RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 CDK2AP2O75956 126 aa6.8□□□□□ -1.32
ARHGEF39-201ENST00000378387 C15orf56Q8N910 161 aa6.8□□□□□ -1.32
ARHGEF39-201ENST00000378387 IGFL1Q6UW32 110 aa6.8□□□□□ -1.32
ARHGEF39-201ENST00000378387 MDFIQ99750 246 aa6.79□□□□□ -1.32
ARHGEF39-201ENST00000378387 REG3GQ6UW15 175 aa6.78□□□□□ -1.32
ARHGEF39-201ENST00000378387 A0A1B0GW54 56 aa6.78□□□□□ -1.32
ARHGEF39-201ENST00000378387 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
ARHGEF39-201ENST00000378387 NSD1Q96L73 2696 aaPredicted RBP6.76□□□□□ -1.33
ARHGEF39-201ENST00000378387 INAFM1C9JVW0 142 aa6.75□□□□□ -1.33
ARHGEF39-201ENST00000378387 SPINK7P58062 85 aa6.75□□□□□ -1.33
ARHGEF39-201ENST00000378387 MOBPQ13875 183 aa6.75□□□□□ -1.33
ARHGEF39-201ENST00000378387 Q75L30 129 aa6.74□□□□□ -1.33
ARHGEF39-201ENST00000378387 SPRR4Q96PI1 79 aa6.74□□□□□ -1.33
ARHGEF39-201ENST00000378387 IGLV1-50A0A075B6I6 118 aa6.74□□□□□ -1.33
ARHGEF39-201ENST00000378387 PDZD2O15018 2839 aa6.74□□□□□ -1.33
ARHGEF39-201ENST00000378387 H3BS24 57 aa6.73□□□□□ -1.33
ARHGEF39-201ENST00000378387 IGHV6-1A0A0B4J1U7 121 aa6.73□□□□□ -1.33
ARHGEF39-201ENST00000378387 Q8NAQ8 132 aa6.73□□□□□ -1.33
ARHGEF39-201ENST00000378387 LCE6AA0A183 80 aa6.73□□□□□ -1.33
ARHGEF39-201ENST00000378387 SPANXA2-OT1Q8N9U9 137 aa6.73□□□□□ -1.33
ARHGEF39-201ENST00000378387 DEFB131BA0A096LNP1 70 aa6.72□□□□□ -1.33
ARHGEF39-201ENST00000378387 IGLV9-49A0A0B4J1Y8 123 aa6.72□□□□□ -1.33
ARHGEF39-201ENST00000378387 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.34
ARHGEF39-201ENST00000378387 C8orf87E5RJ46 101 aa6.71□□□□□ -1.34
ARHGEF39-201ENST00000378387 H3BPC8 53 aa6.71□□□□□ -1.34
ARHGEF39-201ENST00000378387 A6NN06 94 aa6.7□□□□□ -1.34
ARHGEF39-201ENST00000378387 SPINK6Q6UWN8 80 aa6.7□□□□□ -1.34
ARHGEF39-201ENST00000378387 LINC00313P59037 77 aa6.7□□□□□ -1.34
ARHGEF39-201ENST00000378387 PHF5AQ7RTV0 110 aaKnown RBP6.69□□□□□ -1.34
ARHGEF39-201ENST00000378387 VWFP04275 2813 aa6.69□□□□□ -1.34
ARHGEF39-201ENST00000378387 A8MWP4 228 aa6.68□□□□□ -1.34
ARHGEF39-201ENST00000378387 CASC10Q5T4H9 136 aa6.68□□□□□ -1.34
ARHGEF39-201ENST00000378387 CNBPP62633 177 aaKnown RBP6.68□□□□□ -1.34
ARHGEF39-201ENST00000378387 PKD1L1Q8TDX9 2849 aa6.68□□□□□ -1.34
ARHGEF39-201ENST00000378387 TNP2Q05952 138 aa6.67□□□□□ -1.34
ARHGEF39-201ENST00000378387 ADM2Q7Z4H4 148 aa6.66□□□□□ -1.34
ARHGEF39-201ENST00000378387 RETNLBQ9BQ08 111 aa6.66□□□□□ -1.34
ARHGEF39-201ENST00000378387 IGLV7-46A0A075B6I9 117 aa6.65□□□□□ -1.34
ARHGEF39-201ENST00000378387 NBPF19A0A087WUL8 3843 aa6.65□□□□□ -1.35
ARHGEF39-201ENST00000378387 OXLD1Q5BKU9 147 aa6.64□□□□□ -1.35
ARHGEF39-201ENST00000378387 IGLV8-61A0A075B6I0 122 aa6.63□□□□□ -1.35
ARHGEF39-201ENST00000378387 LINC01556Q5JQF7 62 aa6.62□□□□□ -1.35
ARHGEF39-201ENST00000378387 LINC01558Q9Y6Z2 57 aa6.62□□□□□ -1.35
ARHGEF39-201ENST00000378387 TENM4Q6N022 2769 aa6.62□□□□□ -1.35
ARHGEF39-201ENST00000378387 SRRM2Q9UQ35 2752 aaKnown RBP6.62□□□□□ -1.35
ARHGEF39-201ENST00000378387 KRTAP10-3P60369 221 aa6.61□□□□□ -1.35
ARHGEF39-201ENST00000378387 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
ARHGEF39-201ENST00000378387 A0A1B0GU69 56 aa6.61□□□□□ -1.35
ARHGEF39-201ENST00000378387 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
ARHGEF39-201ENST00000378387 KRTAP29-1A8MX34 341 aaPredicted RBP6.61□□□□□ -1.35
ARHGEF39-201ENST00000378387 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
ARHGEF39-201ENST00000378387 HRES1P13985 223 aa6.6□□□□□ -1.35
ARHGEF39-201ENST00000378387 UBE2DNLQ8IWF7 75 aa6.6□□□□□ -1.35
ARHGEF39-201ENST00000378387 C9orf163Q8N9P6 203 aa6.6□□□□□ -1.35
ARHGEF39-201ENST00000378387 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.36
ARHGEF39-201ENST00000378387 SPRR1AP35321 89 aa6.58□□□□□ -1.36
ARHGEF39-201ENST00000378387 TP53AIP1Q9HCN2 124 aa6.58□□□□□ -1.36
ARHGEF39-201ENST00000378387 AKAP9Q99996 3911 aa6.57□□□□□ -1.36
ARHGEF39-201ENST00000378387 MMP24-AS1A0A0U1RRL7 71 aa6.56□□□□□ -1.36
ARHGEF39-201ENST00000378387 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
ARHGEF39-201ENST00000378387 STAB2Q8WWQ8 2551 aa6.54□□□□□ -1.36
ARHGEF39-201ENST00000378387 SPINK1P00995 79 aa6.54□□□□□ -1.36
ARHGEF39-201ENST00000378387 ACYP2P14621 99 aa6.54□□□□□ -1.36
ARHGEF39-201ENST00000378387 FLG2Q5D862 2391 aaPredicted RBP6.54□□□□□ -1.36
ARHGEF39-201ENST00000378387 LINC00472Q9H8W2 130 aa6.54□□□□□ -1.36
ARHGEF39-201ENST00000378387 TLX1NBP0CAT3 122 aa6.53□□□□□ -1.36
ARHGEF39-201ENST00000378387 PLA2G2DQ9UNK4 145 aa6.53□□□□□ -1.36
ARHGEF39-201ENST00000378387 OTOGQ6ZRI0 2925 aa6.53□□□□□ -1.36
ARHGEF39-201ENST00000378387 K7EIL1 84 aa6.53□□□□□ -1.36
ARHGEF39-201ENST00000378387 KRTAP7-1Q8IUC3 87 aa6.53□□□□□ -1.36
ARHGEF39-201ENST00000378387 FBN1P35555 2871 aaKnown RBP6.52□□□□□ -1.37
ARHGEF39-201ENST00000378387 IGLV5-37A0A075B6J1 123 aa6.52□□□□□ -1.37
ARHGEF39-201ENST00000378387 CSAG1Q6PB30 78 aa6.51□□□□□ -1.37
ARHGEF39-201ENST00000378387 TENM3Q9P273 2699 aa6.51□□□□□ -1.37
ARHGEF39-201ENST00000378387 MRPL34Q9BQ48 92 aaKnown RBP6.51□□□□□ -1.37
ARHGEF39-201ENST00000378387 MIR22HGQ0VDD5 57 aa6.51□□□□□ -1.37
ARHGEF39-201ENST00000378387 TENM1Q9UKZ4 2725 aa6.5□□□□□ -1.37
ARHGEF39-201ENST00000378387 KMT2BQ9UMN6 2715 aaPredicted RBP6.5□□□□□ -1.37
ARHGEF39-201ENST00000378387 KRTAP1-3Q8IUG1 177 aa6.5□□□□□ -1.37
ARHGEF39-201ENST00000378387 ANAPC11Q9NYG5 84 aa6.5□□□□□ -1.37
ARHGEF39-201ENST00000378387 H3BNG1 76 aa6.49□□□□□ -1.37
ARHGEF39-201ENST00000378387 DNAH10OSP0CZ25 163 aa6.49□□□□□ -1.37
ARHGEF39-201ENST00000378387 UQCR11O14957 56 aa6.47□□□□□ -1.37
ARHGEF39-201ENST00000378387 DMBT1Q9UGM3 2413 aaPredicted RBP6.47□□□□□ -1.37
ARHGEF39-201ENST00000378387 A0A1B0GVX0 72 aa6.46□□□□□ -1.38
ARHGEF39-201ENST00000378387 CIRBP-AS1Q8TBR5 109 aa6.45□□□□□ -1.38
ARHGEF39-201ENST00000378387 ZNF706Q9Y5V0 76 aaPredicted RBP6.45□□□□□ -1.38
ARHGEF39-201ENST00000378387 IGKV2D-30A0A075B6S6 120 aa6.43□□□□□ -1.38
ARHGEF39-201ENST00000378387 IGKV2-30P06310 120 aa6.43□□□□□ -1.38
ARHGEF39-201ENST00000378387 A0A087X002 238 aa6.43□□□□□ -1.38
ARHGEF39-201ENST00000378387 NOTCH2NLQ7Z3S9 236 aa6.43□□□□□ -1.38
ARHGEF39-201ENST00000378387 COL7A1Q02388 2944 aa6.42□□□□□ -1.38
ARHGEF39-201ENST00000378387 RTL8CO15255 209 aa6.41□□□□□ -1.38
ARHGEF39-201ENST00000378387 KRTAP11-1Q8IUC1 163 aa6.41□□□□□ -1.38
ARHGEF39-201ENST00000378387 KRTAP1-1Q07627 177 aa6.41□□□□□ -1.38
ARHGEF39-201ENST00000378387 PLA2G1BP04054 148 aaKnown RBP6.39□□□□□ -1.39
ARHGEF39-201ENST00000378387 C1orf134Q5TEV5 83 aa6.39□□□□□ -1.39
ARHGEF39-201ENST00000378387 ZNF469Q96JG9 3925 aaPredicted RBP6.39□□□□□ -1.39
ARHGEF39-201ENST00000378387 Q5W150 140 aa6.38□□□□□ -1.39
ARHGEF39-201ENST00000378387 KRTAP10-11P60412 298 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms