RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 RNF213Q63HN8 5207 aa12.62□□□□□ -0.39
ECHDC1-203ENST00000368291 A0A0G2JQZ4 141 aa12.62□□□□□ -0.39
ECHDC1-203ENST00000368291 FAM218AQ96MZ4 157 aa12.61□□□□□ -0.39
ECHDC1-203ENST00000368291 H0YGX0 51 aa12.6□□□□□ -0.39
ECHDC1-203ENST00000368291 CD164Q04900 197 aa12.6□□□□□ -0.39
ECHDC1-203ENST00000368291 K7ERJ3 54 aa12.56□□□□□ -0.4
ECHDC1-203ENST00000368291 TRIAP1O43715 76 aa12.56□□□□□ -0.4
ECHDC1-203ENST00000368291 KRTAP13-3Q3SY46 172 aa12.56□□□□□ -0.4
ECHDC1-203ENST00000368291 PPDPFLQ8WWR9 84 aa12.55□□□□□ -0.4
ECHDC1-203ENST00000368291 LIMD2Q9BT23 127 aa12.55□□□□□ -0.4
ECHDC1-203ENST00000368291 CDIP1Q9H305 208 aa12.55□□□□□ -0.4
ECHDC1-203ENST00000368291 IGLV8-61A0A075B6I0 122 aa12.53□□□□□ -0.4
ECHDC1-203ENST00000368291 F8WEM9 126 aa12.52□□□□□ -0.41
ECHDC1-203ENST00000368291 SMIM6P0DI80 62 aa12.52□□□□□ -0.41
ECHDC1-203ENST00000368291 OCIAD2Q56VL3 154 aa12.5□□□□□ -0.41
ECHDC1-203ENST00000368291 Q5XG85 94 aa12.5□□□□□ -0.41
ECHDC1-203ENST00000368291 A0A1B0GX51 115 aa12.49□□□□□ -0.41
ECHDC1-203ENST00000368291 SNCGO76070 127 aa12.48□□□□□ -0.41
ECHDC1-203ENST00000368291 IGFL1Q6UW32 110 aa12.48□□□□□ -0.41
ECHDC1-203ENST00000368291 CLEC2BQ92478 149 aa12.48□□□□□ -0.41
ECHDC1-203ENST00000368291 MUC17Q685J3 4493 aa12.48□□□□□ -0.41
ECHDC1-203ENST00000368291 SNHG12Q9BXW3 62 aa12.47□□□□□ -0.41
ECHDC1-203ENST00000368291 LOC105371267A0A1B0GV96 52 aa12.46□□□□□ -0.41
ECHDC1-203ENST00000368291 Q6JHZ5 121 aa12.46□□□□□ -0.41
ECHDC1-203ENST00000368291 PSMB2P49721 201 aa12.44□□□□□ -0.42
ECHDC1-203ENST00000368291 H3BUT2 72 aa12.42□□□□□ -0.42
ECHDC1-203ENST00000368291 NDUFV3P56181 108 aaKnown RBP12.41□□□□□ -0.42
ECHDC1-203ENST00000368291 C1orf195Q5TG92 126 aa12.41□□□□□ -0.42
ECHDC1-203ENST00000368291 COX6CP09669 75 aa12.38□□□□□ -0.43
ECHDC1-203ENST00000368291 MUC2Q02817 5179 aa12.38□□□□□ -0.43
ECHDC1-203ENST00000368291 TRBV7-7A0A0K0K1E9 115 aa12.37□□□□□ -0.43
ECHDC1-203ENST00000368291 GHRHP01286 108 aa12.34□□□□□ -0.43
ECHDC1-203ENST00000368291 FABP2P12104 132 aa12.34□□□□□ -0.43
ECHDC1-203ENST00000368291 M0R143 59 aa12.33□□□□□ -0.44
ECHDC1-203ENST00000368291 TCL1BO95988 128 aa12.33□□□□□ -0.44
ECHDC1-203ENST00000368291 DNAL4O96015 105 aa12.32□□□□□ -0.44
ECHDC1-203ENST00000368291 XP32Q5T750 250 aa12.32□□□□□ -0.44
ECHDC1-203ENST00000368291 ASB16-AS1Q495Z4 193 aa12.31□□□□□ -0.44
ECHDC1-203ENST00000368291 ORMDL1Q9P0S3 153 aa12.31□□□□□ -0.44
ECHDC1-203ENST00000368291 H3BMG7 143 aa12.3□□□□□ -0.44
ECHDC1-203ENST00000368291 TSTD3H0UI37 97 aa12.3□□□□□ -0.44
ECHDC1-203ENST00000368291 Q6Q795 121 aa12.3□□□□□ -0.44
ECHDC1-203ENST00000368291 LST1O00453 97 aa12.29□□□□□ -0.44
ECHDC1-203ENST00000368291 C9orf92A6NGG3 77 aa12.28□□□□□ -0.44
ECHDC1-203ENST00000368291 TRACP01848 142 aa12.28□□□□□ -0.44
ECHDC1-203ENST00000368291 SCGB1C2P0DMR2 95 aa12.28□□□□□ -0.44
ECHDC1-203ENST00000368291 H3BQ85 93 aa12.26□□□□□ -0.45
ECHDC1-203ENST00000368291 TEN1Q86WV5 123 aa12.26□□□□□ -0.45
ECHDC1-203ENST00000368291 TMEM256-PLSCR3K7ERE1 68 aa12.25□□□□□ -0.45
ECHDC1-203ENST00000368291 NAA38Q9BRA0 125 aaKnown RBP12.24□□□□□ -0.45
ECHDC1-203ENST00000368291 SEC61BP60468 96 aaKnown RBP12.21□□□□□ -0.45
ECHDC1-203ENST00000368291 A0A1W2PNM2 257 aa12.2□□□□□ -0.46
ECHDC1-203ENST00000368291 A0A1B0GV72 72 aa12.19□□□□□ -0.46
ECHDC1-203ENST00000368291 UBE2V1Q13404 147 aa12.19□□□□□ -0.46
ECHDC1-203ENST00000368291 KRTAP4-1Q9BYQ7 146 aa12.18□□□□□ -0.46
ECHDC1-203ENST00000368291 A0A087WSZ3 146 aa12.18□□□□□ -0.46
ECHDC1-203ENST00000368291 ANKRD29Q8N6D5 301 aa12.16□□□□□ -0.46
ECHDC1-203ENST00000368291 SS18L2Q9UHA2 77 aa12.16□□□□□ -0.46
ECHDC1-203ENST00000368291 BATFQ16520 125 aa12.15□□□□□ -0.46
ECHDC1-203ENST00000368291 BAALC-AS2P0C853 105 aa12.12□□□□□ -0.47
ECHDC1-203ENST00000368291 ATXN8Q156A1 80 aa12.12□□□□□ -0.47
ECHDC1-203ENST00000368291 Q96NJ1 140 aa12.12□□□□□ -0.47
ECHDC1-203ENST00000368291 TRBV7-4A0A0J9YYF1 115 aa12.1□□□□□ -0.47
ECHDC1-203ENST00000368291 A0A0U1RQV1 116 aa12.08□□□□□ -0.48
ECHDC1-203ENST00000368291 PCOTHQ58A44 107 aa12.07□□□□□ -0.48
ECHDC1-203ENST00000368291 CCKP06307 115 aa12.06□□□□□ -0.48
ECHDC1-203ENST00000368291 RBM3P98179 157 aaKnown RBP12.05□□□□□ -0.48
ECHDC1-203ENST00000368291 FAT4Q6V0I7 4981 aa12.05□□□□□ -0.48
ECHDC1-203ENST00000368291 TAX1BP3O14907 124 aa12.04□□□□□ -0.48
ECHDC1-203ENST00000368291 RPL37P61927 97 aaKnown RBP12.04□□□□□ -0.48
ECHDC1-203ENST00000368291 LYRM7Q5U5X0 104 aa12.03□□□□□ -0.48
ECHDC1-203ENST00000368291 C9orf118A6NHY6 69 aa12.02□□□□□ -0.49
ECHDC1-203ENST00000368291 TRBV20-1A0A075B6N2 111 aa12.01□□□□□ -0.49
ECHDC1-203ENST00000368291 OBSCN-AS1Q96MR7 158 aa12.01□□□□□ -0.49
ECHDC1-203ENST00000368291 DSCR8Q96T75 97 aa12.01□□□□□ -0.49
ECHDC1-203ENST00000368291 LCE2AQ5TA79 106 aaPredicted RBP11.96□□□□□ -0.49
ECHDC1-203ENST00000368291 VPS25Q9BRG1 176 aa11.96□□□□□ -0.49
ECHDC1-203ENST00000368291 LINC00472Q9H8W2 130 aa11.96□□□□□ -0.49
ECHDC1-203ENST00000368291 A0A1W2PPM0 123 aa11.95□□□□□ -0.5
ECHDC1-203ENST00000368291 C9JAW5 83 aa11.95□□□□□ -0.5
ECHDC1-203ENST00000368291 JMJD7-PLA2G4BH0Y9G9 81 aa11.92□□□□□ -0.5
ECHDC1-203ENST00000368291 IGKV4-1P06312 121 aa11.92□□□□□ -0.5
ECHDC1-203ENST00000368291 DEFB116Q30KQ4 102 aa11.92□□□□□ -0.5
ECHDC1-203ENST00000368291 Q6ZQT0 140 aa11.92□□□□□ -0.5
ECHDC1-203ENST00000368291 SIGMAR1Q99720 223 aa11.92□□□□□ -0.5
ECHDC1-203ENST00000368291 Q75L30 129 aa11.91□□□□□ -0.5
ECHDC1-203ENST00000368291 LOC110117498A0A087WWA1 95 aa11.89□□□□□ -0.51
ECHDC1-203ENST00000368291 DSCR10P59022 87 aa11.87□□□□□ -0.51
ECHDC1-203ENST00000368291 C14orf132Q9NPU4 83 aa11.87□□□□□ -0.51
ECHDC1-203ENST00000368291 KRTAP19-2Q3LHN2 52 aa11.85□□□□□ -0.51
ECHDC1-203ENST00000368291 MTURNQ8N3F0 131 aa11.85□□□□□ -0.51
ECHDC1-203ENST00000368291 C20orf166-AS1Q96NR2 134 aa11.85□□□□□ -0.51
ECHDC1-203ENST00000368291 A8MUU9 505 aa11.83□□□□□ -0.52
ECHDC1-203ENST00000368291 H3BT86 120 aa11.83□□□□□ -0.52
ECHDC1-203ENST00000368291 PDE6GP18545 87 aa11.82□□□□□ -0.52
ECHDC1-203ENST00000368291 C21orf62-AS1Q17RA5 79 aa11.82□□□□□ -0.52
ECHDC1-203ENST00000368291 NOTCH2NLQ7Z3S9 236 aa11.82□□□□□ -0.52
ECHDC1-203ENST00000368291 LINC00313P59037 77 aa11.81□□□□□ -0.52
ECHDC1-203ENST00000368291 LCE2CQ5TA81 110 aa11.81□□□□□ -0.52
ECHDC1-203ENST00000368291 KRTAP16-1A8MUX0 517 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms