RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 EIF4EBP3O60516 100 aaPredicted RBP7.16□□□□□ -1.26
HIF3A-205ENST00000377670 C9orf92A6NGG3 77 aa7.15□□□□□ -1.26
HIF3A-205ENST00000377670 ZNF861PO60384 105 aa7.14□□□□□ -1.27
HIF3A-205ENST00000377670 RBM12B-AS1Q9P1G2 102 aa7.14□□□□□ -1.27
HIF3A-205ENST00000377670 CELSR2Q9HCU4 2923 aa7.14□□□□□ -1.27
HIF3A-205ENST00000377670 M0R2T5 61 aa7.14□□□□□ -1.27
HIF3A-205ENST00000377670 DCHS2Q6V1P9 2916 aa7.14□□□□□ -1.27
HIF3A-205ENST00000377670 IGLV6-57P01721 117 aa7.13□□□□□ -1.27
HIF3A-205ENST00000377670 CYP4F30PQ9H0H9 118 aa7.13□□□□□ -1.27
HIF3A-205ENST00000377670 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
HIF3A-205ENST00000377670 FAM168BA1KXE4 195 aa7.12□□□□□ -1.27
HIF3A-205ENST00000377670 H7BZZ5 65 aa7.12□□□□□ -1.27
HIF3A-205ENST00000377670 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
HIF3A-205ENST00000377670 TNP2Q05952 138 aa7.11□□□□□ -1.27
HIF3A-205ENST00000377670 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
HIF3A-205ENST00000377670 NF1P21359 2839 aa7.11□□□□□ -1.27
HIF3A-205ENST00000377670 HRNRQ86YZ3 2850 aaPredicted RBP7.1□□□□□ -1.27
HIF3A-205ENST00000377670 A8MWP4 228 aa7.1□□□□□ -1.27
HIF3A-205ENST00000377670 CD164Q04900 197 aa7.1□□□□□ -1.27
HIF3A-205ENST00000377670 SSBP3-AS1Q7Z2R9 100 aa7.1□□□□□ -1.27
HIF3A-205ENST00000377670 NSD1Q96L73 2696 aaPredicted RBP7.1□□□□□ -1.27
HIF3A-205ENST00000377670 FBN2P35556 2912 aa7.09□□□□□ -1.27
HIF3A-205ENST00000377670 IGLV7-43P04211 117 aa7.09□□□□□ -1.27
HIF3A-205ENST00000377670 LINC01600Q96MT4 127 aa7.09□□□□□ -1.27
HIF3A-205ENST00000377670 APCP25054 2843 aa7.09□□□□□ -1.27
HIF3A-205ENST00000377670 LOC101927531A0A1B0GV80 90 aa7.08□□□□□ -1.28
HIF3A-205ENST00000377670 IGLV5-37A0A075B6J1 123 aa7.08□□□□□ -1.28
HIF3A-205ENST00000377670 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
HIF3A-205ENST00000377670 KTN1-AS1Q86SY8 53 aa7.06□□□□□ -1.28
HIF3A-205ENST00000377670 UQCR11O14957 56 aa7.05□□□□□ -1.28
HIF3A-205ENST00000377670 OBSCN-AS1Q96MR7 158 aa7.05□□□□□ -1.28
HIF3A-205ENST00000377670 MRPL34Q9BQ48 92 aaKnown RBP7.05□□□□□ -1.28
HIF3A-205ENST00000377670 SMG1Q96Q15 3661 aaKnown RBP7.04□□□□□ -1.28
HIF3A-205ENST00000377670 HIVEP1P15822 2718 aa7.04□□□□□ -1.28
HIF3A-205ENST00000377670 Q6ZSA8 131 aa7.04□□□□□ -1.28
HIF3A-205ENST00000377670 IGLV1-50A0A075B6I6 118 aa7.03□□□□□ -1.28
HIF3A-205ENST00000377670 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
HIF3A-205ENST00000377670 PSORS1C2Q9UIG4 136 aa7.03□□□□□ -1.28
HIF3A-205ENST00000377670 IGFL1Q6UW32 110 aa7.02□□□□□ -1.28
HIF3A-205ENST00000377670 LCE6AA0A183 80 aa7.02□□□□□ -1.29
HIF3A-205ENST00000377670 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
HIF3A-205ENST00000377670 KCNQ1DNQ9H478 68 aa7.01□□□□□ -1.29
HIF3A-205ENST00000377670 NIPBLQ6KC79 2804 aaeCLIP7.01□□□□□ -1.29
HIF3A-205ENST00000377670 A0A0G2JQZ4 141 aa7.01□□□□□ -1.29
HIF3A-205ENST00000377670 A0A1W2PNN7 141 aa7.01□□□□□ -1.29
HIF3A-205ENST00000377670 CSMD1Q96PZ7 3565 aa7.01□□□□□ -1.29
HIF3A-205ENST00000377670 DSCR10P59022 87 aa7□□□□□ -1.29
HIF3A-205ENST00000377670 C15orf56Q8N910 161 aa7□□□□□ -1.29
HIF3A-205ENST00000377670 LCA10Q71F78 164 aa7□□□□□ -1.29
HIF3A-205ENST00000377670 PRR15Q8IV56 129 aa7□□□□□ -1.29
HIF3A-205ENST00000377670 ANAPC11Q9NYG5 84 aa6.99□□□□□ -1.29
HIF3A-205ENST00000377670 Q8N377 158 aa6.99□□□□□ -1.29
HIF3A-205ENST00000377670 LINC00612Q8N6U2 182 aa6.99□□□□□ -1.29
HIF3A-205ENST00000377670 PRR34Q9NV39 138 aa6.99□□□□□ -1.29
HIF3A-205ENST00000377670 C8orf17Q9NRJ1 99 aa6.98□□□□□ -1.29
HIF3A-205ENST00000377670 CNBPP62633 177 aaKnown RBP6.97□□□□□ -1.29
HIF3A-205ENST00000377670 SVEP1Q4LDE5 3571 aa6.96□□□□□ -1.3
HIF3A-205ENST00000377670 Q5VSD8 79 aa6.94□□□□□ -1.3
HIF3A-205ENST00000377670 CUBNO60494 3623 aa6.94□□□□□ -1.3
HIF3A-205ENST00000377670 TLX1NBP0CAT3 122 aa6.93□□□□□ -1.3
HIF3A-205ENST00000377670 A0A1B0GVX0 72 aa6.93□□□□□ -1.3
HIF3A-205ENST00000377670 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
HIF3A-205ENST00000377670 CELSR1Q9NYQ6 3014 aa6.92□□□□□ -1.3
HIF3A-205ENST00000377670 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
HIF3A-205ENST00000377670 CRIPTQ9P021 101 aa6.92□□□□□ -1.3
HIF3A-205ENST00000377670 WIPF1O43516 503 aa6.92□□□□□ -1.3
HIF3A-205ENST00000377670 SPRR4Q96PI1 79 aa6.9□□□□□ -1.3
HIF3A-205ENST00000377670 FAM104AQ969W3 186 aa6.9□□□□□ -1.31
HIF3A-205ENST00000377670 KMT2BQ9UMN6 2715 aaPredicted RBP6.89□□□□□ -1.31
HIF3A-205ENST00000377670 A0A1W2PNM2 257 aa6.89□□□□□ -1.31
HIF3A-205ENST00000377670 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
HIF3A-205ENST00000377670 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
HIF3A-205ENST00000377670 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
HIF3A-205ENST00000377670 MXRA5Q9NR99 2828 aa6.88□□□□□ -1.31
HIF3A-205ENST00000377670 Q1T7F1 81 aa6.88□□□□□ -1.31
HIF3A-205ENST00000377670 Q5XG85 94 aa6.85□□□□□ -1.31
HIF3A-205ENST00000377670 OCR1Q9BZK8 76 aa6.85□□□□□ -1.31
HIF3A-205ENST00000377670 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
HIF3A-205ENST00000377670 STAB2Q8WWQ8 2551 aa6.84□□□□□ -1.31
HIF3A-205ENST00000377670 FAM229BQ4G0N7 80 aa6.82□□□□□ -1.32
HIF3A-205ENST00000377670 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
HIF3A-205ENST00000377670 CYSTM1Q9H1C7 97 aa6.81□□□□□ -1.32
HIF3A-205ENST00000377670 TENM4Q6N022 2769 aa6.8□□□□□ -1.32
HIF3A-205ENST00000377670 A0A0D9SG42 100 aa6.8□□□□□ -1.32
HIF3A-205ENST00000377670 Q8N1X5 172 aa6.79□□□□□ -1.32
HIF3A-205ENST00000377670 SPENQ96T58 3664 aaKnown RBP6.79□□□□□ -1.32
HIF3A-205ENST00000377670 IGLV5-48A0A075B6I7 105 aa6.78□□□□□ -1.32
HIF3A-205ENST00000377670 NBPF19A0A087WUL8 3843 aa6.77□□□□□ -1.33
HIF3A-205ENST00000377670 OXTP01178 125 aa6.77□□□□□ -1.33
HIF3A-205ENST00000377670 KRTAP21-3Q3LHN1 58 aa6.77□□□□□ -1.33
HIF3A-205ENST00000377670 FP248Q71RG6 208 aaPredicted RBP6.76□□□□□ -1.33
HIF3A-205ENST00000377670 CSMD2Q7Z408 3487 aa6.76□□□□□ -1.33
HIF3A-205ENST00000377670 Q75L30 129 aa6.76□□□□□ -1.33
HIF3A-205ENST00000377670 PLAC8Q9NZF1 115 aa6.75□□□□□ -1.33
HIF3A-205ENST00000377670 Q8NDZ9 215 aa6.75□□□□□ -1.33
HIF3A-205ENST00000377670 PRAC1Q96KF2 57 aa6.72□□□□□ -1.33
HIF3A-205ENST00000377670 H3BS24 57 aa6.72□□□□□ -1.33
HIF3A-205ENST00000377670 ZFHX3Q15911 3703 aa6.71□□□□□ -1.33
HIF3A-205ENST00000377670 CAMK2N1Q7Z7J9 78 aa6.7□□□□□ -1.34
HIF3A-205ENST00000377670 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms