RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 HSD52Q0P140 79 aa8.55□□□□□ -1.04
SS18L1-202ENST00000370848 FP248Q71RG6 208 aaPredicted RBP8.55□□□□□ -1.04
SS18L1-202ENST00000370848 BVES-AS1Q5T3Y7 98 aa8.54□□□□□ -1.04
SS18L1-202ENST00000370848 UQCR10Q9UDW1 63 aa8.54□□□□□ -1.04
SS18L1-202ENST00000370848 LOC105371267A0A1B0GV96 52 aa8.53□□□□□ -1.04
SS18L1-202ENST00000370848 TMEM238LA0A1B0GVL6 79 aa8.53□□□□□ -1.04
SS18L1-202ENST00000370848 A6NJY4 79 aa8.53□□□□□ -1.04
SS18L1-202ENST00000370848 K7ERJ3 54 aa8.53□□□□□ -1.04
SS18L1-202ENST00000370848 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
SS18L1-202ENST00000370848 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.05
SS18L1-202ENST00000370848 PRO1854Q9UHT4 67 aa8.52□□□□□ -1.05
SS18L1-202ENST00000370848 PRO1933Q9H354 126 aa8.51□□□□□ -1.05
SS18L1-202ENST00000370848 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
SS18L1-202ENST00000370848 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.49□□□□□ -1.05
SS18L1-202ENST00000370848 TRIAP1O43715 76 aa8.48□□□□□ -1.05
SS18L1-202ENST00000370848 ASB16-AS1Q495Z4 193 aa8.46□□□□□ -1.06
SS18L1-202ENST00000370848 H0YGX0 51 aa8.45□□□□□ -1.06
SS18L1-202ENST00000370848 F8WEM9 126 aa8.44□□□□□ -1.06
SS18L1-202ENST00000370848 CD164Q04900 197 aa8.44□□□□□ -1.06
SS18L1-202ENST00000370848 CLEC2BQ92478 149 aa8.44□□□□□ -1.06
SS18L1-202ENST00000370848 LIMD2Q9BT23 127 aa8.43□□□□□ -1.06
SS18L1-202ENST00000370848 IGLV8-61A0A075B6I0 122 aa8.41□□□□□ -1.06
SS18L1-202ENST00000370848 TSTD3H0UI37 97 aa8.41□□□□□ -1.06
SS18L1-202ENST00000370848 H3BUT2 72 aa8.41□□□□□ -1.06
SS18L1-202ENST00000370848 IGFL1Q6UW32 110 aa8.41□□□□□ -1.06
SS18L1-202ENST00000370848 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
SS18L1-202ENST00000370848 PSMB2P49721 201 aa8.4□□□□□ -1.06
SS18L1-202ENST00000370848 OCIAD2Q56VL3 154 aa8.4□□□□□ -1.06
SS18L1-202ENST00000370848 PPDPFLQ8WWR9 84 aa8.4□□□□□ -1.06
SS18L1-202ENST00000370848 SNHG12Q9BXW3 62 aa8.4□□□□□ -1.06
SS18L1-202ENST00000370848 A0A1B0GX51 115 aa8.37□□□□□ -1.07
SS18L1-202ENST00000370848 SNCGO76070 127 aa8.37□□□□□ -1.07
SS18L1-202ENST00000370848 Q6JHZ5 121 aa8.37□□□□□ -1.07
SS18L1-202ENST00000370848 Q5XG85 94 aa8.36□□□□□ -1.07
SS18L1-202ENST00000370848 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
SS18L1-202ENST00000370848 M0R143 59 aa8.35□□□□□ -1.07
SS18L1-202ENST00000370848 NDUFV3P56181 108 aaKnown RBP8.35□□□□□ -1.07
SS18L1-202ENST00000370848 C1orf195Q5TG92 126 aa8.35□□□□□ -1.07
SS18L1-202ENST00000370848 FABP2P12104 132 aa8.34□□□□□ -1.07
SS18L1-202ENST00000370848 SEC61BP60468 96 aaKnown RBP8.34□□□□□ -1.07
SS18L1-202ENST00000370848 XP32Q5T750 250 aa8.34□□□□□ -1.07
SS18L1-202ENST00000370848 TRBV7-7A0A0K0K1E9 115 aa8.33□□□□□ -1.08
SS18L1-202ENST00000370848 COX6CP09669 75 aa8.32□□□□□ -1.08
SS18L1-202ENST00000370848 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
SS18L1-202ENST00000370848 DNAL4O96015 105 aa8.31□□□□□ -1.08
SS18L1-202ENST00000370848 NAA38Q9BRA0 125 aaKnown RBP8.31□□□□□ -1.08
SS18L1-202ENST00000370848 A0A1B0GV72 72 aa8.3□□□□□ -1.08
SS18L1-202ENST00000370848 H3BMG7 143 aa8.3□□□□□ -1.08
SS18L1-202ENST00000370848 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
SS18L1-202ENST00000370848 ORMDL1Q9P0S3 153 aa8.3□□□□□ -1.08
SS18L1-202ENST00000370848 TCL1BO95988 128 aa8.29□□□□□ -1.08
SS18L1-202ENST00000370848 SCGB1C2P0DMR2 95 aa8.29□□□□□ -1.08
SS18L1-202ENST00000370848 LST1O00453 97 aa8.28□□□□□ -1.08
SS18L1-202ENST00000370848 GHRHP01286 108 aa8.26□□□□□ -1.09
SS18L1-202ENST00000370848 TRACP01848 142 aa8.25□□□□□ -1.09
SS18L1-202ENST00000370848 BATFQ16520 125 aa8.25□□□□□ -1.09
SS18L1-202ENST00000370848 LCE2CQ5TA81 110 aa8.25□□□□□ -1.09
SS18L1-202ENST00000370848 Q6Q795 121 aa8.25□□□□□ -1.09
SS18L1-202ENST00000370848 A0A1W2PNM2 257 aa8.24□□□□□ -1.09
SS18L1-202ENST00000370848 KRTAP19-2Q3LHN2 52 aa8.24□□□□□ -1.09
SS18L1-202ENST00000370848 A0A087WSZ3 146 aa8.22□□□□□ -1.09
SS18L1-202ENST00000370848 TMEM256-PLSCR3K7ERE1 68 aa8.22□□□□□ -1.09
SS18L1-202ENST00000370848 TEN1Q86WV5 123 aa8.22□□□□□ -1.09
SS18L1-202ENST00000370848 H3BQ85 93 aa8.2□□□□□ -1.1
SS18L1-202ENST00000370848 UBE2V1Q13404 147 aa8.19□□□□□ -1.1
SS18L1-202ENST00000370848 ANKRD29Q8N6D5 301 aa8.19□□□□□ -1.1
SS18L1-202ENST00000370848 BAALC-AS2P0C853 105 aa8.17□□□□□ -1.1
SS18L1-202ENST00000370848 SS18L2Q9UHA2 77 aa8.17□□□□□ -1.1
SS18L1-202ENST00000370848 ATXN8Q156A1 80 aa8.16□□□□□ -1.1
SS18L1-202ENST00000370848 Q96NJ1 140 aa8.16□□□□□ -1.1
SS18L1-202ENST00000370848 PCOTHQ58A44 107 aa8.15□□□□□ -1.1
SS18L1-202ENST00000370848 LYRM7Q5U5X0 104 aa8.15□□□□□ -1.1
SS18L1-202ENST00000370848 TRBV7-4A0A0J9YYF1 115 aa8.13□□□□□ -1.11
SS18L1-202ENST00000370848 TAX1BP3O14907 124 aa8.13□□□□□ -1.11
SS18L1-202ENST00000370848 CCKP06307 115 aa8.13□□□□□ -1.11
SS18L1-202ENST00000370848 MT1HP80294 61 aa8.13□□□□□ -1.11
SS18L1-202ENST00000370848 FSIP2Q5CZC0 6907 aa8.11□□□□□ -1.11
SS18L1-202ENST00000370848 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
SS18L1-202ENST00000370848 RBM3P98179 157 aaKnown RBP8.11□□□□□ -1.11
SS18L1-202ENST00000370848 OBSCN-AS1Q96MR7 158 aa8.11□□□□□ -1.11
SS18L1-202ENST00000370848 VPS25Q9BRG1 176 aa8.11□□□□□ -1.11
SS18L1-202ENST00000370848 CRCT1Q9UGL9 99 aa8.11□□□□□ -1.11
SS18L1-202ENST00000370848 TRBV20-1A0A075B6N2 111 aa8.1□□□□□ -1.11
SS18L1-202ENST00000370848 C9orf118A6NHY6 69 aa8.1□□□□□ -1.11
SS18L1-202ENST00000370848 DSCR8Q96T75 97 aa8.08□□□□□ -1.12
SS18L1-202ENST00000370848 C9JAW5 83 aa8.07□□□□□ -1.12
SS18L1-202ENST00000370848 DEFB116Q30KQ4 102 aa8.07□□□□□ -1.12
SS18L1-202ENST00000370848 COL5A1-AS1Q5SY13 56 aa8.07□□□□□ -1.12
SS18L1-202ENST00000370848 SIGMAR1Q99720 223 aa8.07□□□□□ -1.12
SS18L1-202ENST00000370848 A0A1W2PPM0 123 aa8.06□□□□□ -1.12
SS18L1-202ENST00000370848 FLGP20930 4061 aaPredicted RBP8.05□□□□□ -1.12
SS18L1-202ENST00000370848 LORP23490 312 aaPredicted RBP8.05□□□□□ -1.12
SS18L1-202ENST00000370848 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
SS18L1-202ENST00000370848 IGKV4-1P06312 121 aa8.04□□□□□ -1.12
SS18L1-202ENST00000370848 DSCR10P59022 87 aa8.04□□□□□ -1.12
SS18L1-202ENST00000370848 LINC00472Q9H8W2 130 aa8.04□□□□□ -1.12
SS18L1-202ENST00000370848 Q6ZQT0 140 aa8.02□□□□□ -1.13
SS18L1-202ENST00000370848 C14orf132Q9NPU4 83 aa8.02□□□□□ -1.13
SS18L1-202ENST00000370848 JMJD7-PLA2G4BH0Y9G9 81 aa8.01□□□□□ -1.13
SS18L1-202ENST00000370848 PCP4L1A6NKN8 68 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms