RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CHD6Q8TD26 2715 aa7.62□□□□□ -1.19
NPHP4-202ENST00000378161 ITPR1Q14643 2758 aa7.61□□□□□ -1.19
NPHP4-202ENST00000378161 GIG44P09565 113 aaPredicted RBP7.61□□□□□ -1.19
NPHP4-202ENST00000378161 Q6ZRX8 168 aa7.61□□□□□ -1.19
NPHP4-202ENST00000378161 GVQW2A0A096LPI5 108 aaPredicted RBP7.61□□□□□ -1.19
NPHP4-202ENST00000378161 ASH1LQ9NR48 2969 aaKnown RBP7.61□□□□□ -1.19
NPHP4-202ENST00000378161 C9orf163Q8N9P6 203 aa7.6□□□□□ -1.19
NPHP4-202ENST00000378161 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
NPHP4-202ENST00000378161 C19orf73Q9NVV2 129 aa7.58□□□□□ -1.2
NPHP4-202ENST00000378161 HRES1P13985 223 aa7.58□□□□□ -1.2
NPHP4-202ENST00000378161 SPRR4Q96PI1 79 aa7.58□□□□□ -1.2
NPHP4-202ENST00000378161 H3BNG1 76 aa7.57□□□□□ -1.2
NPHP4-202ENST00000378161 LINC01556Q5JQF7 62 aa7.57□□□□□ -1.2
NPHP4-202ENST00000378161 A0A087X002 238 aa7.57□□□□□ -1.2
NPHP4-202ENST00000378161 ROMO1P60602 79 aa7.56□□□□□ -1.2
NPHP4-202ENST00000378161 TEX15Q9BXT5 2789 aa7.55□□□□□ -1.2
NPHP4-202ENST00000378161 Q8NDZ9 215 aa7.55□□□□□ -1.2
NPHP4-202ENST00000378161 CNBPP62633 177 aaKnown RBP7.54□□□□□ -1.2
NPHP4-202ENST00000378161 UNC79Q9P2D8 2635 aa7.53□□□□□ -1.2
NPHP4-202ENST00000378161 IGLV1-50A0A075B6I6 118 aa7.53□□□□□ -1.2
NPHP4-202ENST00000378161 LY6G6CO95867 125 aa7.53□□□□□ -1.2
NPHP4-202ENST00000378161 CRYBG3Q68DQ2 2970 aa7.53□□□□□ -1.2
NPHP4-202ENST00000378161 IGFL1Q6UW32 110 aa7.52□□□□□ -1.2
NPHP4-202ENST00000378161 ZANQ9Y493 2812 aa7.52□□□□□ -1.21
NPHP4-202ENST00000378161 PRR34Q9NV39 138 aa7.52□□□□□ -1.21
NPHP4-202ENST00000378161 Q6ZR54 194 aa7.51□□□□□ -1.21
NPHP4-202ENST00000378161 SPINK1P00995 79 aa7.5□□□□□ -1.21
NPHP4-202ENST00000378161 STAB1Q9NY15 2570 aa7.5□□□□□ -1.21
NPHP4-202ENST00000378161 GCN1Q92616 2671 aaKnown RBP7.49□□□□□ -1.21
NPHP4-202ENST00000378161 UTP20O75691 2785 aaKnown RBP7.49□□□□□ -1.21
NPHP4-202ENST00000378161 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
NPHP4-202ENST00000378161 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
NPHP4-202ENST00000378161 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
NPHP4-202ENST00000378161 SPINK6Q6UWN8 80 aa7.48□□□□□ -1.21
NPHP4-202ENST00000378161 PRLHP81277 87 aa7.47□□□□□ -1.21
NPHP4-202ENST00000378161 NBEAL2Q6ZNJ1 2754 aa7.47□□□□□ -1.21
NPHP4-202ENST00000378161 COL6A5A8TX70 2615 aa7.47□□□□□ -1.21
NPHP4-202ENST00000378161 IGLV9-49A0A0B4J1Y8 123 aa7.46□□□□□ -1.21
NPHP4-202ENST00000378161 DMAC1Q96GE9 116 aa7.45□□□□□ -1.22
NPHP4-202ENST00000378161 DCHS2Q6V1P9 2916 aa7.45□□□□□ -1.22
NPHP4-202ENST00000378161 MRPL34Q9BQ48 92 aaKnown RBP7.45□□□□□ -1.22
NPHP4-202ENST00000378161 UBR5O95071 2799 aaPredicted RBP7.45□□□□□ -1.22
NPHP4-202ENST00000378161 SMG1Q96Q15 3661 aaKnown RBP7.45□□□□□ -1.22
NPHP4-202ENST00000378161 RTL8CO15255 209 aa7.44□□□□□ -1.22
NPHP4-202ENST00000378161 C8orf17Q9NRJ1 99 aa7.43□□□□□ -1.22
NPHP4-202ENST00000378161 KRTAP25-1Q3LHN0 102 aa7.43□□□□□ -1.22
NPHP4-202ENST00000378161 NOTCH1P46531 2555 aa7.42□□□□□ -1.22
NPHP4-202ENST00000378161 NUPR2A6NF83 97 aa7.41□□□□□ -1.22
NPHP4-202ENST00000378161 KRTAP24-1Q3LI83 254 aa7.41□□□□□ -1.22
NPHP4-202ENST00000378161 IGLV5-37A0A075B6J1 123 aa7.4□□□□□ -1.22
NPHP4-202ENST00000378161 ITPR2Q14571 2701 aa7.4□□□□□ -1.22
NPHP4-202ENST00000378161 DNAH10OSP0CZ25 163 aa7.4□□□□□ -1.22
NPHP4-202ENST00000378161 KRTAP1-3Q8IUG1 177 aa7.4□□□□□ -1.22
NPHP4-202ENST00000378161 LUZP6Q538Z0 58 aa7.4□□□□□ -1.23
NPHP4-202ENST00000378161 C15orf56Q8N910 161 aa7.4□□□□□ -1.23
NPHP4-202ENST00000378161 KRTAP29-1A8MX34 341 aaPredicted RBP7.39□□□□□ -1.23
NPHP4-202ENST00000378161 HRNRQ86YZ3 2850 aaPredicted RBP7.39□□□□□ -1.23
NPHP4-202ENST00000378161 NF1P21359 2839 aa7.38□□□□□ -1.23
NPHP4-202ENST00000378161 KRTAP10-3P60369 221 aa7.35□□□□□ -1.23
NPHP4-202ENST00000378161 MMP24-AS1A0A0U1RRL7 71 aa7.35□□□□□ -1.23
NPHP4-202ENST00000378161 CELSR2Q9HCU4 2923 aa7.35□□□□□ -1.23
NPHP4-202ENST00000378161 NDUFAF8A1L188 74 aa7.35□□□□□ -1.23
NPHP4-202ENST00000378161 NBEAL1Q6ZS30 2694 aa7.34□□□□□ -1.23
NPHP4-202ENST00000378161 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
NPHP4-202ENST00000378161 PLAC8Q9NZF1 115 aa7.34□□□□□ -1.23
NPHP4-202ENST00000378161 CSMD1Q96PZ7 3565 aa7.33□□□□□ -1.24
NPHP4-202ENST00000378161 TLX1NBP0CAT3 122 aa7.33□□□□□ -1.24
NPHP4-202ENST00000378161 PLA2G2DQ9UNK4 145 aa7.33□□□□□ -1.24
NPHP4-202ENST00000378161 FBN2P35556 2912 aa7.33□□□□□ -1.24
NPHP4-202ENST00000378161 KRTAP1-1Q07627 177 aa7.33□□□□□ -1.24
NPHP4-202ENST00000378161 TNP2Q05952 138 aa7.32□□□□□ -1.24
NPHP4-202ENST00000378161 SVEP1Q4LDE5 3571 aa7.32□□□□□ -1.24
NPHP4-202ENST00000378161 IGKV2D-30A0A075B6S6 120 aa7.31□□□□□ -1.24
NPHP4-202ENST00000378161 A0A1B0GVX0 72 aa7.31□□□□□ -1.24
NPHP4-202ENST00000378161 IGKV2-30P06310 120 aa7.31□□□□□ -1.24
NPHP4-202ENST00000378161 BAHCC1Q9P281 2608 aa7.31□□□□□ -1.24
NPHP4-202ENST00000378161 CRIPTQ9P021 101 aa7.31□□□□□ -1.24
NPHP4-202ENST00000378161 SPENQ96T58 3664 aaKnown RBP7.3□□□□□ -1.24
NPHP4-202ENST00000378161 CIRBP-AS1Q8TBR5 109 aa7.28□□□□□ -1.24
NPHP4-202ENST00000378161 CELSR1Q9NYQ6 3014 aa7.28□□□□□ -1.24
NPHP4-202ENST00000378161 FAM229AH3BQW9 127 aa7.27□□□□□ -1.24
NPHP4-202ENST00000378161 ZNF861PO60384 105 aa7.27□□□□□ -1.25
NPHP4-202ENST00000378161 IGLV7-43P04211 117 aa7.27□□□□□ -1.25
NPHP4-202ENST00000378161 CUBNO60494 3623 aa7.26□□□□□ -1.25
NPHP4-202ENST00000378161 CHTF8P0CG12 524 aa7.25□□□□□ -1.25
NPHP4-202ENST00000378161 APCP25054 2843 aa7.24□□□□□ -1.25
NPHP4-202ENST00000378161 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
NPHP4-202ENST00000378161 FLG2Q5D862 2391 aaPredicted RBP7.24□□□□□ -1.25
NPHP4-202ENST00000378161 WWC2-AS2Q96NR7 200 aa7.24□□□□□ -1.25
NPHP4-202ENST00000378161 IGLV5-52A0A0A0MRZ9 124 aa7.23□□□□□ -1.25
NPHP4-202ENST00000378161 LINC00483Q53H64 154 aa7.23□□□□□ -1.25
NPHP4-202ENST00000378161 KRTAP10-11P60412 298 aa7.22□□□□□ -1.25
NPHP4-202ENST00000378161 A8MUU9 505 aa7.22□□□□□ -1.25
NPHP4-202ENST00000378161 C20orf166-AS1Q96NR2 134 aa7.22□□□□□ -1.25
NPHP4-202ENST00000378161 NSD1Q96L73 2696 aaPredicted RBP7.21□□□□□ -1.26
NPHP4-202ENST00000378161 MXRA5Q9NR99 2828 aa7.2□□□□□ -1.26
NPHP4-202ENST00000378161 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
NPHP4-202ENST00000378161 NBDYA0A0U1RRE5 68 aa7.18□□□□□ -1.26
NPHP4-202ENST00000378161 SEC61BP60468 96 aaKnown RBP7.18□□□□□ -1.26
NPHP4-202ENST00000378161 SPRR1AP35321 89 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms