RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 C5orf42Q9H799 3197 aa10.9□□□□□ -0.66
CHRNA4-201ENST00000370263 HECTD1Q9ULT8 2610 aa10.9□□□□□ -0.66
CHRNA4-201ENST00000370263 ATRQ13535 2644 aa10.89□□□□□ -0.67
CHRNA4-201ENST00000370263 KRTAP4-16G5E9R7 235 aaPredicted RBP10.87□□□□□ -0.67
CHRNA4-201ENST00000370263 ITPR3Q14573 2671 aa10.86□□□□□ -0.67
CHRNA4-201ENST00000370263 CFAP54Q96N23 3096 aa10.83□□□□□ -0.68
CHRNA4-201ENST00000370263 A6NN06 94 aa10.81□□□□□ -0.68
CHRNA4-201ENST00000370263 ROMO1P60602 79 aa10.8□□□□□ -0.68
CHRNA4-201ENST00000370263 AKAP13Q12802 2813 aa10.79□□□□□ -0.68
CHRNA4-201ENST00000370263 UTRNP46939 3433 aa10.79□□□□□ -0.68
CHRNA4-201ENST00000370263 FLNBO75369 2602 aaKnown RBP10.79□□□□□ -0.68
CHRNA4-201ENST00000370263 CAMK2N1Q7Z7J9 78 aa10.79□□□□□ -0.68
CHRNA4-201ENST00000370263 A0A0A0MQY5 61 aa10.78□□□□□ -0.68
CHRNA4-201ENST00000370263 LCE6AA0A183 80 aa10.78□□□□□ -0.68
CHRNA4-201ENST00000370263 RPL37P61927 97 aaKnown RBP10.78□□□□□ -0.68
CHRNA4-201ENST00000370263 LINC00483Q53H64 154 aa10.77□□□□□ -0.69
CHRNA4-201ENST00000370263 SPATA8Q6RVD6 105 aa10.76□□□□□ -0.69
CHRNA4-201ENST00000370263 S4R3F8 94 aa10.75□□□□□ -0.69
CHRNA4-201ENST00000370263 Q6ZSA8 131 aa10.75□□□□□ -0.69
CHRNA4-201ENST00000370263 CHD6Q8TD26 2715 aa10.74□□□□□ -0.69
CHRNA4-201ENST00000370263 H1FX-AS1Q4G0G2 97 aa10.74□□□□□ -0.69
CHRNA4-201ENST00000370263 KRTAP1-5Q9BYS1 174 aa10.73□□□□□ -0.69
CHRNA4-201ENST00000370263 CHD9Q3L8U1 2897 aa10.72□□□□□ -0.69
CHRNA4-201ENST00000370263 MAST4O15021 2626 aa10.68□□□□□ -0.7
CHRNA4-201ENST00000370263 CENPEQ02224 2701 aa10.67□□□□□ -0.7
CHRNA4-201ENST00000370263 GCN1Q92616 2671 aaKnown RBP10.65□□□□□ -0.7
CHRNA4-201ENST00000370263 UNC79Q9P2D8 2635 aa10.65□□□□□ -0.71
CHRNA4-201ENST00000370263 NBEAL1Q6ZS30 2694 aa10.6□□□□□ -0.71
CHRNA4-201ENST00000370263 A8MU10 97 aa10.57□□□□□ -0.72
CHRNA4-201ENST00000370263 A0A087X002 238 aa10.57□□□□□ -0.72
CHRNA4-201ENST00000370263 NOTCH2NLQ7Z3S9 236 aa10.57□□□□□ -0.72
CHRNA4-201ENST00000370263 R4GN34 69 aa10.55□□□□□ -0.72
CHRNA4-201ENST00000370263 KRTAP25-1Q3LHN0 102 aa10.55□□□□□ -0.72
CHRNA4-201ENST00000370263 CFAP46Q8IYW2 2715 aa10.53□□□□□ -0.72
CHRNA4-201ENST00000370263 MGAQ8IWI9 3026 aa10.52□□□□□ -0.72
CHRNA4-201ENST00000370263 ADM2Q7Z4H4 148 aa10.52□□□□□ -0.73
CHRNA4-201ENST00000370263 PANO1I0J062 215 aa10.52□□□□□ -0.73
CHRNA4-201ENST00000370263 HTTP42858 3142 aa10.52□□□□□ -0.73
CHRNA4-201ENST00000370263 LAMA2P24043 3122 aaKnown RBP10.5□□□□□ -0.73
CHRNA4-201ENST00000370263 HELZ2Q9BYK8 2649 aaKnown RBP10.49□□□□□ -0.73
CHRNA4-201ENST00000370263 TRANK1O15050 2925 aa10.47□□□□□ -0.73
CHRNA4-201ENST00000370263 KRTAP16-1A8MUX0 517 aa10.46□□□□□ -0.74
CHRNA4-201ENST00000370263 NOTCH1P46531 2555 aa10.46□□□□□ -0.74
CHRNA4-201ENST00000370263 NBEAL2Q6ZNJ1 2754 aa10.45□□□□□ -0.74
CHRNA4-201ENST00000370263 M0R2T5 61 aa10.45□□□□□ -0.74
CHRNA4-201ENST00000370263 STAB1Q9NY15 2570 aa10.43□□□□□ -0.74
CHRNA4-201ENST00000370263 FLG2Q5D862 2391 aaPredicted RBP10.42□□□□□ -0.74
CHRNA4-201ENST00000370263 KRTAP7-1Q8IUC3 87 aa10.42□□□□□ -0.74
CHRNA4-201ENST00000370263 DMBT1Q9UGM3 2413 aaPredicted RBP10.41□□□□□ -0.74
CHRNA4-201ENST00000370263 KRTAP11-1Q8IUC1 163 aa10.4□□□□□ -0.74
CHRNA4-201ENST00000370263 RANBP2P49792 3224 aaKnown RBP10.4□□□□□ -0.75
CHRNA4-201ENST00000370263 M0QZ58 72 aa10.38□□□□□ -0.75
CHRNA4-201ENST00000370263 TEX15Q9BXT5 2789 aa10.37□□□□□ -0.75
CHRNA4-201ENST00000370263 KRTAP10-1P60331 282 aa10.37□□□□□ -0.75
CHRNA4-201ENST00000370263 MKI67P46013 3256 aaKnown RBP10.36□□□□□ -0.75
CHRNA4-201ENST00000370263 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
CHRNA4-201ENST00000370263 TRIOO75962 3097 aa10.33□□□□□ -0.76
CHRNA4-201ENST00000370263 FRYQ5TBA9 3013 aa10.33□□□□□ -0.76
CHRNA4-201ENST00000370263 WDFY4Q6ZS81 3184 aa10.29□□□□□ -0.76
CHRNA4-201ENST00000370263 ZNF292O60281 2723 aa10.29□□□□□ -0.76
CHRNA4-201ENST00000370263 COL6A5A8TX70 2615 aa10.27□□□□□ -0.76
CHRNA4-201ENST00000370263 MAP1AP78559 2803 aaPredicted RBP10.26□□□□□ -0.77
CHRNA4-201ENST00000370263 KRTAP13-1Q8IUC0 172 aa10.25□□□□□ -0.77
CHRNA4-201ENST00000370263 NDUFAF8A1L188 74 aa10.24□□□□□ -0.77
CHRNA4-201ENST00000370263 FREM2Q5SZK8 3169 aa10.22□□□□□ -0.77
CHRNA4-201ENST00000370263 LAMA3Q16787 3333 aa10.22□□□□□ -0.77
CHRNA4-201ENST00000370263 TEP1Q99973 2627 aaKnown RBP10.22□□□□□ -0.77
CHRNA4-201ENST00000370263 SEC61BP60468 96 aaKnown RBP10.21□□□□□ -0.78
CHRNA4-201ENST00000370263 SETXQ7Z333 2677 aaKnown RBP10.2□□□□□ -0.78
CHRNA4-201ENST00000370263 DSPP15924 2871 aaKnown RBP10.17□□□□□ -0.78
CHRNA4-201ENST00000370263 VPS13AQ96RL7 3174 aa10.17□□□□□ -0.78
CHRNA4-201ENST00000370263 RPS29P62273 56 aaKnown RBP10.16□□□□□ -0.78
CHRNA4-201ENST00000370263 Q6ZRN7 208 aaPredicted RBP10.14□□□□□ -0.79
CHRNA4-201ENST00000370263 KALRNO60229 2985 aa10.14□□□□□ -0.79
CHRNA4-201ENST00000370263 BAHCC1Q9P281 2608 aa10.14□□□□□ -0.79
CHRNA4-201ENST00000370263 NBEAQ8NFP9 2946 aa10.12□□□□□ -0.79
CHRNA4-201ENST00000370263 A8MUU9 505 aa10.11□□□□□ -0.79
CHRNA4-201ENST00000370263 UBR5O95071 2799 aaPredicted RBP10.11□□□□□ -0.79
CHRNA4-201ENST00000370263 ITPR1Q14643 2758 aa10.1□□□□□ -0.79
CHRNA4-201ENST00000370263 Q5VSD8 79 aa10.1□□□□□ -0.79
CHRNA4-201ENST00000370263 KRTAP13-2Q52LG2 175 aa10.09□□□□□ -0.79
CHRNA4-201ENST00000370263 STAB2Q8WWQ8 2551 aa10.09□□□□□ -0.79
CHRNA4-201ENST00000370263 BRCA2P51587 3418 aa10.08□□□□□ -0.8
CHRNA4-201ENST00000370263 UNC80Q8N2C7 3258 aa10.07□□□□□ -0.8
CHRNA4-201ENST00000370263 PLAC4Q8WY50 150 aa10.04□□□□□ -0.8
CHRNA4-201ENST00000370263 XIRP2A4UGR9 3374 aa10.01□□□□□ -0.81
CHRNA4-201ENST00000370263 PRUNE2Q8WUY3 3088 aa9.97□□□□□ -0.81
CHRNA4-201ENST00000370263 CELSR3Q9NYQ7 3312 aa9.95□□□□□ -0.82
CHRNA4-201ENST00000370263 NSD1Q96L73 2696 aaPredicted RBP9.94□□□□□ -0.82
CHRNA4-201ENST00000370263 IGSF10Q6WRI0 2623 aa9.92□□□□□ -0.82
CHRNA4-201ENST00000370263 APCP25054 2843 aa9.91□□□□□ -0.82
CHRNA4-201ENST00000370263 C20orf166-AS1Q96NR2 134 aa9.89□□□□□ -0.83
CHRNA4-201ENST00000370263 ASH1LQ9NR48 2969 aaKnown RBP9.88□□□□□ -0.83
CHRNA4-201ENST00000370263 H0YAA0 97 aa9.81□□□□□ -0.84
CHRNA4-201ENST00000370263 DMXL2Q8TDJ6 3036 aa9.81□□□□□ -0.84
CHRNA4-201ENST00000370263 ADGRG4Q8IZF6 3080 aa9.8□□□□□ -0.84
CHRNA4-201ENST00000370263 ITPR2Q14571 2701 aa9.79□□□□□ -0.84
CHRNA4-201ENST00000370263 LRBAP50851 2863 aa9.78□□□□□ -0.84
CHRNA4-201ENST00000370263 C10orf95Q9H7T3 257 aa9.77□□□□□ -0.85
CHRNA4-201ENST00000370263 UTP20O75691 2785 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms