RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 KRTAP10-3P60369 221 aa9.57□□□□□ -0.88
EXT1-201ENST00000378204 SMR3BP02814 79 aaPredicted RBP9.56□□□□□ -0.88
EXT1-201ENST00000378204 SETXQ7Z333 2677 aaKnown RBP9.56□□□□□ -0.88
EXT1-201ENST00000378204 A0A1W2PNM2 257 aa9.55□□□□□ -0.88
EXT1-201ENST00000378204 CYSTM1Q9H1C7 97 aa9.55□□□□□ -0.88
EXT1-201ENST00000378204 MGAQ8IWI9 3026 aa9.55□□□□□ -0.88
EXT1-201ENST00000378204 GCN1Q92616 2671 aaKnown RBP9.55□□□□□ -0.88
EXT1-201ENST00000378204 ZNF575Q86XF7 245 aa9.53□□□□□ -0.88
EXT1-201ENST00000378204 COL6A5A8TX70 2615 aa9.53□□□□□ -0.88
EXT1-201ENST00000378204 IGLV5-48A0A075B6I7 105 aa9.53□□□□□ -0.88
EXT1-201ENST00000378204 OXTP01178 125 aa9.51□□□□□ -0.89
EXT1-201ENST00000378204 CASC10Q5T4H9 136 aa9.48□□□□□ -0.89
EXT1-201ENST00000378204 DMBT1Q9UGM3 2413 aaPredicted RBP9.48□□□□□ -0.89
EXT1-201ENST00000378204 SPINK7P58062 85 aa9.48□□□□□ -0.89
EXT1-201ENST00000378204 Q8N1X5 172 aa9.47□□□□□ -0.89
EXT1-201ENST00000378204 ZNF292O60281 2723 aa9.44□□□□□ -0.9
EXT1-201ENST00000378204 MKI67P46013 3256 aaKnown RBP9.41□□□□□ -0.9
EXT1-201ENST00000378204 STAB2Q8WWQ8 2551 aa9.41□□□□□ -0.9
EXT1-201ENST00000378204 RANBP2P49792 3224 aaKnown RBP9.41□□□□□ -0.9
EXT1-201ENST00000378204 VPS13AQ96RL7 3174 aa9.4□□□□□ -0.9
EXT1-201ENST00000378204 KRTAP1-3Q8IUG1 177 aa9.4□□□□□ -0.9
EXT1-201ENST00000378204 ROMO1P60602 79 aa9.38□□□□□ -0.91
EXT1-201ENST00000378204 WDFY4Q6ZS81 3184 aa9.38□□□□□ -0.91
EXT1-201ENST00000378204 SEC61BP60468 96 aaKnown RBP9.37□□□□□ -0.91
EXT1-201ENST00000378204 HRES1P13985 223 aa9.35□□□□□ -0.91
EXT1-201ENST00000378204 BAHCC1Q9P281 2608 aa9.35□□□□□ -0.91
EXT1-201ENST00000378204 TRIOO75962 3097 aa9.33□□□□□ -0.92
EXT1-201ENST00000378204 KRTAP1-1Q07627 177 aa9.33□□□□□ -0.92
EXT1-201ENST00000378204 Q6ZSA8 131 aa9.32□□□□□ -0.92
EXT1-201ENST00000378204 PRUNE2Q8WUY3 3088 aa9.32□□□□□ -0.92
EXT1-201ENST00000378204 TRANK1O15050 2925 aa9.32□□□□□ -0.92
EXT1-201ENST00000378204 LAMA3Q16787 3333 aa9.31□□□□□ -0.92
EXT1-201ENST00000378204 TNP2Q05952 138 aa9.3□□□□□ -0.92
EXT1-201ENST00000378204 FRYQ5TBA9 3013 aa9.3□□□□□ -0.92
EXT1-201ENST00000378204 XIRP2A4UGR9 3374 aa9.3□□□□□ -0.92
EXT1-201ENST00000378204 NBEAL2Q6ZNJ1 2754 aa9.3□□□□□ -0.92
EXT1-201ENST00000378204 ITPR2Q14571 2701 aa9.29□□□□□ -0.92
EXT1-201ENST00000378204 A6NN06 94 aa9.28□□□□□ -0.92
EXT1-201ENST00000378204 FREM2Q5SZK8 3169 aa9.28□□□□□ -0.92
EXT1-201ENST00000378204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.26□□□□□ -0.93
EXT1-201ENST00000378204 KMT2BQ9UMN6 2715 aaPredicted RBP9.24□□□□□ -0.93
EXT1-201ENST00000378204 DSPP15924 2871 aaKnown RBP9.24□□□□□ -0.93
EXT1-201ENST00000378204 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
EXT1-201ENST00000378204 CHD9Q3L8U1 2897 aa9.22□□□□□ -0.93
EXT1-201ENST00000378204 KRTAP25-1Q3LHN0 102 aa9.19□□□□□ -0.94
EXT1-201ENST00000378204 CELSR3Q9NYQ7 3312 aa9.19□□□□□ -0.94
EXT1-201ENST00000378204 UBR5O95071 2799 aaPredicted RBP9.19□□□□□ -0.94
EXT1-201ENST00000378204 BRCA2P51587 3418 aa9.17□□□□□ -0.94
EXT1-201ENST00000378204 PLAC8Q9NZF1 115 aa9.17□□□□□ -0.94
EXT1-201ENST00000378204 SPRR1AP35321 89 aa9.16□□□□□ -0.94
EXT1-201ENST00000378204 NDUFAF8A1L188 74 aa9.16□□□□□ -0.94
EXT1-201ENST00000378204 ZCCHC13Q8WW36 166 aaKnown RBP9.16□□□□□ -0.94
EXT1-201ENST00000378204 MMP24-AS1A0A0U1RRL7 71 aa9.16□□□□□ -0.94
EXT1-201ENST00000378204 HTTP42858 3142 aa9.16□□□□□ -0.94
EXT1-201ENST00000378204 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
EXT1-201ENST00000378204 M0R2T5 61 aa9.14□□□□□ -0.95
EXT1-201ENST00000378204 APCP25054 2843 aa9.13□□□□□ -0.95
EXT1-201ENST00000378204 KALRNO60229 2985 aa9.11□□□□□ -0.95
EXT1-201ENST00000378204 A0A087X002 238 aa9.1□□□□□ -0.95
EXT1-201ENST00000378204 S4R3F8 94 aa9.1□□□□□ -0.95
EXT1-201ENST00000378204 NSD1Q96L73 2696 aaPredicted RBP9.09□□□□□ -0.95
EXT1-201ENST00000378204 LINC00472Q9H8W2 130 aa9.08□□□□□ -0.96
EXT1-201ENST00000378204 Q8NDZ9 215 aa9.07□□□□□ -0.96
EXT1-201ENST00000378204 UNC80Q8N2C7 3258 aa9.07□□□□□ -0.96
EXT1-201ENST00000378204 SPRR1BP22528 89 aa9.06□□□□□ -0.96
EXT1-201ENST00000378204 H1FX-AS1Q4G0G2 97 aa9.06□□□□□ -0.96
EXT1-201ENST00000378204 Q5W150 140 aa9.06□□□□□ -0.96
EXT1-201ENST00000378204 DMXL2Q8TDJ6 3036 aa9.02□□□□□ -0.96
EXT1-201ENST00000378204 FRYLO94915 3013 aa9.01□□□□□ -0.97
EXT1-201ENST00000378204 IGSF10Q6WRI0 2623 aa9□□□□□ -0.97
EXT1-201ENST00000378204 R4GN34 69 aa9□□□□□ -0.97
EXT1-201ENST00000378204 ITPR1Q14643 2758 aa9□□□□□ -0.97
EXT1-201ENST00000378204 ASH1LQ9NR48 2969 aaKnown RBP8.98□□□□□ -0.97
EXT1-201ENST00000378204 UTP20O75691 2785 aaKnown RBP8.97□□□□□ -0.97
EXT1-201ENST00000378204 REV3LO60673 3130 aa8.94□□□□□ -0.98
EXT1-201ENST00000378204 Q6ZR54 194 aa8.94□□□□□ -0.98
EXT1-201ENST00000378204 PLAC4Q8WY50 150 aa8.92□□□□□ -0.98
EXT1-201ENST00000378204 LAMA1P25391 3075 aa8.91□□□□□ -0.98
EXT1-201ENST00000378204 ADM2Q7Z4H4 148 aa8.91□□□□□ -0.98
EXT1-201ENST00000378204 KRTAP1-5Q9BYS1 174 aa8.9□□□□□ -0.98
EXT1-201ENST00000378204 KRTAP26-1Q6PEX3 210 aa8.88□□□□□ -0.99
EXT1-201ENST00000378204 LRBAP50851 2863 aa8.87□□□□□ -0.99
EXT1-201ENST00000378204 CDH23Q9H251 3354 aa8.87□□□□□ -0.99
EXT1-201ENST00000378204 NBEAQ8NFP9 2946 aa8.85□□□□□ -0.99
EXT1-201ENST00000378204 Q5VSD8 79 aa8.83□□□□□ -1
EXT1-201ENST00000378204 TACC2O95359 2948 aa8.83□□□□□ -1
EXT1-201ENST00000378204 C20orf166-AS1Q96NR2 134 aa8.82□□□□□ -1
EXT1-201ENST00000378204 DNAH14Q0VDD8 3507 aa8.81□□□□□ -1
EXT1-201ENST00000378204 FLNCQ14315 2725 aa8.81□□□□□ -1
EXT1-201ENST00000378204 CRYBG3Q68DQ2 2970 aa8.81□□□□□ -1
EXT1-201ENST00000378204 KRTAP10-1P60331 282 aa8.8□□□□□ -1
EXT1-201ENST00000378204 PANO1I0J062 215 aa8.78□□□□□ -1
EXT1-201ENST00000378204 COL12A1Q99715 3063 aa8.78□□□□□ -1
EXT1-201ENST00000378204 BOD1L1Q8NFC6 3051 aa8.78□□□□□ -1
EXT1-201ENST00000378204 CELSR2Q9HCU4 2923 aa8.77□□□□□ -1.01
EXT1-201ENST00000378204 KRTAP4-16G5E9R7 235 aaPredicted RBP8.77□□□□□ -1.01
EXT1-201ENST00000378204 M0QZ58 72 aa8.77□□□□□ -1.01
EXT1-201ENST00000378204 ADGRG4Q8IZF6 3080 aa8.77□□□□□ -1.01
EXT1-201ENST00000378204 KRTAP29-1A8MX34 341 aaPredicted RBP8.76□□□□□ -1.01
EXT1-201ENST00000378204 KRTAP10-2P60368 255 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms