RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 FREM2Q5SZK8 3169 aa13.31□□□□□ -0.28
SKI-201ENST00000378536 PLAC8Q9NZF1 115 aa13.3□□□□□ -0.28
SKI-201ENST00000378536 NOTCH1P46531 2555 aa13.3□□□□□ -0.28
SKI-201ENST00000378536 ITPR1Q14643 2758 aa13.29□□□□□ -0.28
SKI-201ENST00000378536 KRTAP26-1Q6PEX3 210 aa13.28□□□□□ -0.28
SKI-201ENST00000378536 OBSCN-AS1Q96MR7 158 aa13.28□□□□□ -0.28
SKI-201ENST00000378536 UBR5O95071 2799 aaPredicted RBP13.28□□□□□ -0.28
SKI-201ENST00000378536 UTP20O75691 2785 aaKnown RBP13.27□□□□□ -0.29
SKI-201ENST00000378536 PSPHP1O15172 72 aa13.26□□□□□ -0.29
SKI-201ENST00000378536 ITPR2Q14571 2701 aa13.26□□□□□ -0.29
SKI-201ENST00000378536 LRBAP50851 2863 aa13.26□□□□□ -0.29
SKI-201ENST00000378536 USP34Q70CQ2 3546 aa13.26□□□□□ -0.29
SKI-201ENST00000378536 Q8NDZ9 215 aa13.26□□□□□ -0.29
SKI-201ENST00000378536 C9orf92A6NGG3 77 aa13.25□□□□□ -0.29
SKI-201ENST00000378536 SPRR1AP35321 89 aa13.19□□□□□ -0.3
SKI-201ENST00000378536 LINC01600Q96MT4 127 aa13.19□□□□□ -0.3
SKI-201ENST00000378536 LCE6AA0A183 80 aa13.17□□□□□ -0.3
SKI-201ENST00000378536 SPEGQ15772 3267 aa13.17□□□□□ -0.3
SKI-201ENST00000378536 CD164Q04900 197 aa13.16□□□□□ -0.3
SKI-201ENST00000378536 APCP25054 2843 aa13.13□□□□□ -0.31
SKI-201ENST00000378536 HIVEP1P15822 2718 aa13.12□□□□□ -0.31
SKI-201ENST00000378536 FAM229BQ4G0N7 80 aa13.12□□□□□ -0.31
SKI-201ENST00000378536 NBEAQ8NFP9 2946 aa13.12□□□□□ -0.31
SKI-201ENST00000378536 KALRNO60229 2985 aa13.11□□□□□ -0.31
SKI-201ENST00000378536 TACC2O95359 2948 aa13.11□□□□□ -0.31
SKI-201ENST00000378536 A0A1B0GU69 56 aa13.11□□□□□ -0.31
SKI-201ENST00000378536 NBEAL2Q6ZNJ1 2754 aa13.11□□□□□ -0.31
SKI-201ENST00000378536 PRR26Q8N8Z3 221 aa13.11□□□□□ -0.31
SKI-201ENST00000378536 Q6ZR54 194 aa13.04□□□□□ -0.32
SKI-201ENST00000378536 PRO0628Q9UI54 55 aa13.04□□□□□ -0.32
SKI-201ENST00000378536 KRTAP10-2P60368 255 aa13.03□□□□□ -0.32
SKI-201ENST00000378536 KRTAP10-1P60331 282 aa13.01□□□□□ -0.33
SKI-201ENST00000378536 ZZEF1O43149 2961 aa13□□□□□ -0.33
SKI-201ENST00000378536 KLKP1Q107X0 134 aa13□□□□□ -0.33
SKI-201ENST00000378536 RPS28P62857 69 aaKnown RBP13□□□□□ -0.33
SKI-201ENST00000378536 KMT2BQ9UMN6 2715 aaPredicted RBP12.99□□□□□ -0.33
SKI-201ENST00000378536 KRTAP21-3Q3LHN1 58 aa12.99□□□□□ -0.33
SKI-201ENST00000378536 SPRR1BP22528 89 aa12.98□□□□□ -0.33
SKI-201ENST00000378536 COX6B2Q6YFQ2 88 aa12.97□□□□□ -0.33
SKI-201ENST00000378536 NSD1Q96L73 2696 aaPredicted RBP12.96□□□□□ -0.33
SKI-201ENST00000378536 LOC400499M0QZD8 3231 aa12.96□□□□□ -0.34
SKI-201ENST00000378536 COA5Q86WW8 74 aa12.94□□□□□ -0.34
SKI-201ENST00000378536 MYO15AQ9UKN7 3530 aa12.92□□□□□ -0.34
SKI-201ENST00000378536 IGLV8-61A0A075B6I0 122 aa12.9□□□□□ -0.34
SKI-201ENST00000378536 HRNRQ86YZ3 2850 aaPredicted RBP12.9□□□□□ -0.34
SKI-201ENST00000378536 IGLV7-46A0A075B6I9 117 aa12.89□□□□□ -0.35
SKI-201ENST00000378536 PANO1I0J062 215 aa12.87□□□□□ -0.35
SKI-201ENST00000378536 C4orf26Q17RF5 130 aa12.86□□□□□ -0.35
SKI-201ENST00000378536 Q5VSD8 79 aa12.85□□□□□ -0.35
SKI-201ENST00000378536 NBEAL1Q6ZS30 2694 aa12.84□□□□□ -0.35
SKI-201ENST00000378536 RBM12B-AS1Q9P1G2 102 aa12.83□□□□□ -0.36
SKI-201ENST00000378536 H7BZZ5 65 aa12.82□□□□□ -0.36
SKI-201ENST00000378536 Q6ZRN7 208 aaPredicted RBP12.8□□□□□ -0.36
SKI-201ENST00000378536 OCR1Q9BZK8 76 aa12.8□□□□□ -0.36
SKI-201ENST00000378536 ZANQ9Y493 2812 aa12.79□□□□□ -0.36
SKI-201ENST00000378536 CFAP47Q6ZTR5 3102 aa12.78□□□□□ -0.36
SKI-201ENST00000378536 KRTAP4-16G5E9R7 235 aaPredicted RBP12.78□□□□□ -0.36
SKI-201ENST00000378536 LINC00483Q53H64 154 aa12.75□□□□□ -0.37
SKI-201ENST00000378536 MMP24-AS1A0A0U1RRL7 71 aa12.74□□□□□ -0.37
SKI-201ENST00000378536 SPANXA2-OT1Q8N9U9 137 aa12.74□□□□□ -0.37
SKI-201ENST00000378536 LINC00472Q9H8W2 130 aa12.73□□□□□ -0.37
SKI-201ENST00000378536 Q6ZSA8 131 aa12.72□□□□□ -0.37
SKI-201ENST00000378536 Q8N1X5 172 aa12.71□□□□□ -0.37
SKI-201ENST00000378536 A8MUN3 132 aa12.64□□□□□ -0.39
SKI-201ENST00000378536 CELSR2Q9HCU4 2923 aa12.63□□□□□ -0.39
SKI-201ENST00000378536 NIPBLQ6KC79 2804 aaeCLIP12.63□□□□□ -0.393e-6■■■□□ 16.6
SKI-201ENST00000378536 ZCCHC13Q8WW36 166 aaKnown RBP12.61□□□□□ -0.39
SKI-201ENST00000378536 TENM4Q6N022 2769 aa12.61□□□□□ -0.39
SKI-201ENST00000378536 CYP4F30PQ9H0H9 118 aa12.61□□□□□ -0.39
SKI-201ENST00000378536 UQCR11O14957 56 aa12.59□□□□□ -0.39
SKI-201ENST00000378536 CRYBG3Q68DQ2 2970 aa12.58□□□□□ -0.4
SKI-201ENST00000378536 KRTAP11-1Q8IUC1 163 aa12.56□□□□□ -0.4
SKI-201ENST00000378536 KRTAP7-1Q8IUC3 87 aa12.54□□□□□ -0.4
SKI-201ENST00000378536 HRES1P13985 223 aa12.53□□□□□ -0.4
SKI-201ENST00000378536 A0A087X002 238 aa12.51□□□□□ -0.41
SKI-201ENST00000378536 SPINT4Q6UDR6 99 aa12.49□□□□□ -0.41
SKI-201ENST00000378536 STAB2Q8WWQ8 2551 aa12.48□□□□□ -0.41
SKI-201ENST00000378536 RELNP78509 3460 aa12.47□□□□□ -0.41
SKI-201ENST00000378536 Q5W150 140 aa12.45□□□□□ -0.42
SKI-201ENST00000378536 MIR22HGQ0VDD5 57 aa12.45□□□□□ -0.42
SKI-201ENST00000378536 Q8N9P0 234 aaPredicted RBP12.45□□□□□ -0.42
SKI-201ENST00000378536 DMDP11532 3685 aa12.43□□□□□ -0.42
SKI-201ENST00000378536 DCHS2Q6V1P9 2916 aa12.43□□□□□ -0.42
SKI-201ENST00000378536 ASH1LQ9NR48 2969 aaKnown RBP12.42□□□□□ -0.42
SKI-201ENST00000378536 FBN2P35556 2912 aa12.41□□□□□ -0.42
SKI-201ENST00000378536 MUC3AQ02505 3323 aa12.4□□□□□ -0.42
SKI-201ENST00000378536 FP248Q71RG6 208 aaPredicted RBP12.39□□□□□ -0.43
SKI-201ENST00000378536 LAMA5O15230 3695 aa12.38□□□□□ -0.43
SKI-201ENST00000378536 SEC61BP60468 96 aaKnown RBP12.37□□□□□ -0.43
SKI-201ENST00000378536 SPINK7P58062 85 aa12.37□□□□□ -0.43
SKI-201ENST00000378536 NF1P21359 2839 aa12.35□□□□□ -0.43
SKI-201ENST00000378536 KRTAP13-1Q8IUC0 172 aa12.35□□□□□ -0.43
SKI-201ENST00000378536 WDFY3Q8IZQ1 3526 aa12.34□□□□□ -0.43
SKI-201ENST00000378536 LINC01554Q52M75 96 aa12.28□□□□□ -0.44
SKI-201ENST00000378536 OXTP01178 125 aa12.27□□□□□ -0.45
SKI-201ENST00000378536 ASPMQ8IZT6 3477 aa12.27□□□□□ -0.45
SKI-201ENST00000378536 RPS29P62273 56 aaKnown RBP12.26□□□□□ -0.45
SKI-201ENST00000378536 DCHS1Q96JQ0 3298 aa12.26□□□□□ -0.45
SKI-201ENST00000378536 ASB16-AS1Q495Z4 193 aa12.26□□□□□ -0.45
SKI-201ENST00000378536 CRIPTQ9P021 101 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms