RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 DEFB105AQ8NG35 78 aa5.62□□□□□ -1.51
CD48-202ENST00000368046 NHP2Q9NX24 153 aaKnown RBP5.62□□□□□ -1.51
CD48-202ENST00000368046 PAM16Q9Y3D7 125 aa5.62□□□□□ -1.51
CD48-202ENST00000368046 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
CD48-202ENST00000368046 C9orf118A6NHY6 69 aa5.61□□□□□ -1.51
CD48-202ENST00000368046 RPS29P62273 56 aaKnown RBP5.61□□□□□ -1.51
CD48-202ENST00000368046 C9orf153Q5TBE3 101 aa5.61□□□□□ -1.51
CD48-202ENST00000368046 VAMP8Q9BV40 100 aa5.61□□□□□ -1.51
CD48-202ENST00000368046 HIGD1BQ9P298 99 aa5.61□□□□□ -1.51
CD48-202ENST00000368046 FP248Q71RG6 208 aaPredicted RBP5.6□□□□□ -1.51
CD48-202ENST00000368046 IGLV5-48A0A075B6I7 105 aa5.59□□□□□ -1.51
CD48-202ENST00000368046 SLC25A20O43772 301 aa5.59□□□□□ -1.51
CD48-202ENST00000368046 LINC01547P58512 204 aaPredicted RBP5.59□□□□□ -1.51
CD48-202ENST00000368046 TPRXLQ17RH7 258 aa5.59□□□□□ -1.51
CD48-202ENST00000368046 LINC00575Q6W349 94 aa5.58□□□□□ -1.52
CD48-202ENST00000368046 SMIM29Q86T20 159 aa5.58□□□□□ -1.52
CD48-202ENST00000368046 Q8N377 158 aa5.58□□□□□ -1.52
CD48-202ENST00000368046 hADV29S1A0JD25 119 aa5.57□□□□□ -1.52
CD48-202ENST00000368046 CFC1BP0CG36 223 aa5.57□□□□□ -1.52
CD48-202ENST00000368046 CFC1P0CG37 223 aa5.57□□□□□ -1.52
CD48-202ENST00000368046 Q1RN00 199 aa5.57□□□□□ -1.52
CD48-202ENST00000368046 PYY3Q5JQD4 70 aa5.57□□□□□ -1.52
CD48-202ENST00000368046 BVES-AS1Q5T3Y7 98 aa5.57□□□□□ -1.52
CD48-202ENST00000368046 PRO1933Q9H354 126 aa5.57□□□□□ -1.52
CD48-202ENST00000368046 C2orf91Q6ZV80 131 aa5.56□□□□□ -1.52
CD48-202ENST00000368046 C12orf57Q99622 126 aa5.56□□□□□ -1.52
CD48-202ENST00000368046 CD164Q04900 197 aa5.55□□□□□ -1.52
CD48-202ENST00000368046 RAB37Q96AX2 223 aa5.55□□□□□ -1.52
CD48-202ENST00000368046 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
CD48-202ENST00000368046 CEND1Q8N111 149 aa5.54□□□□□ -1.52
CD48-202ENST00000368046 TMA7Q9Y2S6 64 aaKnown RBP5.54□□□□□ -1.52
CD48-202ENST00000368046 A0A0B4J2C4 111 aa5.53□□□□□ -1.52
CD48-202ENST00000368046 HRCT1Q6UXD1 115 aa5.53□□□□□ -1.52
CD48-202ENST00000368046 Q6ZQY7 126 aa5.53□□□□□ -1.52
CD48-202ENST00000368046 LIMD2Q9BT23 127 aa5.53□□□□□ -1.52
CD48-202ENST00000368046 MUC2Q02817 5179 aa5.53□□□□□ -1.52
CD48-202ENST00000368046 H0YGX0 51 aa5.52□□□□□ -1.53
CD48-202ENST00000368046 H7C2G1 150 aa5.52□□□□□ -1.53
CD48-202ENST00000368046 SNCGO76070 127 aa5.52□□□□□ -1.53
CD48-202ENST00000368046 KRTAP13-3Q3SY46 172 aa5.52□□□□□ -1.53
CD48-202ENST00000368046 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.52□□□□□ -1.53
CD48-202ENST00000368046 PRO1854Q9UHT4 67 aa5.51□□□□□ -1.53
CD48-202ENST00000368046 Q5XG85 94 aa5.5□□□□□ -1.53
CD48-202ENST00000368046 PPDPFLQ8WWR9 84 aa5.5□□□□□ -1.53
CD48-202ENST00000368046 F8WEM9 126 aa5.49□□□□□ -1.53
CD48-202ENST00000368046 FXYD2P54710 66 aa5.49□□□□□ -1.53
CD48-202ENST00000368046 OCIAD2Q56VL3 154 aa5.49□□□□□ -1.53
CD48-202ENST00000368046 A0A0G2JQZ4 141 aa5.48□□□□□ -1.53
CD48-202ENST00000368046 HSD52Q0P140 79 aa5.48□□□□□ -1.53
CD48-202ENST00000368046 SNHG12Q9BXW3 62 aa5.48□□□□□ -1.53
CD48-202ENST00000368046 UQCR10Q9UDW1 63 aa5.48□□□□□ -1.53
CD48-202ENST00000368046 IGLV8-61A0A075B6I0 122 aa5.47□□□□□ -1.53
CD48-202ENST00000368046 C21orf62-AS1Q17RA5 79 aa5.47□□□□□ -1.53
CD48-202ENST00000368046 Q6JHZ5 121 aa5.47□□□□□ -1.53
CD48-202ENST00000368046 A0A1B0GX51 115 aa5.46□□□□□ -1.54
CD48-202ENST00000368046 TCL1BO95988 128 aa5.45□□□□□ -1.54
CD48-202ENST00000368046 FAM218AQ96MZ4 157 aa5.45□□□□□ -1.54
CD48-202ENST00000368046 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
CD48-202ENST00000368046 C1orf195Q5TG92 126 aa5.44□□□□□ -1.54
CD48-202ENST00000368046 IGFL1Q6UW32 110 aa5.44□□□□□ -1.54
CD48-202ENST00000368046 TRIAP1O43715 76 aa5.43□□□□□ -1.54
CD48-202ENST00000368046 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
CD48-202ENST00000368046 CLEC2BQ92478 149 aa5.43□□□□□ -1.54
CD48-202ENST00000368046 A0A0U1RQV1 116 aa5.42□□□□□ -1.54
CD48-202ENST00000368046 COX6CP09669 75 aa5.42□□□□□ -1.54
CD48-202ENST00000368046 PSMB2P49721 201 aa5.42□□□□□ -1.54
CD48-202ENST00000368046 NDUFV3P56181 108 aaKnown RBP5.42□□□□□ -1.54
CD48-202ENST00000368046 SEC61BP60468 96 aaKnown RBP5.42□□□□□ -1.54
CD48-202ENST00000368046 TRBV7-7A0A0K0K1E9 115 aa5.4□□□□□ -1.54
CD48-202ENST00000368046 K7ERJ3 54 aa5.4□□□□□ -1.54
CD48-202ENST00000368046 C9orf92A6NGG3 77 aa5.39□□□□□ -1.55
CD48-202ENST00000368046 H3BMG7 143 aa5.39□□□□□ -1.55
CD48-202ENST00000368046 H3BQ85 93 aa5.39□□□□□ -1.55
CD48-202ENST00000368046 H3BUT2 72 aa5.39□□□□□ -1.55
CD48-202ENST00000368046 FABP2P12104 132 aa5.39□□□□□ -1.55
CD48-202ENST00000368046 DNAL4O96015 105 aa5.38□□□□□ -1.55
CD48-202ENST00000368046 Q6Q795 121 aa5.38□□□□□ -1.55
CD48-202ENST00000368046 TEN1Q86WV5 123 aa5.38□□□□□ -1.55
CD48-202ENST00000368046 ORMDL1Q9P0S3 153 aa5.37□□□□□ -1.55
CD48-202ENST00000368046 TMEM256-PLSCR3K7ERE1 68 aa5.36□□□□□ -1.55
CD48-202ENST00000368046 SCGB1C2P0DMR2 95 aa5.36□□□□□ -1.55
CD48-202ENST00000368046 LST1O00453 97 aa5.35□□□□□ -1.55
CD48-202ENST00000368046 SMIM6P0DI80 62 aa5.35□□□□□ -1.55
CD48-202ENST00000368046 SS18L2Q9UHA2 77 aa5.35□□□□□ -1.55
CD48-202ENST00000368046 TRACP01848 142 aa5.34□□□□□ -1.55
CD48-202ENST00000368046 KRTAP4-1Q9BYQ7 146 aa5.34□□□□□ -1.55
CD48-202ENST00000368046 M0R143 59 aa5.33□□□□□ -1.56
CD48-202ENST00000368046 ANKRD29Q8N6D5 301 aa5.33□□□□□ -1.56
CD48-202ENST00000368046 UBE2V1Q13404 147 aa5.32□□□□□ -1.56
CD48-202ENST00000368046 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
CD48-202ENST00000368046 A0A087WSZ3 146 aa5.31□□□□□ -1.56
CD48-202ENST00000368046 A0A1W2PNM2 257 aa5.31□□□□□ -1.56
CD48-202ENST00000368046 PCOTHQ58A44 107 aa5.31□□□□□ -1.56
CD48-202ENST00000368046 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
CD48-202ENST00000368046 LOC105371267A0A1B0GV96 52 aa5.3□□□□□ -1.56
CD48-202ENST00000368046 TSTD3H0UI37 97 aa5.3□□□□□ -1.56
CD48-202ENST00000368046 BAALC-AS2P0C853 105 aa5.29□□□□□ -1.56
CD48-202ENST00000368046 RPL37P61927 97 aaKnown RBP5.29□□□□□ -1.56
CD48-202ENST00000368046 A0A1B0GV72 72 aa5.27□□□□□ -1.57
CD48-202ENST00000368046 RBM3P98179 157 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms