RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 LINC00483Q53H64 154 aa4.45□□□□□ -1.7
SGMS1-201ENST00000361543 C3orf22Q8N5N4 141 aa4.45□□□□□ -1.7
SGMS1-201ENST00000361543 Q9BRP9 147 aa4.45□□□□□ -1.7
SGMS1-201ENST00000361543 TSTD3H0UI37 97 aa4.44□□□□□ -1.7
SGMS1-201ENST00000361543 SMIM11BQ8TCY0 68 aa4.44□□□□□ -1.7
SGMS1-201ENST00000361543 RETNLBQ9BQ08 111 aa4.44□□□□□ -1.7
SGMS1-201ENST00000361543 H0YGX0 51 aa4.43□□□□□ -1.7
SGMS1-201ENST00000361543 CFC1BP0CG36 223 aa4.43□□□□□ -1.7
SGMS1-201ENST00000361543 CFC1P0CG37 223 aa4.43□□□□□ -1.7
SGMS1-201ENST00000361543 Q1RN00 199 aa4.43□□□□□ -1.7
SGMS1-201ENST00000361543 GAGE2AQ6NT46 116 aa4.43□□□□□ -1.7
SGMS1-201ENST00000361543 SPAG11AQ6PDA7 123 aa4.43□□□□□ -1.7
SGMS1-201ENST00000361543 C12orf57Q99622 126 aa4.43□□□□□ -1.7
SGMS1-201ENST00000361543 PRO1854Q9UHT4 67 aa4.43□□□□□ -1.7
SGMS1-201ENST00000361543 M0R143 59 aa4.42□□□□□ -1.7
SGMS1-201ENST00000361543 PRO1933Q9H354 126 aa4.42□□□□□ -1.7
SGMS1-201ENST00000361543 LAMTOR3Q9UHA4 124 aa4.42□□□□□ -1.7
SGMS1-201ENST00000361543 TEX49A0A1B0GTD5 131 aa4.41□□□□□ -1.7
SGMS1-201ENST00000361543 H7C2G1 150 aa4.41□□□□□ -1.7
SGMS1-201ENST00000361543 ERC2-IT1O76042 136 aa4.41□□□□□ -1.7
SGMS1-201ENST00000361543 COX6CP09669 75 aa4.41□□□□□ -1.7
SGMS1-201ENST00000361543 SPRR1BP22528 89 aa4.41□□□□□ -1.7
SGMS1-201ENST00000361543 SSBP3-AS1Q7Z2R9 100 aa4.41□□□□□ -1.7
SGMS1-201ENST00000361543 Q8NBF4 154 aa4.41□□□□□ -1.7
SGMS1-201ENST00000361543 PPDPFLQ8WWR9 84 aa4.41□□□□□ -1.7
SGMS1-201ENST00000361543 A0A1B0GX51 115 aa4.4□□□□□ -1.71
SGMS1-201ENST00000361543 hADV29S1A0JD25 119 aa4.4□□□□□ -1.71
SGMS1-201ENST00000361543 FXYD2P54710 66 aa4.4□□□□□ -1.71
SGMS1-201ENST00000361543 OCIAD2Q56VL3 154 aa4.4□□□□□ -1.71
SGMS1-201ENST00000361543 LINC00575Q6W349 94 aa4.4□□□□□ -1.71
SGMS1-201ENST00000361543 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
SGMS1-201ENST00000361543 IGLV5-48A0A075B6I7 105 aa4.39□□□□□ -1.71
SGMS1-201ENST00000361543 IGLV9-49A0A0B4J1Y8 123 aa4.39□□□□□ -1.71
SGMS1-201ENST00000361543 H3BQ85 93 aa4.39□□□□□ -1.71
SGMS1-201ENST00000361543 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.39□□□□□ -1.71
SGMS1-201ENST00000361543 IGLV7-46A0A075B6I9 117 aa4.38□□□□□ -1.71
SGMS1-201ENST00000361543 F8WEM9 126 aa4.38□□□□□ -1.71
SGMS1-201ENST00000361543 SPINK1P00995 79 aa4.38□□□□□ -1.71
SGMS1-201ENST00000361543 MOBPQ13875 183 aa4.38□□□□□ -1.71
SGMS1-201ENST00000361543 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
SGMS1-201ENST00000361543 C9orf153Q5TBE3 101 aa4.38□□□□□ -1.71
SGMS1-201ENST00000361543 ST20-AS1Q8NBB2 130 aa4.38□□□□□ -1.71
SGMS1-201ENST00000361543 PSMB2P49721 201 aa4.37□□□□□ -1.71
SGMS1-201ENST00000361543 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
SGMS1-201ENST00000361543 DEFB105AQ8NG35 78 aa4.37□□□□□ -1.71
SGMS1-201ENST00000361543 DNAL4O96015 105 aa4.36□□□□□ -1.71
SGMS1-201ENST00000361543 Q6ZQY7 126 aa4.36□□□□□ -1.71
SGMS1-201ENST00000361543 FP248Q71RG6 208 aaPredicted RBP4.36□□□□□ -1.71
SGMS1-201ENST00000361543 LYRM7Q5U5X0 104 aa4.35□□□□□ -1.71
SGMS1-201ENST00000361543 SNHG12Q9BXW3 62 aa4.35□□□□□ -1.71
SGMS1-201ENST00000361543 K7ERJ3 54 aa4.34□□□□□ -1.71
SGMS1-201ENST00000361543 SCGB1C2P0DMR2 95 aa4.34□□□□□ -1.71
SGMS1-201ENST00000361543 CD164Q04900 197 aa4.34□□□□□ -1.71
SGMS1-201ENST00000361543 Q6JHZ5 121 aa4.34□□□□□ -1.71
SGMS1-201ENST00000361543 LIMD2Q9BT23 127 aa4.34□□□□□ -1.71
SGMS1-201ENST00000361543 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.71
SGMS1-201ENST00000361543 A0A0U1RQV1 116 aa4.33□□□□□ -1.72
SGMS1-201ENST00000361543 LINC01547P58512 204 aaPredicted RBP4.33□□□□□ -1.72
SGMS1-201ENST00000361543 Q8N377 158 aa4.33□□□□□ -1.72
SGMS1-201ENST00000361543 IGLV8-61A0A075B6I0 122 aa4.31□□□□□ -1.72
SGMS1-201ENST00000361543 TMEM256-PLSCR3K7ERE1 68 aa4.31□□□□□ -1.72
SGMS1-201ENST00000361543 TRACP01848 142 aa4.31□□□□□ -1.72
SGMS1-201ENST00000361543 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
SGMS1-201ENST00000361543 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
SGMS1-201ENST00000361543 KRTAP3-1Q9BYR8 98 aa4.31□□□□□ -1.72
SGMS1-201ENST00000361543 ORMDL1Q9P0S3 153 aa4.31□□□□□ -1.72
SGMS1-201ENST00000361543 CLEC2BQ92478 149 aa4.3□□□□□ -1.72
SGMS1-201ENST00000361543 FAM218AQ96MZ4 157 aa4.3□□□□□ -1.72
SGMS1-201ENST00000361543 LST1O00453 97 aa4.29□□□□□ -1.72
SGMS1-201ENST00000361543 TCL1BO95988 128 aa4.29□□□□□ -1.72
SGMS1-201ENST00000361543 FABP2P12104 132 aa4.29□□□□□ -1.72
SGMS1-201ENST00000361543 ATXN8Q156A1 80 aa4.29□□□□□ -1.72
SGMS1-201ENST00000361543 BATFQ16520 125 aa4.29□□□□□ -1.72
SGMS1-201ENST00000361543 Q5XG85 94 aa4.29□□□□□ -1.72
SGMS1-201ENST00000361543 TRBV20-1A0A075B6N2 111 aa4.28□□□□□ -1.72
SGMS1-201ENST00000361543 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
SGMS1-201ENST00000361543 NDUFV3P56181 108 aaKnown RBP4.28□□□□□ -1.72
SGMS1-201ENST00000361543 H3BMG7 143 aa4.27□□□□□ -1.73
SGMS1-201ENST00000361543 UBE2V1Q13404 147 aa4.27□□□□□ -1.73
SGMS1-201ENST00000361543 HRCT1Q6UXD1 115 aa4.27□□□□□ -1.73
SGMS1-201ENST00000361543 SS18L2Q9UHA2 77 aa4.27□□□□□ -1.73
SGMS1-201ENST00000361543 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
SGMS1-201ENST00000361543 ASB16-AS1Q495Z4 193 aa4.25□□□□□ -1.73
SGMS1-201ENST00000361543 COL5A1-AS1Q5SY13 56 aa4.25□□□□□ -1.73
SGMS1-201ENST00000361543 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
SGMS1-201ENST00000361543 Q6Q795 121 aa4.25□□□□□ -1.73
SGMS1-201ENST00000361543 IGFL1Q6UW32 110 aa4.25□□□□□ -1.73
SGMS1-201ENST00000361543 TRBV7-7A0A0K0K1E9 115 aa4.24□□□□□ -1.73
SGMS1-201ENST00000361543 H3BUT2 72 aa4.24□□□□□ -1.73
SGMS1-201ENST00000361543 TAX1BP3O14907 124 aa4.24□□□□□ -1.73
SGMS1-201ENST00000361543 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
SGMS1-201ENST00000361543 TEN1Q86WV5 123 aa4.24□□□□□ -1.73
SGMS1-201ENST00000361543 ANKRD29Q8N6D5 301 aa4.24□□□□□ -1.73
SGMS1-201ENST00000361543 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
SGMS1-201ENST00000361543 JMJD7-PLA2G4BH0Y9G9 81 aa4.23□□□□□ -1.73
SGMS1-201ENST00000361543 BAALC-AS2P0C853 105 aa4.23□□□□□ -1.73
SGMS1-201ENST00000361543 DSCR8Q96T75 97 aa4.23□□□□□ -1.73
SGMS1-201ENST00000361543 NAA38Q9BRA0 125 aaKnown RBP4.23□□□□□ -1.73
SGMS1-201ENST00000361543 A0A1W2PPM0 123 aa4.22□□□□□ -1.73
SGMS1-201ENST00000361543 PCP4L1A6NKN8 68 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms