RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 GCN1Q92616 2671 aaKnown RBP8.25□□□□□ -1.09
LDB3-202ENST00000361373 Q8N1X5 172 aa8.25□□□□□ -1.09
LDB3-202ENST00000361373 UBR5O95071 2799 aaPredicted RBP8.23□□□□□ -1.09
LDB3-202ENST00000361373 WDFY4Q6ZS81 3184 aa8.22□□□□□ -1.09
LDB3-202ENST00000361373 MMP24-AS1A0A0U1RRL7 71 aa8.21□□□□□ -1.1
LDB3-202ENST00000361373 A0A0C4DFX4 3053 aa8.21□□□□□ -1.1
LDB3-202ENST00000361373 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
LDB3-202ENST00000361373 ZCCHC13Q8WW36 166 aaKnown RBP8.2□□□□□ -1.1
LDB3-202ENST00000361373 CFAP54Q96N23 3096 aa8.19□□□□□ -1.1
LDB3-202ENST00000361373 Q6ZR54 194 aa8.19□□□□□ -1.1
LDB3-202ENST00000361373 LINC00472Q9H8W2 130 aa8.19□□□□□ -1.1
LDB3-202ENST00000361373 MKI67P46013 3256 aaKnown RBP8.18□□□□□ -1.1
LDB3-202ENST00000361373 NSD1Q96L73 2696 aaPredicted RBP8.17□□□□□ -1.1
LDB3-202ENST00000361373 KRTAP10-1P60331 282 aa8.17□□□□□ -1.1
LDB3-202ENST00000361373 HRES1P13985 223 aa8.15□□□□□ -1.1
LDB3-202ENST00000361373 Q5VSD8 79 aa8.15□□□□□ -1.11
LDB3-202ENST00000361373 LINC00483Q53H64 154 aa8.14□□□□□ -1.11
LDB3-202ENST00000361373 MAP1AP78559 2803 aaPredicted RBP8.13□□□□□ -1.11
LDB3-202ENST00000361373 KRTAP10-2P60368 255 aa8.13□□□□□ -1.11
LDB3-202ENST00000361373 ITPR2Q14571 2701 aa8.12□□□□□ -1.11
LDB3-202ENST00000361373 SEC61BP60468 96 aaKnown RBP8.11□□□□□ -1.11
LDB3-202ENST00000361373 KRTAP21-3Q3LHN1 58 aa8.11□□□□□ -1.11
LDB3-202ENST00000361373 PRUNE2Q8WUY3 3088 aa8.1□□□□□ -1.11
LDB3-202ENST00000361373 SPINT4Q6UDR6 99 aa8.09□□□□□ -1.11
LDB3-202ENST00000361373 CDC42SE1Q9NRR8 79 aa8.09□□□□□ -1.11
LDB3-202ENST00000361373 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
LDB3-202ENST00000361373 FLNCQ14315 2725 aa8.09□□□□□ -1.11
LDB3-202ENST00000361373 CSAG1Q6PB30 78 aa8.08□□□□□ -1.12
LDB3-202ENST00000361373 KRTAP4-16G5E9R7 235 aaPredicted RBP8.07□□□□□ -1.12
LDB3-202ENST00000361373 FP248Q71RG6 208 aaPredicted RBP8.07□□□□□ -1.12
LDB3-202ENST00000361373 Q1T7F1 81 aa8.07□□□□□ -1.12
LDB3-202ENST00000361373 ITPR1Q14643 2758 aa8.07□□□□□ -1.12
LDB3-202ENST00000361373 TRIOO75962 3097 aa8.06□□□□□ -1.12
LDB3-202ENST00000361373 NBEAL2Q6ZNJ1 2754 aa8.05□□□□□ -1.12
LDB3-202ENST00000361373 Q5W150 140 aa8.05□□□□□ -1.12
LDB3-202ENST00000361373 LAMA2P24043 3122 aaKnown RBP8.05□□□□□ -1.12
LDB3-202ENST00000361373 A0A0D9SG42 100 aa8.04□□□□□ -1.12
LDB3-202ENST00000361373 A0A1B0GU33 70 aa8.03□□□□□ -1.12
LDB3-202ENST00000361373 SPINK7P58062 85 aa8.03□□□□□ -1.12
LDB3-202ENST00000361373 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
LDB3-202ENST00000361373 M0R2T5 61 aa8.03□□□□□ -1.12
LDB3-202ENST00000361373 BRCA2P51587 3418 aa8.03□□□□□ -1.12
LDB3-202ENST00000361373 STAB2Q8WWQ8 2551 aa8.02□□□□□ -1.13
LDB3-202ENST00000361373 KMT2BQ9UMN6 2715 aaPredicted RBP8.01□□□□□ -1.13
LDB3-202ENST00000361373 S4R3F8 94 aa7.99□□□□□ -1.13
LDB3-202ENST00000361373 PANO1I0J062 215 aa7.99□□□□□ -1.13
LDB3-202ENST00000361373 OXTP01178 125 aa7.98□□□□□ -1.13
LDB3-202ENST00000361373 Q6ZRN7 208 aaPredicted RBP7.98□□□□□ -1.13
LDB3-202ENST00000361373 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
LDB3-202ENST00000361373 CAMK2N1Q7Z7J9 78 aa7.96□□□□□ -1.14
LDB3-202ENST00000361373 VPS13AQ96RL7 3174 aa7.95□□□□□ -1.14
LDB3-202ENST00000361373 Q75L30 129 aa7.95□□□□□ -1.14
LDB3-202ENST00000361373 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
LDB3-202ENST00000361373 HIVEP1P15822 2718 aa7.94□□□□□ -1.14
LDB3-202ENST00000361373 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
LDB3-202ENST00000361373 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
LDB3-202ENST00000361373 RPS29P62273 56 aaKnown RBP7.93□□□□□ -1.14
LDB3-202ENST00000361373 FRYQ5TBA9 3013 aa7.93□□□□□ -1.14
LDB3-202ENST00000361373 ASB16-AS1Q495Z4 193 aa7.91□□□□□ -1.14
LDB3-202ENST00000361373 LCA10Q71F78 164 aa7.91□□□□□ -1.14
LDB3-202ENST00000361373 A0A087X002 238 aa7.88□□□□□ -1.15
LDB3-202ENST00000361373 UNC80Q8N2C7 3258 aa7.88□□□□□ -1.15
LDB3-202ENST00000361373 XIRP2A4UGR9 3374 aa7.86□□□□□ -1.15
LDB3-202ENST00000361373 ATMQ13315 3056 aa7.86□□□□□ -1.15
LDB3-202ENST00000361373 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
LDB3-202ENST00000361373 TACC2O95359 2948 aa7.84□□□□□ -1.15
LDB3-202ENST00000361373 R4GN34 69 aa7.84□□□□□ -1.15
LDB3-202ENST00000361373 DMBT1Q9UGM3 2413 aaPredicted RBP7.84□□□□□ -1.16
LDB3-202ENST00000361373 COL12A1Q99715 3063 aa7.83□□□□□ -1.16
LDB3-202ENST00000361373 NIPBLQ6KC79 2804 aaeCLIP7.83□□□□□ -1.16
LDB3-202ENST00000361373 TENM4Q6N022 2769 aa7.82□□□□□ -1.16
LDB3-202ENST00000361373 UTP20O75691 2785 aaKnown RBP7.82□□□□□ -1.16
LDB3-202ENST00000361373 FRYLO94915 3013 aa7.82□□□□□ -1.16
LDB3-202ENST00000361373 Q5XG85 94 aa7.81□□□□□ -1.16
LDB3-202ENST00000361373 APCP25054 2843 aa7.79□□□□□ -1.16
LDB3-202ENST00000361373 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
LDB3-202ENST00000361373 KRTAP11-1Q8IUC1 163 aa7.77□□□□□ -1.17
LDB3-202ENST00000361373 KRTAP7-1Q8IUC3 87 aa7.77□□□□□ -1.17
LDB3-202ENST00000361373 CYSTM1Q9H1C7 97 aa7.75□□□□□ -1.17
LDB3-202ENST00000361373 LUZP6Q538Z0 58 aa7.73□□□□□ -1.17
LDB3-202ENST00000361373 CDH23Q9H251 3354 aa7.72□□□□□ -1.17
LDB3-202ENST00000361373 Q5VV11 94 aa7.72□□□□□ -1.17
LDB3-202ENST00000361373 DMXL2Q8TDJ6 3036 aa7.71□□□□□ -1.18
LDB3-202ENST00000361373 RPL37P61927 97 aaKnown RBP7.7□□□□□ -1.18
LDB3-202ENST00000361373 KRTAP13-2Q52LG2 175 aa7.68□□□□□ -1.18
LDB3-202ENST00000361373 ADGRG4Q8IZF6 3080 aa7.68□□□□□ -1.18
LDB3-202ENST00000361373 REV3LO60673 3130 aa7.68□□□□□ -1.18
LDB3-202ENST00000361373 KALRNO60229 2985 aa7.68□□□□□ -1.18
LDB3-202ENST00000361373 LRBAP50851 2863 aa7.67□□□□□ -1.18
LDB3-202ENST00000361373 H1FX-AS1Q4G0G2 97 aa7.66□□□□□ -1.18
LDB3-202ENST00000361373 NOTCH2NLQ7Z3S9 236 aa7.65□□□□□ -1.18
LDB3-202ENST00000361373 M0QZ58 72 aa7.65□□□□□ -1.18
LDB3-202ENST00000361373 ZZEF1O43149 2961 aa7.64□□□□□ -1.19
LDB3-202ENST00000361373 LAMA1P25391 3075 aa7.62□□□□□ -1.19
LDB3-202ENST00000361373 SZT2Q5T011 3432 aa7.61□□□□□ -1.19
LDB3-202ENST00000361373 EYSQ5T1H1 3165 aa7.6□□□□□ -1.19
LDB3-202ENST00000361373 NBEAQ8NFP9 2946 aa7.59□□□□□ -1.19
LDB3-202ENST00000361373 TNRC18O15417 2968 aaPredicted RBP7.59□□□□□ -1.19
LDB3-202ENST00000361373 ADM2Q7Z4H4 148 aa7.58□□□□□ -1.2
LDB3-202ENST00000361373 BOD1L1Q8NFC6 3051 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms