RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 BAHCC1Q9P281 2608 aa2.37□□□□□ -2.03
SYNE1-207ENST00000367255 A0A0D9SG42 100 aa2.37□□□□□ -2.03
SYNE1-207ENST00000367255 IGLV5-52A0A0A0MRZ9 124 aa2.36□□□□□ -2.03
SYNE1-207ENST00000367255 COL27A1Q8IZC6 1860 aaPredicted RBP2.35□□□□□ -2.03
SYNE1-207ENST00000367255 SPINT4Q6UDR6 99 aa2.35□□□□□ -2.03
SYNE1-207ENST00000367255 FLNAP21333 2647 aaKnown RBP2.35□□□□□ -2.03
SYNE1-207ENST00000367255 IGKV2D-30A0A075B6S6 120 aa2.35□□□□□ -2.03
SYNE1-207ENST00000367255 IGKV2-30P06310 120 aa2.35□□□□□ -2.03
SYNE1-207ENST00000367255 A0A096LNT2 108 aa2.34□□□□□ -2.03
SYNE1-207ENST00000367255 SPACA4Q8TDM5 124 aa2.34□□□□□ -2.04
SYNE1-207ENST00000367255 C9orf92A6NGG3 77 aa2.34□□□□□ -2.04
SYNE1-207ENST00000367255 PLAC8Q9NZF1 115 aa2.33□□□□□ -2.04
SYNE1-207ENST00000367255 AKAP13Q12802 2813 aa2.33□□□□□ -2.04
SYNE1-207ENST00000367255 TENM3Q9P273 2699 aa2.33□□□□□ -2.04
SYNE1-207ENST00000367255 LINC00304Q8N9R0 145 aa2.33□□□□□ -2.04
SYNE1-207ENST00000367255 RTL8CO15255 209 aa2.33□□□□□ -2.04
SYNE1-207ENST00000367255 H3BS24 57 aa2.33□□□□□ -2.04
SYNE1-207ENST00000367255 MMP24-AS1A0A0U1RRL7 71 aa2.33□□□□□ -2.04
SYNE1-207ENST00000367255 A8MU10 97 aa2.33□□□□□ -2.04
SYNE1-207ENST00000367255 CSAG1Q6PB30 78 aa2.33□□□□□ -2.04
SYNE1-207ENST00000367255 KRTAP4-16G5E9R7 235 aaPredicted RBP2.32□□□□□ -2.04
SYNE1-207ENST00000367255 GIG44P09565 113 aaPredicted RBP2.32□□□□□ -2.04
SYNE1-207ENST00000367255 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.32□□□□□ -2.04
SYNE1-207ENST00000367255 A8MUU9 505 aa2.32□□□□□ -2.04
SYNE1-207ENST00000367255 KRTAP25-1Q3LHN0 102 aa2.32□□□□□ -2.04
SYNE1-207ENST00000367255 APLNQ9ULZ1 77 aa2.31□□□□□ -2.04
SYNE1-207ENST00000367255 Q8N1X5 172 aa2.31□□□□□ -2.04
SYNE1-207ENST00000367255 PANO1I0J062 215 aa2.31□□□□□ -2.04
SYNE1-207ENST00000367255 SMR3BP02814 79 aaPredicted RBP2.31□□□□□ -2.04
SYNE1-207ENST00000367255 OXTP01178 125 aa2.31□□□□□ -2.04
SYNE1-207ENST00000367255 K7EIL1 84 aa2.31□□□□□ -2.04
SYNE1-207ENST00000367255 ADM2Q7Z4H4 148 aa2.3□□□□□ -2.04
SYNE1-207ENST00000367255 RANBP2P49792 3224 aaKnown RBP2.3□□□□□ -2.04
SYNE1-207ENST00000367255 H0YAA0 97 aa2.3□□□□□ -2.04
SYNE1-207ENST00000367255 KRTAP23-1A1A580 65 aa2.3□□□□□ -2.04
SYNE1-207ENST00000367255 CHD7Q9P2D1 2997 aa2.3□□□□□ -2.04
SYNE1-207ENST00000367255 A0A0C4DFX4 3053 aa2.29□□□□□ -2.04
SYNE1-207ENST00000367255 IGSF10Q6WRI0 2623 aa2.28□□□□□ -2.04
SYNE1-207ENST00000367255 CHD9Q3L8U1 2897 aa2.28□□□□□ -2.04
SYNE1-207ENST00000367255 TYMSOSQ8TAI1 123 aa2.27□□□□□ -2.05
SYNE1-207ENST00000367255 HIVEP1P15822 2718 aa2.27□□□□□ -2.05
SYNE1-207ENST00000367255 KRTAP10-3P60369 221 aa2.27□□□□□ -2.05
SYNE1-207ENST00000367255 MKI67P46013 3256 aaKnown RBP2.27□□□□□ -2.05
SYNE1-207ENST00000367255 HTTP42858 3142 aa2.27□□□□□ -2.05
SYNE1-207ENST00000367255 SPINK7P58062 85 aa2.26□□□□□ -2.05
SYNE1-207ENST00000367255 KRTAP19-4Q3LI73 84 aa2.26□□□□□ -2.05
SYNE1-207ENST00000367255 KMT2BQ9UMN6 2715 aaPredicted RBP2.26□□□□□ -2.05
SYNE1-207ENST00000367255 UBR5O95071 2799 aaPredicted RBP2.26□□□□□ -2.05
SYNE1-207ENST00000367255 ITPR1Q14643 2758 aa2.26□□□□□ -2.05
SYNE1-207ENST00000367255 H1FX-AS1Q4G0G2 97 aa2.26□□□□□ -2.05
SYNE1-207ENST00000367255 Q5W150 140 aa2.25□□□□□ -2.05
SYNE1-207ENST00000367255 LAMA2P24043 3122 aaKnown RBP2.25□□□□□ -2.05
SYNE1-207ENST00000367255 Q96NJ1 140 aa2.25□□□□□ -2.05
SYNE1-207ENST00000367255 TRIOO75962 3097 aa2.25□□□□□ -2.05
SYNE1-207ENST00000367255 PLAC4Q8WY50 150 aa2.25□□□□□ -2.05
SYNE1-207ENST00000367255 Q8NDZ9 215 aa2.24□□□□□ -2.05
SYNE1-207ENST00000367255 C5orf42Q9H799 3197 aa2.24□□□□□ -2.05
SYNE1-207ENST00000367255 NDUFAF8A1L188 74 aa2.23□□□□□ -2.05
SYNE1-207ENST00000367255 A0A087WTM6 91 aa2.23□□□□□ -2.05
SYNE1-207ENST00000367255 TNP1P09430 55 aa2.23□□□□□ -2.05
SYNE1-207ENST00000367255 WWC2-AS2Q96NR7 200 aa2.23□□□□□ -2.05
SYNE1-207ENST00000367255 KRTAP11-1Q8IUC1 163 aa2.22□□□□□ -2.05
SYNE1-207ENST00000367255 PRUNE2Q8WUY3 3088 aa2.22□□□□□ -2.05
SYNE1-207ENST00000367255 C20orf166-AS1Q96NR2 134 aa2.22□□□□□ -2.05
SYNE1-207ENST00000367255 UTP20O75691 2785 aaKnown RBP2.22□□□□□ -2.05
SYNE1-207ENST00000367255 LAMA3Q16787 3333 aa2.22□□□□□ -2.05
SYNE1-207ENST00000367255 Q5VSD8 79 aa2.21□□□□□ -2.06
SYNE1-207ENST00000367255 INE1O15225 51 aa2.21□□□□□ -2.06
SYNE1-207ENST00000367255 KRTAP10-11P60412 298 aa2.21□□□□□ -2.06
SYNE1-207ENST00000367255 KRTAP13-1Q8IUC0 172 aa2.21□□□□□ -2.06
SYNE1-207ENST00000367255 CFAP54Q96N23 3096 aa2.21□□□□□ -2.06
SYNE1-207ENST00000367255 ITPR2Q14571 2701 aa2.21□□□□□ -2.06
SYNE1-207ENST00000367255 BRCA2P51587 3418 aa2.21□□□□□ -2.06
SYNE1-207ENST00000367255 WDFY4Q6ZS81 3184 aa2.2□□□□□ -2.06
SYNE1-207ENST00000367255 UNC80Q8N2C7 3258 aa2.2□□□□□ -2.06
SYNE1-207ENST00000367255 KRTAP21-3Q3LHN1 58 aa2.2□□□□□ -2.06
SYNE1-207ENST00000367255 KRTAP26-1Q6PEX3 210 aa2.19□□□□□ -2.06
SYNE1-207ENST00000367255 MGAQ8IWI9 3026 aa2.19□□□□□ -2.06
SYNE1-207ENST00000367255 TRANK1O15050 2925 aa2.18□□□□□ -2.06
SYNE1-207ENST00000367255 S4R3F8 94 aa2.18□□□□□ -2.06
SYNE1-207ENST00000367255 BPTFQ12830 3046 aa2.18□□□□□ -2.06
SYNE1-207ENST00000367255 Q6ZSA8 131 aa2.17□□□□□ -2.06
SYNE1-207ENST00000367255 KRTAP24-1Q3LI83 254 aa2.17□□□□□ -2.06
SYNE1-207ENST00000367255 TEX15Q9BXT5 2789 aa2.17□□□□□ -2.06
SYNE1-207ENST00000367255 R4GN34 69 aa2.16□□□□□ -2.06
SYNE1-207ENST00000367255 KALRNO60229 2985 aa2.16□□□□□ -2.06
SYNE1-207ENST00000367255 DSPP15924 2871 aaKnown RBP2.16□□□□□ -2.06
SYNE1-207ENST00000367255 Q6ZRN7 208 aaPredicted RBP2.15□□□□□ -2.06
SYNE1-207ENST00000367255 P0C880 135 aa2.15□□□□□ -2.07
SYNE1-207ENST00000367255 TENM4Q6N022 2769 aa2.15□□□□□ -2.07
SYNE1-207ENST00000367255 FLNCQ14315 2725 aa2.15□□□□□ -2.07
SYNE1-207ENST00000367255 VPS13AQ96RL7 3174 aa2.14□□□□□ -2.07
SYNE1-207ENST00000367255 NBEAL2Q6ZNJ1 2754 aa2.14□□□□□ -2.07
SYNE1-207ENST00000367255 NBEAQ8NFP9 2946 aa2.14□□□□□ -2.07
SYNE1-207ENST00000367255 TENM1Q9UKZ4 2725 aa2.12□□□□□ -2.07
SYNE1-207ENST00000367255 XIRP2A4UGR9 3374 aa2.11□□□□□ -2.07
SYNE1-207ENST00000367255 FRYLO94915 3013 aa2.1□□□□□ -2.07
SYNE1-207ENST00000367255 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
SYNE1-207ENST00000367255 SZT2Q5T011 3432 aa2.09□□□□□ -2.07
SYNE1-207ENST00000367255 FREM2Q5SZK8 3169 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 269.9 ms