RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 RBM12B-AS1Q9P1G2 102 aa10.2□□□□□ -0.78
CLSTN1-201ENST00000361311 IGLV5-37A0A075B6J1 123 aa10.19□□□□□ -0.78
CLSTN1-201ENST00000361311 A0A1B0GVX0 72 aa10.18□□□□□ -0.78
CLSTN1-201ENST00000361311 TNRC18O15417 2968 aaPredicted RBP10.18□□□□□ -0.78
CLSTN1-201ENST00000361311 IGLV5-52A0A0A0MRZ9 124 aa10.18□□□□□ -0.78
CLSTN1-201ENST00000361311 Q5VV11 94 aa10.18□□□□□ -0.78
CLSTN1-201ENST00000361311 UQCR11O14957 56 aa10.17□□□□□ -0.78
CLSTN1-201ENST00000361311 FLNCQ14315 2725 aa10.17□□□□□ -0.78
CLSTN1-201ENST00000361311 Q75L30 129 aa10.16□□□□□ -0.78
CLSTN1-201ENST00000361311 KRTAP1-3Q8IUG1 177 aa10.15□□□□□ -0.78
CLSTN1-201ENST00000361311 EYSQ5T1H1 3165 aa10.15□□□□□ -0.79
CLSTN1-201ENST00000361311 MDFIQ99750 246 aa10.14□□□□□ -0.79
CLSTN1-201ENST00000361311 IGLV7-46A0A075B6I9 117 aa10.14□□□□□ -0.79
CLSTN1-201ENST00000361311 LINC00313P59037 77 aa10.14□□□□□ -0.79
CLSTN1-201ENST00000361311 ASH1LQ9NR48 2969 aaKnown RBP10.13□□□□□ -0.79
CLSTN1-201ENST00000361311 FAM229AH3BQW9 127 aa10.13□□□□□ -0.79
CLSTN1-201ENST00000361311 PRR26Q8N8Z3 221 aa10.12□□□□□ -0.79
CLSTN1-201ENST00000361311 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
CLSTN1-201ENST00000361311 SPTBN5Q9NRC6 3674 aaKnown RBP10.12□□□□□ -0.79
CLSTN1-201ENST00000361311 MIR22HGQ0VDD5 57 aa10.11□□□□□ -0.79
CLSTN1-201ENST00000361311 CNBPP62633 177 aaKnown RBP10.1□□□□□ -0.79
CLSTN1-201ENST00000361311 SPRR1AP35321 89 aa10.1□□□□□ -0.79
CLSTN1-201ENST00000361311 LOC400499M0QZD8 3231 aa10.09□□□□□ -0.79
CLSTN1-201ENST00000361311 C1orf134Q5TEV5 83 aa10.08□□□□□ -0.8
CLSTN1-201ENST00000361311 KRTAP1-1Q07627 177 aa10.08□□□□□ -0.8
CLSTN1-201ENST00000361311 KRTAP10-11P60412 298 aa10.07□□□□□ -0.8
CLSTN1-201ENST00000361311 SPACA4Q8TDM5 124 aa10.07□□□□□ -0.8
CLSTN1-201ENST00000361311 WDFY3Q8IZQ1 3526 aa10.06□□□□□ -0.8
CLSTN1-201ENST00000361311 UBR5O95071 2799 aaPredicted RBP10.06□□□□□ -0.8
CLSTN1-201ENST00000361311 LINC01558Q9Y6Z2 57 aa10.05□□□□□ -0.8
CLSTN1-201ENST00000361311 NBDYA0A0U1RRE5 68 aa10.05□□□□□ -0.8
CLSTN1-201ENST00000361311 NBEAL1Q6ZS30 2694 aa10.04□□□□□ -0.8
CLSTN1-201ENST00000361311 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
CLSTN1-201ENST00000361311 COL12A1Q99715 3063 aa10.02□□□□□ -0.81
CLSTN1-201ENST00000361311 TNP2Q05952 138 aa10.02□□□□□ -0.81
CLSTN1-201ENST00000361311 ZCCHC13Q8WW36 166 aaKnown RBP10.02□□□□□ -0.81
CLSTN1-201ENST00000361311 MMP24-AS1A0A0U1RRL7 71 aa10.01□□□□□ -0.81
CLSTN1-201ENST00000361311 ANAPC11Q9NYG5 84 aa10□□□□□ -0.81
CLSTN1-201ENST00000361311 RTL8CO15255 209 aa9.99□□□□□ -0.81
CLSTN1-201ENST00000361311 KRTAP26-1Q6PEX3 210 aa9.98□□□□□ -0.81
CLSTN1-201ENST00000361311 DMXL1Q9Y485 3027 aa9.98□□□□□ -0.81
CLSTN1-201ENST00000361311 K7EIL1 84 aa9.97□□□□□ -0.81
CLSTN1-201ENST00000361311 WWC2-AS2Q96NR7 200 aa9.95□□□□□ -0.82
CLSTN1-201ENST00000361311 LINC00472Q9H8W2 130 aa9.95□□□□□ -0.82
CLSTN1-201ENST00000361311 ZNF861PO60384 105 aa9.95□□□□□ -0.82
CLSTN1-201ENST00000361311 SPINK7P58062 85 aa9.94□□□□□ -0.82
CLSTN1-201ENST00000361311 HRES1P13985 223 aa9.93□□□□□ -0.82
CLSTN1-201ENST00000361311 PRAC1Q96KF2 57 aa9.93□□□□□ -0.82
CLSTN1-201ENST00000361311 ITPR2Q14571 2701 aa9.91□□□□□ -0.82
CLSTN1-201ENST00000361311 ZANQ9Y493 2812 aa9.9□□□□□ -0.82
CLSTN1-201ENST00000361311 SSBP3-AS1Q7Z2R9 100 aa9.89□□□□□ -0.83
CLSTN1-201ENST00000361311 Q96NJ1 140 aa9.89□□□□□ -0.83
CLSTN1-201ENST00000361311 KRTAP4-16G5E9R7 235 aaPredicted RBP9.89□□□□□ -0.83
CLSTN1-201ENST00000361311 LINC01554Q52M75 96 aa9.88□□□□□ -0.83
CLSTN1-201ENST00000361311 PSORS1C2Q9UIG4 136 aa9.88□□□□□ -0.83
CLSTN1-201ENST00000361311 LCE6AA0A183 80 aa9.87□□□□□ -0.83
CLSTN1-201ENST00000361311 KRTAP29-1A8MX34 341 aaPredicted RBP9.86□□□□□ -0.83
CLSTN1-201ENST00000361311 HRNRQ86YZ3 2850 aaPredicted RBP9.86□□□□□ -0.83
CLSTN1-201ENST00000361311 SPRR1BP22528 89 aa9.85□□□□□ -0.83
CLSTN1-201ENST00000361311 DCHS1Q96JQ0 3298 aa9.85□□□□□ -0.83
CLSTN1-201ENST00000361311 NSD1Q96L73 2696 aaPredicted RBP9.84□□□□□ -0.83
CLSTN1-201ENST00000361311 UTP20O75691 2785 aaKnown RBP9.81□□□□□ -0.84
CLSTN1-201ENST00000361311 TYMSOSQ8TAI1 123 aa9.8□□□□□ -0.84
CLSTN1-201ENST00000361311 A8MU10 97 aa9.79□□□□□ -0.84
CLSTN1-201ENST00000361311 SPINT4Q6UDR6 99 aa9.79□□□□□ -0.84
CLSTN1-201ENST00000361311 A0A087WTM6 91 aa9.78□□□□□ -0.84
CLSTN1-201ENST00000361311 APCP25054 2843 aa9.77□□□□□ -0.85
CLSTN1-201ENST00000361311 IGLV7-43P04211 117 aa9.75□□□□□ -0.85
CLSTN1-201ENST00000361311 Q8N1X5 172 aa9.74□□□□□ -0.85
CLSTN1-201ENST00000361311 H3BS24 57 aa9.74□□□□□ -0.85
CLSTN1-201ENST00000361311 CELSR2Q9HCU4 2923 aa9.73□□□□□ -0.85
CLSTN1-201ENST00000361311 APLNQ9ULZ1 77 aa9.73□□□□□ -0.85
CLSTN1-201ENST00000361311 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
CLSTN1-201ENST00000361311 FBN2P35556 2912 aa9.72□□□□□ -0.85
CLSTN1-201ENST00000361311 HIVEP1P15822 2718 aa9.71□□□□□ -0.86
CLSTN1-201ENST00000361311 A6NN06 94 aa9.7□□□□□ -0.86
CLSTN1-201ENST00000361311 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
CLSTN1-201ENST00000361311 NF1P21359 2839 aa9.7□□□□□ -0.86
CLSTN1-201ENST00000361311 Q6ZR54 194 aa9.69□□□□□ -0.86
CLSTN1-201ENST00000361311 CSAG1Q6PB30 78 aa9.68□□□□□ -0.86
CLSTN1-201ENST00000361311 Q5W150 140 aa9.65□□□□□ -0.86
CLSTN1-201ENST00000361311 KRTAP1-5Q9BYS1 174 aa9.63□□□□□ -0.87
CLSTN1-201ENST00000361311 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
CLSTN1-201ENST00000361311 ZFHX4Q86UP3 3567 aa9.61□□□□□ -0.87
CLSTN1-201ENST00000361311 NIPBLQ6KC79 2804 aaeCLIP9.59□□□□□ -0.87
CLSTN1-201ENST00000361311 STAB2Q8WWQ8 2551 aa9.59□□□□□ -0.87
CLSTN1-201ENST00000361311 DMAC1Q96GE9 116 aa9.59□□□□□ -0.87
CLSTN1-201ENST00000361311 TENM4Q6N022 2769 aa9.57□□□□□ -0.88
CLSTN1-201ENST00000361311 A0A1B0GU33 70 aa9.57□□□□□ -0.88
CLSTN1-201ENST00000361311 MUC3AQ02505 3323 aa9.56□□□□□ -0.88
CLSTN1-201ENST00000361311 C9orf92A6NGG3 77 aa9.55□□□□□ -0.88
CLSTN1-201ENST00000361311 ASPMQ8IZT6 3477 aa9.55□□□□□ -0.88
CLSTN1-201ENST00000361311 LINC00304Q8N9R0 145 aa9.55□□□□□ -0.88
CLSTN1-201ENST00000361311 CRIPTQ9P021 101 aa9.55□□□□□ -0.88
CLSTN1-201ENST00000361311 DCHS2Q6V1P9 2916 aa9.54□□□□□ -0.88
CLSTN1-201ENST00000361311 MXRA5Q9NR99 2828 aa9.53□□□□□ -0.88
CLSTN1-201ENST00000361311 A0A087X002 238 aa9.52□□□□□ -0.89
CLSTN1-201ENST00000361311 NOTCH2NLQ7Z3S9 236 aa9.52□□□□□ -0.89
CLSTN1-201ENST00000361311 ASB16-AS1Q495Z4 193 aa9.51□□□□□ -0.89
CLSTN1-201ENST00000361311 CSMD1Q96PZ7 3565 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms