379013 KRTAP1-4P0C5Y4 121 aa8.27□□□□□ -1.09
UPK1A-202ENST00000379013 LINC01600Q96MT4 127 aa8.26□□□□□ -1.09
UPK1A-202ENST00000379013 K7EP34 96 aa8.25□□□□□ -1.09
UPK1A-202ENST00000379013 LINC01547P58512 204 aaPredicted RBP8.25□□□□□ -1.09
UPK1A-202ENST00000379013 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
UPK1A-202ENST00000379013 Q8N377 158 aa8.25□□□□□ -1.09
UPK1A-202ENST00000379013 C9JAW5 83 aa8.24□□□□□ -1.09
UPK1A-202ENST00000379013 UBE2V1Q13404 147 aa8.24□□□□□ -1.09
UPK1A-202ENST00000379013 C9orf153Q5TBE3 101 aa8.24□□□□□ -1.09
UPK1A-202ENST00000379013 Q8NBF4 154 aa8.24□□□□□ -1.09
UPK1A-202ENST00000379013 H3BMG7 143 aa8.23□□□□□ -1.09
UPK1A-202ENST00000379013 H3BT86 120 aa8.23□□□□□ -1.09
UPK1A-202ENST00000379013 TYMSOSQ8TAI1 123 aa8.23□□□□□ -1.09
UPK1A-202ENST00000379013 RNF213Q63HN8 5207 aa8.22□□□□□ -1.09
UPK1A-202ENST00000379013 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
UPK1A-202ENST00000379013 BAALC-AS2P0C853 105 aa8.22□□□□□ -1.09
UPK1A-202ENST00000379013 NDUFV3P56181 108 aaKnown RBP8.22□□□□□ -1.09
UPK1A-202ENST00000379013 Q6JHZ5 121 aa8.21□□□□□ -1.1
UPK1A-202ENST00000379013 SSBP3-AS1Q7Z2R9 100 aa8.21□□□□□ -1.1
UPK1A-202ENST00000379013 A0A087X002 238 aa8.2□□□□□ -1.1
UPK1A-202ENST00000379013 MOBPQ13875 183 aa8.2□□□□□ -1.1
UPK1A-202ENST00000379013 ANKRD29Q8N6D5 301 aa8.2□□□□□ -1.1
UPK1A-202ENST00000379013 ANAPC11Q9NYG5 84 aa8.2□□□□□ -1.1
UPK1A-202ENST00000379013 LPAP08519 4548 aa8.2□□□□□ -1.1
UPK1A-202ENST00000379013 JMJD7-PLA2G4BH0Y9G9 81 aa8.19□□□□□ -1.1
UPK1A-202ENST00000379013 C21orf62-AS1Q17RA5 79 aa8.19□□□□□ -1.1
UPK1A-202ENST00000379013 PRR26Q8N8Z3 221 aa8.19□□□□□ -1.1
UPK1A-202ENST00000379013 SMIM29Q86T20 159 aa8.18□□□□□ -1.1
UPK1A-202ENST00000379013 IGLV8-61A0A075B6I0 122 aa8.17□□□□□ -1.1
UPK1A-202ENST00000379013 C4orf48Q5BLP8 95 aa8.17□□□□□ -1.1
UPK1A-202ENST00000379013 C3orf22Q8N5N4 141 aa8.17□□□□□ -1.1
UPK1A-202ENST00000379013 F8W1H4 67 aa8.16□□□□□ -1.1
UPK1A-202ENST00000379013 SPAG11AQ6PDA7 123 aa8.16□□□□□ -1.1
UPK1A-202ENST00000379013 RBM3P98179 157 aaKnown RBP8.15□□□□□ -1.1
UPK1A-202ENST00000379013 KRTAP13-2Q52LG2 175 aa8.15□□□□□ -1.1
UPK1A-202ENST00000379013 DSCR8Q96T75 97 aa8.15□□□□□ -1.1
UPK1A-202ENST00000379013 PDE6GP18545 87 aa8.14□□□□□ -1.11
UPK1A-202ENST00000379013 CD164Q04900 197 aa8.13□□□□□ -1.11
UPK1A-202ENST00000379013 LINC00304Q8N9R0 145 aa8.13□□□□□ -1.11
UPK1A-202ENST00000379013 MTURNQ8N3F0 131 aa8.11□□□□□ -1.11
UPK1A-202ENST00000379013 A0A1B0GV90 55 aa8.1□□□□□ -1.11
UPK1A-202ENST00000379013 SPINK1P00995 79 aa8.1□□□□□ -1.11
UPK1A-202ENST00000379013 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.11
UPK1A-202ENST00000379013 IGFL1Q6UW32 110 aa8.09□□□□□ -1.11
UPK1A-202ENST00000379013 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
UPK1A-202ENST00000379013 TEN1Q86WV5 123 aa8.08□□□□□ -1.12
UPK1A-202ENST00000379013 PRO0461Q9UI25 63 aa8.08□□□□□ -1.12
UPK1A-202ENST00000379013 TRBV7-4A0A0J9YYF1 115 aa8.07□□□□□ -1.12
UPK1A-202ENST00000379013 Q6Q795 121 aa8.07□□□□□ -1.12
UPK1A-202ENST00000379013 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
UPK1A-202ENST00000379013 A0A1B0GV72 72 aa8.06□□□□□ -1.12
UPK1A-202ENST00000379013 A0A1B0GW54 56 aa8.06□□□□□ -1.12
UPK1A-202ENST00000379013 OBSCN-AS1Q96MR7 158 aa8.06□□□□□ -1.12
UPK1A-202ENST00000379013 SS18L2Q9UHA2 77 aa8.05□□□□□ -1.12
UPK1A-202ENST00000379013 CCKP06307 115 aa8.04□□□□□ -1.12
UPK1A-202ENST00000379013 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
UPK1A-202ENST00000379013 C14orf132Q9NPU4 83 aa8.03□□□□□ -1.12
UPK1A-202ENST00000379013 TRBV7-7A0A0K0K1E9 115 aa8.02□□□□□ -1.13
UPK1A-202ENST00000379013 VPS25Q9BRG1 176 aa8.02□□□□□ -1.13
UPK1A-202ENST00000379013 HRCT1Q6UXD1 115 aa8.01□□□□□ -1.13
UPK1A-202ENST00000379013 ETDBQ3ZM63 59 aa8□□□□□ -1.13
UPK1A-202ENST00000379013 Q5XG85 94 aa8□□□□□ -1.13
UPK1A-202ENST00000379013 Q6ZQT0 140 aa8□□□□□ -1.13
UPK1A-202ENST00000379013 A0A1W2PNM2 257 aa7.97□□□□□ -1.13
UPK1A-202ENST00000379013 MUC2Q02817 5179 aa7.96□□□□□ -1.14
UPK1A-202ENST00000379013 A0A087WSZ3 146 aa7.95□□□□□ -1.14
UPK1A-202ENST00000379013 A0A0G2JQZ4 141 aa7.95□□□□□ -1.14
UPK1A-202ENST00000379013 ASB16-AS1Q495Z4 193 aa7.95□□□□□ -1.14
UPK1A-202ENST00000379013 J3QR89 54 aa7.92□□□□□ -1.14
UPK1A-202ENST00000379013 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
UPK1A-202ENST00000379013 ACYP1P07311 99 aa7.89□□□□□ -1.15
UPK1A-202ENST00000379013 FAM240AA0A1B0GVK7 77 aa7.87□□□□□ -1.15
UPK1A-202ENST00000379013 NREPQ16612 68 aa7.87□□□□□ -1.15
UPK1A-202ENST00000379013 UBL5Q9BZL1 73 aa7.87□□□□□ -1.15
UPK1A-202ENST00000379013 J3KT08 172 aa7.86□□□□□ -1.15
UPK1A-202ENST00000379013 PRR4Q16378 134 aa7.83□□□□□ -1.16
UPK1A-202ENST00000379013 C1orf195Q5TG92 126 aa7.83□□□□□ -1.16
UPK1A-202ENST00000379013 RETNLBQ9BQ08 111 aa7.82□□□□□ -1.16
UPK1A-202ENST00000379013 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
UPK1A-202ENST00000379013 SIGMAR1Q99720 223 aa7.81□□□□□ -1.16
UPK1A-202ENST00000379013 IGLV7-46A0A075B6I9 117 aa7.8□□□□□ -1.16
UPK1A-202ENST00000379013 IGKV4-1P06312 121 aa7.8□□□□□ -1.16
UPK1A-202ENST00000379013 LINC00472Q9H8W2 130 aa7.8□□□□□ -1.16
UPK1A-202ENST00000379013 K7ERU9 68 aa7.79□□□□□ -1.16
UPK1A-202ENST00000379013 NDUFB1O75438 58 aa7.79□□□□□ -1.16
UPK1A-202ENST00000379013 Q6ZVQ6 151 aa7.79□□□□□ -1.16
UPK1A-202ENST00000379013 Q96NJ1 140 aa7.78□□□□□ -1.16
UPK1A-202ENST00000379013 LINC00846Q9NV44 126 aa7.78□□□□□ -1.16
UPK1A-202ENST00000379013 BPY2O14599 106 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms