RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 KRTAP1-3Q8IUG1 177 aa6.58□□□□□ -1.36
PRDM1-201ENST00000369089 LY6G6CO95867 125 aa6.58□□□□□ -1.36
PRDM1-201ENST00000369089 C15orf56Q8N910 161 aa6.58□□□□□ -1.36
PRDM1-201ENST00000369089 CR1P17927 2039 aa6.58□□□□□ -1.36
PRDM1-201ENST00000369089 PLA2G2DQ9UNK4 145 aa6.57□□□□□ -1.36
PRDM1-201ENST00000369089 CHD6Q8TD26 2715 aa6.57□□□□□ -1.36
PRDM1-201ENST00000369089 FAM168BA1KXE4 195 aa6.57□□□□□ -1.36
PRDM1-201ENST00000369089 IGLV5-37A0A075B6J1 123 aa6.56□□□□□ -1.36
PRDM1-201ENST00000369089 CSNK1G2-AS1Q8NCQ2 148 aa6.56□□□□□ -1.36
PRDM1-201ENST00000369089 C19orf73Q9NVV2 129 aa6.55□□□□□ -1.36
PRDM1-201ENST00000369089 LINC01556Q5JQF7 62 aa6.55□□□□□ -1.36
PRDM1-201ENST00000369089 DNAH14Q0VDD8 3507 aa6.55□□□□□ -1.36
PRDM1-201ENST00000369089 COL6A3P12111 3177 aa6.54□□□□□ -1.36
PRDM1-201ENST00000369089 KRTAP29-1A8MX34 341 aaPredicted RBP6.54□□□□□ -1.36
PRDM1-201ENST00000369089 H3BNG1 76 aa6.54□□□□□ -1.36
PRDM1-201ENST00000369089 DNAH10OSP0CZ25 163 aa6.54□□□□□ -1.36
PRDM1-201ENST00000369089 NDUFAF8A1L188 74 aa6.53□□□□□ -1.36
PRDM1-201ENST00000369089 GIG44P09565 113 aaPredicted RBP6.53□□□□□ -1.36
PRDM1-201ENST00000369089 KRTAP1-1Q07627 177 aa6.52□□□□□ -1.37
PRDM1-201ENST00000369089 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
PRDM1-201ENST00000369089 FRYLO94915 3013 aa6.52□□□□□ -1.37
PRDM1-201ENST00000369089 A0A1B0GU33 70 aa6.52□□□□□ -1.37
PRDM1-201ENST00000369089 UNC79Q9P2D8 2635 aa6.52□□□□□ -1.37
PRDM1-201ENST00000369089 RTL8CO15255 209 aa6.52□□□□□ -1.37
PRDM1-201ENST00000369089 TEX15Q9BXT5 2789 aa6.51□□□□□ -1.37
PRDM1-201ENST00000369089 FLNCQ14315 2725 aa6.51□□□□□ -1.37
PRDM1-201ENST00000369089 KRTAP10-3P60369 221 aa6.51□□□□□ -1.37
PRDM1-201ENST00000369089 NBEAQ8NFP9 2946 aa6.5□□□□□ -1.37
PRDM1-201ENST00000369089 BOD1L1Q8NFC6 3051 aa6.49□□□□□ -1.37
PRDM1-201ENST00000369089 STAB1Q9NY15 2570 aa6.48□□□□□ -1.37
PRDM1-201ENST00000369089 TNP2Q05952 138 aa6.48□□□□□ -1.37
PRDM1-201ENST00000369089 ATMQ13315 3056 aa6.47□□□□□ -1.37
PRDM1-201ENST00000369089 LINC00472Q9H8W2 130 aa6.47□□□□□ -1.37
PRDM1-201ENST00000369089 APLNQ9ULZ1 77 aa6.47□□□□□ -1.37
PRDM1-201ENST00000369089 COL6A5A8TX70 2615 aa6.47□□□□□ -1.37
PRDM1-201ENST00000369089 DMXL2Q8TDJ6 3036 aa6.46□□□□□ -1.37
PRDM1-201ENST00000369089 ADGRG4Q8IZF6 3080 aa6.46□□□□□ -1.38
PRDM1-201ENST00000369089 SEC61BP60468 96 aaKnown RBP6.46□□□□□ -1.38
PRDM1-201ENST00000369089 FREM2Q5SZK8 3169 aa6.45□□□□□ -1.38
PRDM1-201ENST00000369089 IGLV5-52A0A0A0MRZ9 124 aa6.44□□□□□ -1.38
PRDM1-201ENST00000369089 SETXQ7Z333 2677 aaKnown RBP6.44□□□□□ -1.38
PRDM1-201ENST00000369089 KRTAP10-11P60412 298 aa6.43□□□□□ -1.38
PRDM1-201ENST00000369089 NOTCH1P46531 2555 aa6.43□□□□□ -1.38
PRDM1-201ENST00000369089 UBR5O95071 2799 aaPredicted RBP6.43□□□□□ -1.38
PRDM1-201ENST00000369089 TNRC18O15417 2968 aaPredicted RBP6.42□□□□□ -1.38
PRDM1-201ENST00000369089 COL12A1Q99715 3063 aa6.42□□□□□ -1.38
PRDM1-201ENST00000369089 SPRR1AP35321 89 aa6.41□□□□□ -1.38
PRDM1-201ENST00000369089 REV3LO60673 3130 aa6.41□□□□□ -1.38
PRDM1-201ENST00000369089 ZNF861PO60384 105 aa6.41□□□□□ -1.38
PRDM1-201ENST00000369089 GCN1Q92616 2671 aaKnown RBP6.41□□□□□ -1.38
PRDM1-201ENST00000369089 EYSQ5T1H1 3165 aa6.41□□□□□ -1.38
PRDM1-201ENST00000369089 SPEGQ15772 3267 aa6.4□□□□□ -1.39
PRDM1-201ENST00000369089 K7EIL1 84 aa6.39□□□□□ -1.39
PRDM1-201ENST00000369089 C20orf166-AS1Q96NR2 134 aa6.39□□□□□ -1.39
PRDM1-201ENST00000369089 LINC00483Q53H64 154 aa6.39□□□□□ -1.39
PRDM1-201ENST00000369089 A8MUU9 505 aa6.38□□□□□ -1.39
PRDM1-201ENST00000369089 KALRNO60229 2985 aa6.38□□□□□ -1.39
PRDM1-201ENST00000369089 TACC2O95359 2948 aa6.38□□□□□ -1.39
PRDM1-201ENST00000369089 PLAC8Q9NZF1 115 aa6.38□□□□□ -1.39
PRDM1-201ENST00000369089 Q8N1X5 172 aa6.37□□□□□ -1.39
PRDM1-201ENST00000369089 NBDYA0A0U1RRE5 68 aa6.36□□□□□ -1.39
PRDM1-201ENST00000369089 A0A0D9SG42 100 aa6.36□□□□□ -1.39
PRDM1-201ENST00000369089 ZZEF1O43149 2961 aa6.35□□□□□ -1.39
PRDM1-201ENST00000369089 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
PRDM1-201ENST00000369089 ITPR1Q14643 2758 aa6.34□□□□□ -1.4
PRDM1-201ENST00000369089 NBEAL2Q6ZNJ1 2754 aa6.34□□□□□ -1.4
PRDM1-201ENST00000369089 Q5W150 140 aa6.32□□□□□ -1.4
PRDM1-201ENST00000369089 SPACA4Q8TDM5 124 aa6.32□□□□□ -1.4
PRDM1-201ENST00000369089 Q96NJ1 140 aa6.32□□□□□ -1.4
PRDM1-201ENST00000369089 DMXL1Q9Y485 3027 aa6.32□□□□□ -1.4
PRDM1-201ENST00000369089 CASC10Q5T4H9 136 aa6.31□□□□□ -1.4
PRDM1-201ENST00000369089 LRBAP50851 2863 aa6.31□□□□□ -1.4
PRDM1-201ENST00000369089 KRTAP26-1Q6PEX3 210 aa6.31□□□□□ -1.4
PRDM1-201ENST00000369089 SPTBN5Q9NRC6 3674 aaKnown RBP6.31□□□□□ -1.4
PRDM1-201ENST00000369089 ITPR2Q14571 2701 aa6.3□□□□□ -1.4
PRDM1-201ENST00000369089 NBEAL1Q6ZS30 2694 aa6.29□□□□□ -1.4
PRDM1-201ENST00000369089 BAHCC1Q9P281 2608 aa6.29□□□□□ -1.4
PRDM1-201ENST00000369089 SPRR1BP22528 89 aa6.29□□□□□ -1.4
PRDM1-201ENST00000369089 CFAP47Q6ZTR5 3102 aa6.29□□□□□ -1.4
PRDM1-201ENST00000369089 RPL37P61927 97 aaKnown RBP6.27□□□□□ -1.41
PRDM1-201ENST00000369089 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
PRDM1-201ENST00000369089 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
PRDM1-201ENST00000369089 KRTAP4-16G5E9R7 235 aaPredicted RBP6.25□□□□□ -1.41
PRDM1-201ENST00000369089 UTP20O75691 2785 aaKnown RBP6.24□□□□□ -1.41
PRDM1-201ENST00000369089 LOC400499M0QZD8 3231 aa6.24□□□□□ -1.41
PRDM1-201ENST00000369089 PANO1I0J062 215 aa6.24□□□□□ -1.41
PRDM1-201ENST00000369089 WWC2-AS2Q96NR7 200 aa6.24□□□□□ -1.41
PRDM1-201ENST00000369089 NSD1Q96L73 2696 aaPredicted RBP6.23□□□□□ -1.41
PRDM1-201ENST00000369089 LINC00304Q8N9R0 145 aa6.23□□□□□ -1.41
PRDM1-201ENST00000369089 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
PRDM1-201ENST00000369089 CAMK2N1Q7Z7J9 78 aa6.22□□□□□ -1.41
PRDM1-201ENST00000369089 ZANQ9Y493 2812 aa6.21□□□□□ -1.41
PRDM1-201ENST00000369089 FLG2Q5D862 2391 aaPredicted RBP6.21□□□□□ -1.42
PRDM1-201ENST00000369089 ANAPC11Q9NYG5 84 aa6.17□□□□□ -1.42
PRDM1-201ENST00000369089 APCP25054 2843 aa6.17□□□□□ -1.42
PRDM1-201ENST00000369089 A0A087WTM6 91 aa6.16□□□□□ -1.42
PRDM1-201ENST00000369089 HIVEP1P15822 2718 aa6.16□□□□□ -1.42
PRDM1-201ENST00000369089 USP34Q70CQ2 3546 aa6.15□□□□□ -1.42
PRDM1-201ENST00000369089 ASH1LQ9NR48 2969 aaKnown RBP6.13□□□□□ -1.43
PRDM1-201ENST00000369089 MYO15AQ9UKN7 3530 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms