RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 UNC79Q9P2D8 2635 aa3□□□□□ -1.93
SCN3A-202ENST00000360093 KRTAP26-1Q6PEX3 210 aa3□□□□□ -1.93
SCN3A-202ENST00000360093 COL6A5A8TX70 2615 aa3□□□□□ -1.93
SCN3A-202ENST00000360093 BAHCC1Q9P281 2608 aa3□□□□□ -1.93
SCN3A-202ENST00000360093 Q6ZSA8 131 aa3□□□□□ -1.93
SCN3A-202ENST00000360093 UNC80Q8N2C7 3258 aa3□□□□□ -1.93
SCN3A-202ENST00000360093 STAB1Q9NY15 2570 aa2.99□□□□□ -1.93
SCN3A-202ENST00000360093 LCE6AA0A183 80 aa2.99□□□□□ -1.93
SCN3A-202ENST00000360093 PRR26Q8N8Z3 221 aa2.99□□□□□ -1.93
SCN3A-202ENST00000360093 SETXQ7Z333 2677 aaKnown RBP2.98□□□□□ -1.93
SCN3A-202ENST00000360093 GCN1Q92616 2671 aaKnown RBP2.98□□□□□ -1.93
SCN3A-202ENST00000360093 CRIPTQ9P021 101 aa2.98□□□□□ -1.93
SCN3A-202ENST00000360093 FRYQ5TBA9 3013 aa2.98□□□□□ -1.93
SCN3A-202ENST00000360093 SZT2Q5T011 3432 aa2.97□□□□□ -1.93
SCN3A-202ENST00000360093 LINC00483Q53H64 154 aa2.97□□□□□ -1.93
SCN3A-202ENST00000360093 KRTAP1-5Q9BYS1 174 aa2.97□□□□□ -1.93
SCN3A-202ENST00000360093 LINC00472Q9H8W2 130 aa2.97□□□□□ -1.93
SCN3A-202ENST00000360093 LAMA1P25391 3075 aa2.97□□□□□ -1.93
SCN3A-202ENST00000360093 NBEAL1Q6ZS30 2694 aa2.97□□□□□ -1.93
SCN3A-202ENST00000360093 KRTAP21-3Q3LHN1 58 aa2.96□□□□□ -1.93
SCN3A-202ENST00000360093 DNAH14Q0VDD8 3507 aa2.96□□□□□ -1.93
SCN3A-202ENST00000360093 Q8NDZ9 215 aa2.96□□□□□ -1.94
SCN3A-202ENST00000360093 ZCCHC13Q8WW36 166 aaKnown RBP2.96□□□□□ -1.94
SCN3A-202ENST00000360093 Q1T7F1 81 aa2.96□□□□□ -1.94
SCN3A-202ENST00000360093 MMP24-AS1A0A0U1RRL7 71 aa2.96□□□□□ -1.94
SCN3A-202ENST00000360093 CELSR3Q9NYQ7 3312 aa2.96□□□□□ -1.94
SCN3A-202ENST00000360093 Q8N1X5 172 aa2.95□□□□□ -1.94
SCN3A-202ENST00000360093 VCANP13611 3396 aa2.95□□□□□ -1.94
SCN3A-202ENST00000360093 Q6ZR54 194 aa2.95□□□□□ -1.94
SCN3A-202ENST00000360093 MAP1AP78559 2803 aaPredicted RBP2.94□□□□□ -1.94
SCN3A-202ENST00000360093 SEC61BP60468 96 aaKnown RBP2.94□□□□□ -1.94
SCN3A-202ENST00000360093 FP248Q71RG6 208 aaPredicted RBP2.94□□□□□ -1.94
SCN3A-202ENST00000360093 REV3LO60673 3130 aa2.94□□□□□ -1.94
SCN3A-202ENST00000360093 CDC42SE1Q9NRR8 79 aa2.94□□□□□ -1.94
SCN3A-202ENST00000360093 FRYLO94915 3013 aa2.94□□□□□ -1.94
SCN3A-202ENST00000360093 HRES1P13985 223 aa2.94□□□□□ -1.94
SCN3A-202ENST00000360093 NSD1Q96L73 2696 aaPredicted RBP2.93□□□□□ -1.94
SCN3A-202ENST00000360093 SPTBN5Q9NRC6 3674 aaKnown RBP2.93□□□□□ -1.94
SCN3A-202ENST00000360093 Q5VSD8 79 aa2.93□□□□□ -1.94
SCN3A-202ENST00000360093 NOTCH1P46531 2555 aa2.93□□□□□ -1.94
SCN3A-202ENST00000360093 KRTAP4-16G5E9R7 235 aaPredicted RBP2.93□□□□□ -1.94
SCN3A-202ENST00000360093 SPINT4Q6UDR6 99 aa2.93□□□□□ -1.94
SCN3A-202ENST00000360093 KRTAP10-1P60331 282 aa2.93□□□□□ -1.94
SCN3A-202ENST00000360093 USP34Q70CQ2 3546 aa2.93□□□□□ -1.94
SCN3A-202ENST00000360093 TNRC18O15417 2968 aaPredicted RBP2.92□□□□□ -1.94
SCN3A-202ENST00000360093 CSAG1Q6PB30 78 aa2.92□□□□□ -1.94
SCN3A-202ENST00000360093 UTP20O75691 2785 aaKnown RBP2.91□□□□□ -1.94
SCN3A-202ENST00000360093 OXTP01178 125 aa2.91□□□□□ -1.94
SCN3A-202ENST00000360093 RPS29P62273 56 aaKnown RBP2.91□□□□□ -1.94
SCN3A-202ENST00000360093 KRTAP10-2P60368 255 aa2.91□□□□□ -1.94
SCN3A-202ENST00000360093 A0A1B0GU33 70 aa2.9□□□□□ -1.94
SCN3A-202ENST00000360093 UBR5O95071 2799 aaPredicted RBP2.9□□□□□ -1.94
SCN3A-202ENST00000360093 NBEAQ8NFP9 2946 aa2.9□□□□□ -1.94
SCN3A-202ENST00000360093 Q5W150 140 aa2.9□□□□□ -1.94
SCN3A-202ENST00000360093 Q75L30 129 aa2.9□□□□□ -1.94
SCN3A-202ENST00000360093 KTN1-AS1Q86SY8 53 aa2.9□□□□□ -1.94
SCN3A-202ENST00000360093 S4R3F8 94 aa2.9□□□□□ -1.94
SCN3A-202ENST00000360093 FLNCQ14315 2725 aa2.9□□□□□ -1.94
SCN3A-202ENST00000360093 ITPR1Q14643 2758 aa2.9□□□□□ -1.95
SCN3A-202ENST00000360093 ASB16-AS1Q495Z4 193 aa2.9□□□□□ -1.95
SCN3A-202ENST00000360093 DMAC1Q96GE9 116 aa2.9□□□□□ -1.95
SCN3A-202ENST00000360093 NBEAL2Q6ZNJ1 2754 aa2.89□□□□□ -1.95
SCN3A-202ENST00000360093 SPINK7P58062 85 aa2.89□□□□□ -1.95
SCN3A-202ENST00000360093 COL6A3P12111 3177 aa2.89□□□□□ -1.95
SCN3A-202ENST00000360093 DMXL2Q8TDJ6 3036 aa2.89□□□□□ -1.95
SCN3A-202ENST00000360093 LRBAP50851 2863 aa2.89□□□□□ -1.95
SCN3A-202ENST00000360093 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
SCN3A-202ENST00000360093 LINC01558Q9Y6Z2 57 aa2.89□□□□□ -1.95
SCN3A-202ENST00000360093 M0R2T5 61 aa2.88□□□□□ -1.95
SCN3A-202ENST00000360093 FLG2Q5D862 2391 aaPredicted RBP2.88□□□□□ -1.95
SCN3A-202ENST00000360093 ADGRG4Q8IZF6 3080 aa2.88□□□□□ -1.95
SCN3A-202ENST00000360093 KALRNO60229 2985 aa2.88□□□□□ -1.95
SCN3A-202ENST00000360093 COL12A1Q99715 3063 aa2.88□□□□□ -1.95
SCN3A-202ENST00000360093 A0A0D9SG42 100 aa2.88□□□□□ -1.95
SCN3A-202ENST00000360093 Q6ZRN7 208 aaPredicted RBP2.88□□□□□ -1.95
SCN3A-202ENST00000360093 LCA10Q71F78 164 aa2.87□□□□□ -1.95
SCN3A-202ENST00000360093 BOD1L1Q8NFC6 3051 aa2.87□□□□□ -1.95
SCN3A-202ENST00000360093 ATMQ13315 3056 aa2.87□□□□□ -1.95
SCN3A-202ENST00000360093 Q8N9P0 234 aaPredicted RBP2.87□□□□□ -1.95
SCN3A-202ENST00000360093 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
SCN3A-202ENST00000360093 STAB2Q8WWQ8 2551 aa2.86□□□□□ -1.95
SCN3A-202ENST00000360093 Q5XG85 94 aa2.86□□□□□ -1.95
SCN3A-202ENST00000360093 APCP25054 2843 aa2.85□□□□□ -1.95
SCN3A-202ENST00000360093 PANO1I0J062 215 aa2.85□□□□□ -1.95
SCN3A-202ENST00000360093 HIVEP1P15822 2718 aa2.84□□□□□ -1.95
SCN3A-202ENST00000360093 HRNRQ86YZ3 2850 aaPredicted RBP2.84□□□□□ -1.96
SCN3A-202ENST00000360093 A0A087X002 238 aa2.84□□□□□ -1.96
SCN3A-202ENST00000360093 KRTAP29-1A8MX34 341 aaPredicted RBP2.84□□□□□ -1.96
SCN3A-202ENST00000360093 R4GN34 69 aa2.83□□□□□ -1.96
SCN3A-202ENST00000360093 ZZEF1O43149 2961 aa2.82□□□□□ -1.96
SCN3A-202ENST00000360093 EYSQ5T1H1 3165 aa2.82□□□□□ -1.96
SCN3A-202ENST00000360093 LUZP6Q538Z0 58 aa2.81□□□□□ -1.96
SCN3A-202ENST00000360093 KRTAP13-1Q8IUC0 172 aa2.81□□□□□ -1.96
SCN3A-202ENST00000360093 DMXL1Q9Y485 3027 aa2.81□□□□□ -1.96
SCN3A-202ENST00000360093 TACC2O95359 2948 aa2.81□□□□□ -1.96
SCN3A-202ENST00000360093 DMBT1Q9UGM3 2413 aaPredicted RBP2.8□□□□□ -1.96
SCN3A-202ENST00000360093 NIPBLQ6KC79 2804 aaeCLIP2.8□□□□□ -1.96
SCN3A-202ENST00000360093 Q5VV11 94 aa2.79□□□□□ -1.96
SCN3A-202ENST00000360093 FREM2Q5SZK8 3169 aa2.79□□□□□ -1.96
SCN3A-202ENST00000360093 KRTAP7-1Q8IUC3 87 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms