RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 CDH23Q9H251 3354 aa4.89□□□□□ -1.63
CTNND1-204ENST00000361796 DMAC1Q96GE9 116 aa4.89□□□□□ -1.63
CTNND1-204ENST00000361796 KRTAP1-5Q9BYS1 174 aa4.89□□□□□ -1.63
CTNND1-204ENST00000361796 LCE6AA0A183 80 aa4.88□□□□□ -1.63
CTNND1-204ENST00000361796 Q5VV11 94 aa4.88□□□□□ -1.63
CTNND1-204ENST00000361796 LINC01558Q9Y6Z2 57 aa4.88□□□□□ -1.63
CTNND1-204ENST00000361796 R4GN34 69 aa4.88□□□□□ -1.63
CTNND1-204ENST00000361796 CHD7Q9P2D1 2997 aa4.86□□□□□ -1.63
CTNND1-204ENST00000361796 OXTP01178 125 aa4.85□□□□□ -1.63
CTNND1-204ENST00000361796 SPRR1AP35321 89 aa4.85□□□□□ -1.63
CTNND1-204ENST00000361796 LINC00472Q9H8W2 130 aa4.85□□□□□ -1.63
CTNND1-204ENST00000361796 HECTD1Q9ULT8 2610 aa4.85□□□□□ -1.63
CTNND1-204ENST00000361796 CFAP54Q96N23 3096 aa4.85□□□□□ -1.63
CTNND1-204ENST00000361796 USP24Q9UPU5 2620 aa4.84□□□□□ -1.63
CTNND1-204ENST00000361796 H1FX-AS1Q4G0G2 97 aa4.84□□□□□ -1.63
CTNND1-204ENST00000361796 KRTAP10-2P60368 255 aa4.83□□□□□ -1.64
CTNND1-204ENST00000361796 KRTAP26-1Q6PEX3 210 aa4.83□□□□□ -1.64
CTNND1-204ENST00000361796 KRTAP10-1P60331 282 aa4.82□□□□□ -1.64
CTNND1-204ENST00000361796 KRTAP16-1A8MUX0 517 aa4.82□□□□□ -1.64
CTNND1-204ENST00000361796 DNAH14Q0VDD8 3507 aa4.81□□□□□ -1.64
CTNND1-204ENST00000361796 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
CTNND1-204ENST00000361796 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
CTNND1-204ENST00000361796 PANO1I0J062 215 aa4.8□□□□□ -1.64
CTNND1-204ENST00000361796 MYO15AQ9UKN7 3530 aa4.8□□□□□ -1.64
CTNND1-204ENST00000361796 A0A0C4DFX4 3053 aa4.8□□□□□ -1.64
CTNND1-204ENST00000361796 SPTBN5Q9NRC6 3674 aaKnown RBP4.8□□□□□ -1.64
CTNND1-204ENST00000361796 EYSQ5T1H1 3165 aa4.79□□□□□ -1.64
CTNND1-204ENST00000361796 M0QZ58 72 aa4.78□□□□□ -1.64
CTNND1-204ENST00000361796 EPG5Q9HCE0 2579 aa4.77□□□□□ -1.65
CTNND1-204ENST00000361796 FLNAP21333 2647 aaKnown RBP4.77□□□□□ -1.65
CTNND1-204ENST00000361796 SPRR1BP22528 89 aa4.77□□□□□ -1.65
CTNND1-204ENST00000361796 ROMO1P60602 79 aa4.76□□□□□ -1.65
CTNND1-204ENST00000361796 ADM2Q7Z4H4 148 aa4.76□□□□□ -1.65
CTNND1-204ENST00000361796 HTTP42858 3142 aa4.75□□□□□ -1.65
CTNND1-204ENST00000361796 LAMA2P24043 3122 aaKnown RBP4.74□□□□□ -1.65
CTNND1-204ENST00000361796 RPL37P61927 97 aaKnown RBP4.74□□□□□ -1.65
CTNND1-204ENST00000361796 ITPR3Q14573 2671 aa4.74□□□□□ -1.65
CTNND1-204ENST00000361796 TRIOO75962 3097 aa4.74□□□□□ -1.65
CTNND1-204ENST00000361796 Q6ZR54 194 aa4.74□□□□□ -1.65
CTNND1-204ENST00000361796 A0A087X002 238 aa4.73□□□□□ -1.65
CTNND1-204ENST00000361796 NOTCH2NLQ7Z3S9 236 aa4.73□□□□□ -1.65
CTNND1-204ENST00000361796 CELSR3Q9NYQ7 3312 aa4.72□□□□□ -1.65
CTNND1-204ENST00000361796 VCANP13611 3396 aa4.72□□□□□ -1.65
CTNND1-204ENST00000361796 UNC80Q8N2C7 3258 aa4.72□□□□□ -1.65
CTNND1-204ENST00000361796 RANBP2P49792 3224 aaKnown RBP4.72□□□□□ -1.65
CTNND1-204ENST00000361796 FLNBO75369 2602 aaKnown RBP4.69□□□□□ -1.66
CTNND1-204ENST00000361796 KRTAP11-1Q8IUC1 163 aa4.69□□□□□ -1.66
CTNND1-204ENST00000361796 ATRQ13535 2644 aa4.68□□□□□ -1.66
CTNND1-204ENST00000361796 CHD9Q3L8U1 2897 aa4.68□□□□□ -1.66
CTNND1-204ENST00000361796 MGAQ8IWI9 3026 aa4.68□□□□□ -1.66
CTNND1-204ENST00000361796 KRTAP4-16G5E9R7 235 aaPredicted RBP4.68□□□□□ -1.66
CTNND1-204ENST00000361796 PRUNE2Q8WUY3 3088 aa4.67□□□□□ -1.66
CTNND1-204ENST00000361796 FREM2Q5SZK8 3169 aa4.67□□□□□ -1.66
CTNND1-204ENST00000361796 A8MU10 97 aa4.67□□□□□ -1.66
CTNND1-204ENST00000361796 KRTAP29-1A8MX34 341 aaPredicted RBP4.65□□□□□ -1.66
CTNND1-204ENST00000361796 WDFY4Q6ZS81 3184 aa4.64□□□□□ -1.67
CTNND1-204ENST00000361796 MAST4O15021 2626 aa4.63□□□□□ -1.67
CTNND1-204ENST00000361796 C20orf166-AS1Q96NR2 134 aa4.61□□□□□ -1.67
CTNND1-204ENST00000361796 CFAP46Q8IYW2 2715 aa4.61□□□□□ -1.67
CTNND1-204ENST00000361796 TNRC18O15417 2968 aaPredicted RBP4.6□□□□□ -1.67
CTNND1-204ENST00000361796 CHD6Q8TD26 2715 aa4.6□□□□□ -1.67
CTNND1-204ENST00000361796 HELZ2Q9BYK8 2649 aaKnown RBP4.59□□□□□ -1.67
CTNND1-204ENST00000361796 KRTAP7-1Q8IUC3 87 aa4.59□□□□□ -1.67
CTNND1-204ENST00000361796 VPS13AQ96RL7 3174 aa4.58□□□□□ -1.68
CTNND1-204ENST00000361796 SPEGQ15772 3267 aa4.58□□□□□ -1.68
CTNND1-204ENST00000361796 TRANK1O15050 2925 aa4.58□□□□□ -1.68
CTNND1-204ENST00000361796 AKAP13Q12802 2813 aa4.57□□□□□ -1.68
CTNND1-204ENST00000361796 A8MUU9 505 aa4.56□□□□□ -1.68
CTNND1-204ENST00000361796 COL6A3P12111 3177 aa4.56□□□□□ -1.68
CTNND1-204ENST00000361796 A0A1B0GVY2 172 aa4.55□□□□□ -1.68
CTNND1-204ENST00000361796 ASB16-AS1Q495Z4 193 aa4.55□□□□□ -1.68
CTNND1-204ENST00000361796 CENPEQ02224 2701 aa4.54□□□□□ -1.68
CTNND1-204ENST00000361796 FRYQ5TBA9 3013 aa4.54□□□□□ -1.68
CTNND1-204ENST00000361796 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
CTNND1-204ENST00000361796 KRTAP13-2Q52LG2 175 aa4.54□□□□□ -1.68
CTNND1-204ENST00000361796 TEX15Q9BXT5 2789 aa4.54□□□□□ -1.68
CTNND1-204ENST00000361796 A6NN06 94 aa4.53□□□□□ -1.68
CTNND1-204ENST00000361796 DMDP11532 3685 aa4.53□□□□□ -1.68
CTNND1-204ENST00000361796 GCN1Q92616 2671 aaKnown RBP4.53□□□□□ -1.68
CTNND1-204ENST00000361796 FLG2Q5D862 2391 aaPredicted RBP4.52□□□□□ -1.69
CTNND1-204ENST00000361796 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
CTNND1-204ENST00000361796 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
CTNND1-204ENST00000361796 NBEAL1Q6ZS30 2694 aa4.52□□□□□ -1.69
CTNND1-204ENST00000361796 NBEAL2Q6ZNJ1 2754 aa4.5□□□□□ -1.69
CTNND1-204ENST00000361796 WDFY3Q8IZQ1 3526 aa4.49□□□□□ -1.69
CTNND1-204ENST00000361796 ASPMQ8IZT6 3477 aa4.49□□□□□ -1.69
CTNND1-204ENST00000361796 P0C880 135 aa4.48□□□□□ -1.69
CTNND1-204ENST00000361796 KALRNO60229 2985 aa4.47□□□□□ -1.69
CTNND1-204ENST00000361796 KRTAP10-8P60410 259 aa4.46□□□□□ -1.69
CTNND1-204ENST00000361796 LAMA1P25391 3075 aa4.46□□□□□ -1.7
CTNND1-204ENST00000361796 TEP1Q99973 2627 aaKnown RBP4.46□□□□□ -1.7
CTNND1-204ENST00000361796 UNC79Q9P2D8 2635 aa4.46□□□□□ -1.7
CTNND1-204ENST00000361796 REV3LO60673 3130 aa4.46□□□□□ -1.7
CTNND1-204ENST00000361796 CFAP47Q6ZTR5 3102 aa4.45□□□□□ -1.7
CTNND1-204ENST00000361796 KRTAP13-1Q8IUC0 172 aa4.45□□□□□ -1.7
CTNND1-204ENST00000361796 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
CTNND1-204ENST00000361796 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
CTNND1-204ENST00000361796 STAB1Q9NY15 2570 aa4.43□□□□□ -1.7
CTNND1-204ENST00000361796 RPS29P62273 56 aaKnown RBP4.42□□□□□ -1.7
CTNND1-204ENST00000361796 DSPP15924 2871 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms