RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 Q8NDZ9 215 aa11.07□□□□□ -0.64
CLSTN1-202ENST00000377298 NOTCH1P46531 2555 aa11.06□□□□□ -0.64
CLSTN1-202ENST00000377298 SPANXA2-OT1Q8N9U9 137 aa11.05□□□□□ -0.64
CLSTN1-202ENST00000377298 KRTAP26-1Q6PEX3 210 aa11.04□□□□□ -0.64
CLSTN1-202ENST00000377298 XIRP2A4UGR9 3374 aa11.04□□□□□ -0.64
CLSTN1-202ENST00000377298 TRIOO75962 3097 aa11.02□□□□□ -0.64
CLSTN1-202ENST00000377298 CYSTM1Q9H1C7 97 aa11.02□□□□□ -0.64
CLSTN1-202ENST00000377298 SPRR1BP22528 89 aa11.01□□□□□ -0.65
CLSTN1-202ENST00000377298 Q8N1X5 172 aa11.01□□□□□ -0.65
CLSTN1-202ENST00000377298 LINC01554Q52M75 96 aa11□□□□□ -0.65
CLSTN1-202ENST00000377298 LCE6AA0A183 80 aa10.99□□□□□ -0.65
CLSTN1-202ENST00000377298 GCN1Q92616 2671 aaKnown RBP10.98□□□□□ -0.65
CLSTN1-202ENST00000377298 CDH23Q9H251 3354 aa10.98□□□□□ -0.65
CLSTN1-202ENST00000377298 FLG2Q5D862 2391 aaPredicted RBP10.97□□□□□ -0.65
CLSTN1-202ENST00000377298 M0R2T5 61 aa10.97□□□□□ -0.65
CLSTN1-202ENST00000377298 Q5XG85 94 aa10.96□□□□□ -0.66
CLSTN1-202ENST00000377298 MAP1AP78559 2803 aaPredicted RBP10.95□□□□□ -0.66
CLSTN1-202ENST00000377298 Q1T7F1 81 aa10.95□□□□□ -0.66
CLSTN1-202ENST00000377298 MIR22HGQ0VDD5 57 aa10.94□□□□□ -0.66
CLSTN1-202ENST00000377298 UBR5O95071 2799 aaPredicted RBP10.94□□□□□ -0.66
CLSTN1-202ENST00000377298 KTN1-AS1Q86SY8 53 aa10.92□□□□□ -0.66
CLSTN1-202ENST00000377298 CRIPTQ9P021 101 aa10.92□□□□□ -0.66
CLSTN1-202ENST00000377298 NBEAL1Q6ZS30 2694 aa10.91□□□□□ -0.66
CLSTN1-202ENST00000377298 VPS13AQ96RL7 3174 aa10.91□□□□□ -0.66
CLSTN1-202ENST00000377298 SPINT4Q6UDR6 99 aa10.88□□□□□ -0.67
CLSTN1-202ENST00000377298 Q5VSD8 79 aa10.88□□□□□ -0.67
CLSTN1-202ENST00000377298 MMP24-AS1A0A0U1RRL7 71 aa10.87□□□□□ -0.67
CLSTN1-202ENST00000377298 KRTAP10-1P60331 282 aa10.87□□□□□ -0.67
CLSTN1-202ENST00000377298 FP248Q71RG6 208 aaPredicted RBP10.86□□□□□ -0.67
CLSTN1-202ENST00000377298 KRTAP10-2P60368 255 aa10.85□□□□□ -0.67
CLSTN1-202ENST00000377298 CDC42SE1Q9NRR8 79 aa10.85□□□□□ -0.67
CLSTN1-202ENST00000377298 A0A0D9SG42 100 aa10.84□□□□□ -0.67
CLSTN1-202ENST00000377298 Q6ZR54 194 aa10.84□□□□□ -0.67
CLSTN1-202ENST00000377298 LINC00472Q9H8W2 130 aa10.83□□□□□ -0.68
CLSTN1-202ENST00000377298 ZCCHC13Q8WW36 166 aaKnown RBP10.82□□□□□ -0.68
CLSTN1-202ENST00000377298 FLNCQ14315 2725 aa10.81□□□□□ -0.68
CLSTN1-202ENST00000377298 HRES1P13985 223 aa10.8□□□□□ -0.68
CLSTN1-202ENST00000377298 ITPR2Q14571 2701 aa10.79□□□□□ -0.68
CLSTN1-202ENST00000377298 LCA10Q71F78 164 aa10.79□□□□□ -0.68
CLSTN1-202ENST00000377298 FRYQ5TBA9 3013 aa10.78□□□□□ -0.68
CLSTN1-202ENST00000377298 NBEAL2Q6ZNJ1 2754 aa10.78□□□□□ -0.68
CLSTN1-202ENST00000377298 SZT2Q5T011 3432 aa10.76□□□□□ -0.69
CLSTN1-202ENST00000377298 OXTP01178 125 aa10.76□□□□□ -0.69
CLSTN1-202ENST00000377298 ITPR1Q14643 2758 aa10.76□□□□□ -0.69
CLSTN1-202ENST00000377298 SEC61BP60468 96 aaKnown RBP10.75□□□□□ -0.69
CLSTN1-202ENST00000377298 NSD1Q96L73 2696 aaPredicted RBP10.75□□□□□ -0.69
CLSTN1-202ENST00000377298 LINC00483Q53H64 154 aa10.74□□□□□ -0.69
CLSTN1-202ENST00000377298 KRTAP4-16G5E9R7 235 aaPredicted RBP10.71□□□□□ -0.7
CLSTN1-202ENST00000377298 CAMK2N1Q7Z7J9 78 aa10.71□□□□□ -0.7
CLSTN1-202ENST00000377298 PANO1I0J062 215 aa10.7□□□□□ -0.7
CLSTN1-202ENST00000377298 Q8N9P0 234 aaPredicted RBP10.7□□□□□ -0.7
CLSTN1-202ENST00000377298 CSAG1Q6PB30 78 aa10.69□□□□□ -0.7
CLSTN1-202ENST00000377298 Q75L30 129 aa10.69□□□□□ -0.7
CLSTN1-202ENST00000377298 ATMQ13315 3056 aa10.67□□□□□ -0.7
CLSTN1-202ENST00000377298 Q5W150 140 aa10.66□□□□□ -0.7
CLSTN1-202ENST00000377298 LAMA1P25391 3075 aa10.65□□□□□ -0.7
CLSTN1-202ENST00000377298 CELSR3Q9NYQ7 3312 aa10.63□□□□□ -0.71
CLSTN1-202ENST00000377298 SPINK7P58062 85 aa10.62□□□□□ -0.71
CLSTN1-202ENST00000377298 KRTAP21-3Q3LHN1 58 aa10.61□□□□□ -0.71
CLSTN1-202ENST00000377298 LINC01558Q9Y6Z2 57 aa10.61□□□□□ -0.71
CLSTN1-202ENST00000377298 FRYLO94915 3013 aa10.61□□□□□ -0.71
CLSTN1-202ENST00000377298 COL12A1Q99715 3063 aa10.61□□□□□ -0.71
CLSTN1-202ENST00000377298 S4R3F8 94 aa10.6□□□□□ -0.71
CLSTN1-202ENST00000377298 VCANP13611 3396 aa10.6□□□□□ -0.71
CLSTN1-202ENST00000377298 Q6ZRN7 208 aaPredicted RBP10.59□□□□□ -0.71
CLSTN1-202ENST00000377298 TACC2O95359 2948 aa10.59□□□□□ -0.71
CLSTN1-202ENST00000377298 A0A1B0GU33 70 aa10.59□□□□□ -0.71
CLSTN1-202ENST00000377298 Q5VV11 94 aa10.59□□□□□ -0.71
CLSTN1-202ENST00000377298 HIVEP1P15822 2718 aa10.59□□□□□ -0.71
CLSTN1-202ENST00000377298 NBEAQ8NFP9 2946 aa10.58□□□□□ -0.72
CLSTN1-202ENST00000377298 DMBT1Q9UGM3 2413 aaPredicted RBP10.57□□□□□ -0.72
CLSTN1-202ENST00000377298 STAB2Q8WWQ8 2551 aa10.56□□□□□ -0.72
CLSTN1-202ENST00000377298 KMT2BQ9UMN6 2715 aaPredicted RBP10.55□□□□□ -0.72
CLSTN1-202ENST00000377298 DNAH14Q0VDD8 3507 aa10.55□□□□□ -0.72
CLSTN1-202ENST00000377298 UTP20O75691 2785 aaKnown RBP10.51□□□□□ -0.73
CLSTN1-202ENST00000377298 FREM2Q5SZK8 3169 aa10.51□□□□□ -0.73
CLSTN1-202ENST00000377298 DMXL2Q8TDJ6 3036 aa10.51□□□□□ -0.73
CLSTN1-202ENST00000377298 A0A087X002 238 aa10.5□□□□□ -0.73
CLSTN1-202ENST00000377298 ADGRG4Q8IZF6 3080 aa10.46□□□□□ -0.73
CLSTN1-202ENST00000377298 R4GN34 69 aa10.45□□□□□ -0.74
CLSTN1-202ENST00000377298 KALRNO60229 2985 aa10.45□□□□□ -0.74
CLSTN1-202ENST00000377298 BOD1L1Q8NFC6 3051 aa10.45□□□□□ -0.74
CLSTN1-202ENST00000377298 TNRC18O15417 2968 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-202ENST00000377298 COL6A3P12111 3177 aa10.44□□□□□ -0.74
CLSTN1-202ENST00000377298 APCP25054 2843 aa10.43□□□□□ -0.74
CLSTN1-202ENST00000377298 KRTAP11-1Q8IUC1 163 aa10.42□□□□□ -0.74
CLSTN1-202ENST00000377298 DMAC1Q96GE9 116 aa10.41□□□□□ -0.74
CLSTN1-202ENST00000377298 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
CLSTN1-202ENST00000377298 RPS29P62273 56 aaKnown RBP10.39□□□□□ -0.75
CLSTN1-202ENST00000377298 ASB16-AS1Q495Z4 193 aa10.38□□□□□ -0.75
CLSTN1-202ENST00000377298 KRTAP7-1Q8IUC3 87 aa10.38□□□□□ -0.75
CLSTN1-202ENST00000377298 LUZP6Q538Z0 58 aa10.38□□□□□ -0.75
CLSTN1-202ENST00000377298 LRBAP50851 2863 aa10.36□□□□□ -0.75
CLSTN1-202ENST00000377298 EYSQ5T1H1 3165 aa10.36□□□□□ -0.75
CLSTN1-202ENST00000377298 TENM4Q6N022 2769 aa10.36□□□□□ -0.75
CLSTN1-202ENST00000377298 PRAC1Q96KF2 57 aa10.35□□□□□ -0.75
CLSTN1-202ENST00000377298 NIPBLQ6KC79 2804 aaeCLIP10.35□□□□□ -0.75
CLSTN1-202ENST00000377298 REV3LO60673 3130 aa10.35□□□□□ -0.75
CLSTN1-202ENST00000377298 ZZEF1O43149 2961 aa10.31□□□□□ -0.76
CLSTN1-202ENST00000377298 KRTAP13-1Q8IUC0 172 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms