RNA–Protein interactions for RNA: ENST00000373115.4

CHST3-201, Transcript of carbohydrate sulfotransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHST3, Length 6,970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHST3-201ENST00000373115 KRTAP26-1Q6PEX3 210 aa9.37□□□□□ -0.91
CHST3-201ENST00000373115 C5orf42Q9H799 3197 aa9.36□□□□□ -0.91
CHST3-201ENST00000373115 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
CHST3-201ENST00000373115 FLNBO75369 2602 aaKnown RBP9.36□□□□□ -0.91
CHST3-201ENST00000373115 PRRC2CQ9Y520 2896 aaKnown RBP9.34□□□□□ -0.91
CHST3-201ENST00000373115 ADM2Q7Z4H4 148 aa9.31□□□□□ -0.92
CHST3-201ENST00000373115 MGAM2Q2M2H8 2515 aa9.29□□□□□ -0.92
CHST3-201ENST00000373115 SPRR1BP22528 89 aa9.29□□□□□ -0.92
CHST3-201ENST00000373115 SEC61BP60468 96 aaKnown RBP9.27□□□□□ -0.93
CHST3-201ENST00000373115 Q5VSD8 79 aa9.27□□□□□ -0.93
CHST3-201ENST00000373115 FLG2Q5D862 2391 aaPredicted RBP9.26□□□□□ -0.93
CHST3-201ENST00000373115 KRTAP1-5Q9BYS1 174 aa9.26□□□□□ -0.93
CHST3-201ENST00000373115 EPG5Q9HCE0 2579 aa9.25□□□□□ -0.93
CHST3-201ENST00000373115 PCNTO95613 3336 aa9.25□□□□□ -0.93
CHST3-201ENST00000373115 HECTD1Q9ULT8 2610 aa9.24□□□□□ -0.93
CHST3-201ENST00000373115 Q6ZR54 194 aa9.23□□□□□ -0.93
CHST3-201ENST00000373115 KRTAP10-1P60331 282 aa9.21□□□□□ -0.94
CHST3-201ENST00000373115 PLAC4Q8WY50 150 aa9.21□□□□□ -0.94
CHST3-201ENST00000373115 KRTAP10-2P60368 255 aa9.19□□□□□ -0.94
CHST3-201ENST00000373115 KRTAP16-1A8MUX0 517 aa9.13□□□□□ -0.95
CHST3-201ENST00000373115 PANO1I0J062 215 aa9.1□□□□□ -0.95
CHST3-201ENST00000373115 ATRQ13535 2644 aa9.1□□□□□ -0.95
CHST3-201ENST00000373115 A8MU10 97 aa9.09□□□□□ -0.95
CHST3-201ENST00000373115 A0A087X002 238 aa9.09□□□□□ -0.95
CHST3-201ENST00000373115 NOTCH2NLQ7Z3S9 236 aa9.09□□□□□ -0.95
CHST3-201ENST00000373115 MAST4O15021 2626 aa9.07□□□□□ -0.96
CHST3-201ENST00000373115 CFAP54Q96N23 3096 aa9.07□□□□□ -0.96
CHST3-201ENST00000373115 C20orf166-AS1Q96NR2 134 aa9.07□□□□□ -0.96
CHST3-201ENST00000373115 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
CHST3-201ENST00000373115 FLNAP21333 2647 aaKnown RBP9.05□□□□□ -0.96
CHST3-201ENST00000373115 ASB16-AS1Q495Z4 193 aa9.04□□□□□ -0.96
CHST3-201ENST00000373115 KRTAP25-1Q3LHN0 102 aa9.04□□□□□ -0.96
CHST3-201ENST00000373115 KRTAP4-16G5E9R7 235 aaPredicted RBP9.02□□□□□ -0.97
CHST3-201ENST00000373115 ITPR3Q14573 2671 aa9.01□□□□□ -0.97
CHST3-201ENST00000373115 A6NN06 94 aa8.97□□□□□ -0.97
CHST3-201ENST00000373115 LCE6AA0A183 80 aa8.95□□□□□ -0.98
CHST3-201ENST00000373115 NDUFAF8A1L188 74 aa8.94□□□□□ -0.98
CHST3-201ENST00000373115 A8MUU9 505 aa8.94□□□□□ -0.98
CHST3-201ENST00000373115 CFAP46Q8IYW2 2715 aa8.92□□□□□ -0.98
CHST3-201ENST00000373115 AKAP13Q12802 2813 aa8.92□□□□□ -0.98
CHST3-201ENST00000373115 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.98
CHST3-201ENST00000373115 A0A0C4DFX4 3053 aa8.89□□□□□ -0.99
CHST3-201ENST00000373115 DMBT1Q9UGM3 2413 aaPredicted RBP8.87□□□□□ -0.99
CHST3-201ENST00000373115 XIRP2A4UGR9 3374 aa8.87□□□□□ -0.99
CHST3-201ENST00000373115 HELZ2Q9BYK8 2649 aaKnown RBP8.87□□□□□ -0.99
CHST3-201ENST00000373115 MKI67P46013 3256 aaKnown RBP8.84□□□□□ -0.99
CHST3-201ENST00000373115 CHD6Q8TD26 2715 aa8.84□□□□□ -0.99
CHST3-201ENST00000373115 NBEAL1Q6ZS30 2694 aa8.81□□□□□ -1
CHST3-201ENST00000373115 C10orf95Q9H7T3 257 aa8.79□□□□□ -1
CHST3-201ENST00000373115 CHD7Q9P2D1 2997 aa8.79□□□□□ -1
CHST3-201ENST00000373115 SETXQ7Z333 2677 aaKnown RBP8.77□□□□□ -1
CHST3-201ENST00000373115 STAB1Q9NY15 2570 aa8.76□□□□□ -1.01
CHST3-201ENST00000373115 TEX15Q9BXT5 2789 aa8.75□□□□□ -1.01
CHST3-201ENST00000373115 LAMA2P24043 3122 aaKnown RBP8.74□□□□□ -1.01
CHST3-201ENST00000373115 FREM2Q5SZK8 3169 aa8.74□□□□□ -1.01
CHST3-201ENST00000373115 TRIOO75962 3097 aa8.73□□□□□ -1.01
CHST3-201ENST00000373115 KRTAP7-1Q8IUC3 87 aa8.71□□□□□ -1.01
CHST3-201ENST00000373115 CELSR3Q9NYQ7 3312 aa8.71□□□□□ -1.02
CHST3-201ENST00000373115 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
CHST3-201ENST00000373115 TNP1P09430 55 aa8.68□□□□□ -1.02
CHST3-201ENST00000373115 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
CHST3-201ENST00000373115 CENPEQ02224 2701 aa8.66□□□□□ -1.02
CHST3-201ENST00000373115 MGAQ8IWI9 3026 aa8.66□□□□□ -1.02
CHST3-201ENST00000373115 TEP1Q99973 2627 aaKnown RBP8.63□□□□□ -1.03
CHST3-201ENST00000373115 GCN1Q92616 2671 aaKnown RBP8.61□□□□□ -1.03
CHST3-201ENST00000373115 DNAH14Q0VDD8 3507 aa8.61□□□□□ -1.03
CHST3-201ENST00000373115 Q6ZRN7 208 aaPredicted RBP8.61□□□□□ -1.03
CHST3-201ENST00000373115 PRUNE2Q8WUY3 3088 aa8.58□□□□□ -1.04
CHST3-201ENST00000373115 LAMA3Q16787 3333 aa8.58□□□□□ -1.04
CHST3-201ENST00000373115 UNC79Q9P2D8 2635 aa8.55□□□□□ -1.04
CHST3-201ENST00000373115 BRCA2P51587 3418 aa8.55□□□□□ -1.04
CHST3-201ENST00000373115 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
CHST3-201ENST00000373115 NBEAL2Q6ZNJ1 2754 aa8.53□□□□□ -1.04
CHST3-201ENST00000373115 REV3LO60673 3130 aa8.53□□□□□ -1.04
CHST3-201ENST00000373115 RANBP2P49792 3224 aaKnown RBP8.53□□□□□ -1.04
CHST3-201ENST00000373115 UNC80Q8N2C7 3258 aa8.52□□□□□ -1.04
CHST3-201ENST00000373115 WDFY4Q6ZS81 3184 aa8.52□□□□□ -1.05
CHST3-201ENST00000373115 BAHCC1Q9P281 2608 aa8.5□□□□□ -1.05
CHST3-201ENST00000373115 COL6A5A8TX70 2615 aa8.48□□□□□ -1.05
CHST3-201ENST00000373115 FRYQ5TBA9 3013 aa8.48□□□□□ -1.05
CHST3-201ENST00000373115 STAB2Q8WWQ8 2551 aa8.48□□□□□ -1.05
CHST3-201ENST00000373115 SZT2Q5T011 3432 aa8.47□□□□□ -1.05
CHST3-201ENST00000373115 VPS13AQ96RL7 3174 aa8.46□□□□□ -1.06
CHST3-201ENST00000373115 KRTAP10-8P60410 259 aa8.46□□□□□ -1.06
CHST3-201ENST00000373115 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
CHST3-201ENST00000373115 NOTCH1P46531 2555 aa8.42□□□□□ -1.06
CHST3-201ENST00000373115 CDH23Q9H251 3354 aa8.41□□□□□ -1.06
CHST3-201ENST00000373115 HTTP42858 3142 aa8.4□□□□□ -1.07
CHST3-201ENST00000373115 CHD9Q3L8U1 2897 aa8.39□□□□□ -1.07
CHST3-201ENST00000373115 KALRNO60229 2985 aa8.38□□□□□ -1.07
CHST3-201ENST00000373115 CRYBG3Q68DQ2 2970 aa8.36□□□□□ -1.07
CHST3-201ENST00000373115 H0YAA0 97 aa8.34□□□□□ -1.07
CHST3-201ENST00000373115 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
CHST3-201ENST00000373115 COL6A3P12111 3177 aa8.3□□□□□ -1.08
CHST3-201ENST00000373115 APCP25054 2843 aa8.29□□□□□ -1.08
CHST3-201ENST00000373115 ITPR2Q14571 2701 aa8.27□□□□□ -1.09
CHST3-201ENST00000373115 P0C880 135 aa8.26□□□□□ -1.09
CHST3-201ENST00000373115 MAP1AP78559 2803 aaPredicted RBP8.25□□□□□ -1.09
CHST3-201ENST00000373115 XP32Q5T750 250 aa8.24□□□□□ -1.09
CHST3-201ENST00000373115 CFAP47Q6ZTR5 3102 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms