RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 KRTAP25-1Q3LHN0 102 aa8.32□□□□□ -1.08
RAPGEF1-201ENST00000372189 PLAC4Q8WY50 150 aa8.32□□□□□ -1.08
RAPGEF1-201ENST00000372189 OXTP01178 125 aa8.31□□□□□ -1.08
RAPGEF1-201ENST00000372189 H1FX-AS1Q4G0G2 97 aa8.3□□□□□ -1.08
RAPGEF1-201ENST00000372189 A6NN06 94 aa8.3□□□□□ -1.08
RAPGEF1-201ENST00000372189 USP24Q9UPU5 2620 aa8.29□□□□□ -1.08
RAPGEF1-201ENST00000372189 Q8N1X5 172 aa8.29□□□□□ -1.08
RAPGEF1-201ENST00000372189 ZNF292O60281 2723 aa8.28□□□□□ -1.08
RAPGEF1-201ENST00000372189 ATRQ13535 2644 aa8.27□□□□□ -1.09
RAPGEF1-201ENST00000372189 PLAC8Q9NZF1 115 aa8.26□□□□□ -1.09
RAPGEF1-201ENST00000372189 MKI67P46013 3256 aaKnown RBP8.26□□□□□ -1.09
RAPGEF1-201ENST00000372189 LAMA3Q16787 3333 aa8.26□□□□□ -1.09
RAPGEF1-201ENST00000372189 CYSTM1Q9H1C7 97 aa8.25□□□□□ -1.09
RAPGEF1-201ENST00000372189 LCE6AA0A183 80 aa8.25□□□□□ -1.09
RAPGEF1-201ENST00000372189 MAST4O15021 2626 aa8.24□□□□□ -1.09
RAPGEF1-201ENST00000372189 Q6ZR54 194 aa8.23□□□□□ -1.09
RAPGEF1-201ENST00000372189 BPTFQ12830 3046 aa8.23□□□□□ -1.09
RAPGEF1-201ENST00000372189 HRES1P13985 223 aa8.21□□□□□ -1.1
RAPGEF1-201ENST00000372189 RPL37P61927 97 aaKnown RBP8.19□□□□□ -1.1
RAPGEF1-201ENST00000372189 MMP24-AS1A0A0U1RRL7 71 aa8.19□□□□□ -1.1
RAPGEF1-201ENST00000372189 Q6ZSA8 131 aa8.18□□□□□ -1.1
RAPGEF1-201ENST00000372189 KRTAP1-5Q9BYS1 174 aa8.16□□□□□ -1.1
RAPGEF1-201ENST00000372189 Q8NDZ9 215 aa8.16□□□□□ -1.1
RAPGEF1-201ENST00000372189 MGAQ8IWI9 3026 aa8.15□□□□□ -1.1
RAPGEF1-201ENST00000372189 AKAP13Q12802 2813 aa8.15□□□□□ -1.11
RAPGEF1-201ENST00000372189 SPRR1AP35321 89 aa8.14□□□□□ -1.11
RAPGEF1-201ENST00000372189 BRCA2P51587 3418 aa8.13□□□□□ -1.11
RAPGEF1-201ENST00000372189 Q5VSD8 79 aa8.13□□□□□ -1.11
RAPGEF1-201ENST00000372189 CENPEQ02224 2701 aa8.11□□□□□ -1.11
RAPGEF1-201ENST00000372189 C20orf166-AS1Q96NR2 134 aa8.1□□□□□ -1.11
RAPGEF1-201ENST00000372189 A0A0C4DFX4 3053 aa8.09□□□□□ -1.11
RAPGEF1-201ENST00000372189 KRTAP10-1P60331 282 aa8.09□□□□□ -1.11
RAPGEF1-201ENST00000372189 KRTAP10-2P60368 255 aa8.08□□□□□ -1.12
RAPGEF1-201ENST00000372189 ADM2Q7Z4H4 148 aa8.07□□□□□ -1.12
RAPGEF1-201ENST00000372189 LINC00472Q9H8W2 130 aa8.07□□□□□ -1.12
RAPGEF1-201ENST00000372189 SPRR1BP22528 89 aa8.06□□□□□ -1.12
RAPGEF1-201ENST00000372189 IGSF10Q6WRI0 2623 aa8.06□□□□□ -1.12
RAPGEF1-201ENST00000372189 KRTAP26-1Q6PEX3 210 aa8.06□□□□□ -1.12
RAPGEF1-201ENST00000372189 BAHCC1Q9P281 2608 aa8.05□□□□□ -1.12
RAPGEF1-201ENST00000372189 SPATA8Q6RVD6 105 aa8.05□□□□□ -1.12
RAPGEF1-201ENST00000372189 PRUNE2Q8WUY3 3088 aa8.04□□□□□ -1.12
RAPGEF1-201ENST00000372189 ZCCHC13Q8WW36 166 aaKnown RBP8.04□□□□□ -1.12
RAPGEF1-201ENST00000372189 A0A087X002 238 aa8.03□□□□□ -1.12
RAPGEF1-201ENST00000372189 Q5W150 140 aa8.02□□□□□ -1.12
RAPGEF1-201ENST00000372189 M0R2T5 61 aa8.02□□□□□ -1.13
RAPGEF1-201ENST00000372189 TEP1Q99973 2627 aaKnown RBP8.01□□□□□ -1.13
RAPGEF1-201ENST00000372189 UNC79Q9P2D8 2635 aa7.99□□□□□ -1.13
RAPGEF1-201ENST00000372189 KRTAP21-3Q3LHN1 58 aa7.98□□□□□ -1.13
RAPGEF1-201ENST00000372189 DSPP15924 2871 aaKnown RBP7.97□□□□□ -1.13
RAPGEF1-201ENST00000372189 TEX15Q9BXT5 2789 aa7.97□□□□□ -1.13
RAPGEF1-201ENST00000372189 WDFY4Q6ZS81 3184 aa7.97□□□□□ -1.13
RAPGEF1-201ENST00000372189 CFAP54Q96N23 3096 aa7.94□□□□□ -1.14
RAPGEF1-201ENST00000372189 CDH23Q9H251 3354 aa7.94□□□□□ -1.14
RAPGEF1-201ENST00000372189 PP632Q6XCG6 107 aa7.93□□□□□ -1.14
RAPGEF1-201ENST00000372189 LAMA2P24043 3122 aaKnown RBP7.92□□□□□ -1.14
RAPGEF1-201ENST00000372189 S4R3F8 94 aa7.91□□□□□ -1.14
RAPGEF1-201ENST00000372189 COL6A5A8TX70 2615 aa7.91□□□□□ -1.14
RAPGEF1-201ENST00000372189 UNC80Q8N2C7 3258 aa7.91□□□□□ -1.14
RAPGEF1-201ENST00000372189 PANO1I0J062 215 aa7.88□□□□□ -1.15
RAPGEF1-201ENST00000372189 A8MUU9 505 aa7.87□□□□□ -1.15
RAPGEF1-201ENST00000372189 SETXQ7Z333 2677 aaKnown RBP7.86□□□□□ -1.15
RAPGEF1-201ENST00000372189 XIRP2A4UGR9 3374 aa7.85□□□□□ -1.15
RAPGEF1-201ENST00000372189 R4GN34 69 aa7.85□□□□□ -1.15
RAPGEF1-201ENST00000372189 KRTAP29-1A8MX34 341 aaPredicted RBP7.84□□□□□ -1.15
RAPGEF1-201ENST00000372189 CHD6Q8TD26 2715 aa7.83□□□□□ -1.16
RAPGEF1-201ENST00000372189 STAB1Q9NY15 2570 aa7.83□□□□□ -1.16
RAPGEF1-201ENST00000372189 KRTAP4-16G5E9R7 235 aaPredicted RBP7.82□□□□□ -1.16
RAPGEF1-201ENST00000372189 NOTCH2NLQ7Z3S9 236 aa7.8□□□□□ -1.16
RAPGEF1-201ENST00000372189 TRIOO75962 3097 aa7.8□□□□□ -1.16
RAPGEF1-201ENST00000372189 SZT2Q5T011 3432 aa7.79□□□□□ -1.16
RAPGEF1-201ENST00000372189 Q6ZRN7 208 aaPredicted RBP7.79□□□□□ -1.16
RAPGEF1-201ENST00000372189 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
RAPGEF1-201ENST00000372189 GCN1Q92616 2671 aaKnown RBP7.75□□□□□ -1.17
RAPGEF1-201ENST00000372189 ITPR2Q14571 2701 aa7.73□□□□□ -1.17
RAPGEF1-201ENST00000372189 TNRC18O15417 2968 aaPredicted RBP7.73□□□□□ -1.17
RAPGEF1-201ENST00000372189 NOTCH1P46531 2555 aa7.7□□□□□ -1.18
RAPGEF1-201ENST00000372189 VPS13AQ96RL7 3174 aa7.7□□□□□ -1.18
RAPGEF1-201ENST00000372189 FLG2Q5D862 2391 aaPredicted RBP7.68□□□□□ -1.18
RAPGEF1-201ENST00000372189 M0QZ58 72 aa7.68□□□□□ -1.18
RAPGEF1-201ENST00000372189 A8MU10 97 aa7.66□□□□□ -1.18
RAPGEF1-201ENST00000372189 KRTAP11-1Q8IUC1 163 aa7.65□□□□□ -1.18
RAPGEF1-201ENST00000372189 FREM2Q5SZK8 3169 aa7.64□□□□□ -1.19
RAPGEF1-201ENST00000372189 KMT2BQ9UMN6 2715 aaPredicted RBP7.63□□□□□ -1.19
RAPGEF1-201ENST00000372189 UBR5O95071 2799 aaPredicted RBP7.63□□□□□ -1.19
RAPGEF1-201ENST00000372189 RPS29P62273 56 aaKnown RBP7.62□□□□□ -1.19
RAPGEF1-201ENST00000372189 NBEAL1Q6ZS30 2694 aa7.62□□□□□ -1.19
RAPGEF1-201ENST00000372189 FRYQ5TBA9 3013 aa7.61□□□□□ -1.19
RAPGEF1-201ENST00000372189 MAP1AP78559 2803 aaPredicted RBP7.59□□□□□ -1.19
RAPGEF1-201ENST00000372189 ITPR1Q14643 2758 aa7.59□□□□□ -1.19
RAPGEF1-201ENST00000372189 CELSR3Q9NYQ7 3312 aa7.58□□□□□ -1.2
RAPGEF1-201ENST00000372189 NBEAL2Q6ZNJ1 2754 aa7.57□□□□□ -1.2
RAPGEF1-201ENST00000372189 FLNCQ14315 2725 aa7.57□□□□□ -1.2
RAPGEF1-201ENST00000372189 KRTAP7-1Q8IUC3 87 aa7.57□□□□□ -1.2
RAPGEF1-201ENST00000372189 NSD1Q96L73 2696 aaPredicted RBP7.57□□□□□ -1.2
RAPGEF1-201ENST00000372189 ATMQ13315 3056 aa7.57□□□□□ -1.2
RAPGEF1-201ENST00000372189 LAMA1P25391 3075 aa7.56□□□□□ -1.2
RAPGEF1-201ENST00000372189 COL6A3P12111 3177 aa7.56□□□□□ -1.2
RAPGEF1-201ENST00000372189 SPTBN5Q9NRC6 3674 aaKnown RBP7.55□□□□□ -1.2
RAPGEF1-201ENST00000372189 HIVEP1P15822 2718 aa7.55□□□□□ -1.2
RAPGEF1-201ENST00000372189 UTP20O75691 2785 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms