RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 RELNP78509 3460 aa3.57□□□□□ -1.84
BRCA1-203ENST00000357654 PRR34Q9NV39 138 aa3.57□□□□□ -1.84
BRCA1-203ENST00000357654 ZNF462Q96JM2 2506 aa3.56□□□□□ -1.84
BRCA1-203ENST00000357654 ASPMQ8IZT6 3477 aa3.56□□□□□ -1.84
BRCA1-203ENST00000357654 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
BRCA1-203ENST00000357654 ACANP16112 2415 aa3.56□□□□□ -1.84
BRCA1-203ENST00000357654 C5orf42Q9H799 3197 aa3.56□□□□□ -1.84
BRCA1-203ENST00000357654 WDFY4Q6ZS81 3184 aa3.56□□□□□ -1.84
BRCA1-203ENST00000357654 P0C880 135 aa3.56□□□□□ -1.84
BRCA1-203ENST00000357654 CFAP47Q6ZTR5 3102 aa3.55□□□□□ -1.84
BRCA1-203ENST00000357654 FP248Q71RG6 208 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-203ENST00000357654 LAMA1P25391 3075 aa3.55□□□□□ -1.84
BRCA1-203ENST00000357654 H3BS24 57 aa3.55□□□□□ -1.84
BRCA1-203ENST00000357654 KRTAP10-1P60331 282 aa3.55□□□□□ -1.84
BRCA1-203ENST00000357654 KRTAP10-2P60368 255 aa3.54□□□□□ -1.84
BRCA1-203ENST00000357654 FAM229BQ4G0N7 80 aa3.53□□□□□ -1.84
BRCA1-203ENST00000357654 Q8NDZ9 215 aa3.53□□□□□ -1.84
BRCA1-203ENST00000357654 SPTBN4Q9H254 2564 aa3.53□□□□□ -1.84
BRCA1-203ENST00000357654 EIF4EBP3O60516 100 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-203ENST00000357654 RPL37P61927 97 aaKnown RBP3.53□□□□□ -1.84
BRCA1-203ENST00000357654 Q5W150 140 aa3.52□□□□□ -1.85
BRCA1-203ENST00000357654 CELSR3Q9NYQ7 3312 aa3.51□□□□□ -1.85
BRCA1-203ENST00000357654 FRYQ5TBA9 3013 aa3.51□□□□□ -1.85
BRCA1-203ENST00000357654 A0A1B0GVY2 172 aa3.51□□□□□ -1.85
BRCA1-203ENST00000357654 PLAC8Q9NZF1 115 aa3.51□□□□□ -1.85
BRCA1-203ENST00000357654 SPANXA2-OT1Q8N9U9 137 aa3.51□□□□□ -1.85
BRCA1-203ENST00000357654 ZFYVE26Q68DK2 2539 aa3.5□□□□□ -1.85
BRCA1-203ENST00000357654 SPRR1BP22528 89 aa3.5□□□□□ -1.85
BRCA1-203ENST00000357654 C10orf95Q9H7T3 257 aa3.5□□□□□ -1.85
BRCA1-203ENST00000357654 COL6A3P12111 3177 aa3.5□□□□□ -1.85
BRCA1-203ENST00000357654 PIEZO2Q9H5I5 2752 aa3.49□□□□□ -1.85
BRCA1-203ENST00000357654 PRO0461Q9UI25 63 aa3.48□□□□□ -1.85
BRCA1-203ENST00000357654 TLN2Q9Y4G6 2542 aa3.48□□□□□ -1.85
BRCA1-203ENST00000357654 A8MUU9 505 aa3.48□□□□□ -1.85
BRCA1-203ENST00000357654 IGF2RP11717 2491 aa3.48□□□□□ -1.85
BRCA1-203ENST00000357654 VPS13AQ96RL7 3174 aa3.48□□□□□ -1.85
BRCA1-203ENST00000357654 CR1P17927 2039 aa3.46□□□□□ -1.86
BRCA1-203ENST00000357654 ANKRD11Q6UB99 2663 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-203ENST00000357654 KRTAP10-8P60410 259 aa3.46□□□□□ -1.86
BRCA1-203ENST00000357654 CEP295Q9C0D2 2601 aa3.46□□□□□ -1.86
BRCA1-203ENST00000357654 MMP24-AS1A0A0U1RRL7 71 aa3.44□□□□□ -1.86
BRCA1-203ENST00000357654 FREM2Q5SZK8 3169 aa3.44□□□□□ -1.86
BRCA1-203ENST00000357654 ABCA12Q86UK0 2595 aa3.44□□□□□ -1.86
BRCA1-203ENST00000357654 KRTAP1-3Q8IUG1 177 aa3.44□□□□□ -1.86
BRCA1-203ENST00000357654 Q6ZR54 194 aa3.43□□□□□ -1.86
BRCA1-203ENST00000357654 ITPR1Q14643 2758 aa3.43□□□□□ -1.86
BRCA1-203ENST00000357654 DCHS1Q96JQ0 3298 aa3.43□□□□□ -1.86
BRCA1-203ENST00000357654 Q75L30 129 aa3.42□□□□□ -1.86
BRCA1-203ENST00000357654 ZFHX3Q15911 3703 aa3.42□□□□□ -1.86
BRCA1-203ENST00000357654 LINC01558Q9Y6Z2 57 aa3.42□□□□□ -1.86
BRCA1-203ENST00000357654 KRTAP1-1Q07627 177 aa3.42□□□□□ -1.86
BRCA1-203ENST00000357654 A0A096LNT2 108 aa3.42□□□□□ -1.86
BRCA1-203ENST00000357654 KALRNO60229 2985 aa3.41□□□□□ -1.86
BRCA1-203ENST00000357654 AKAP9Q99996 3911 aa3.41□□□□□ -1.86
BRCA1-203ENST00000357654 TNP1P09430 55 aa3.41□□□□□ -1.86
BRCA1-203ENST00000357654 USP9XQ93008 2570 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-203ENST00000357654 NBPF19A0A087WUL8 3843 aa3.4□□□□□ -1.87
BRCA1-203ENST00000357654 LAMA5O15230 3695 aa3.4□□□□□ -1.87
BRCA1-203ENST00000357654 SMG1Q96Q15 3661 aaKnown RBP3.4□□□□□ -1.87
BRCA1-203ENST00000357654 PANO1I0J062 215 aa3.4□□□□□ -1.87
BRCA1-203ENST00000357654 A8MU10 97 aa3.39□□□□□ -1.87
BRCA1-203ENST00000357654 WDR87Q6ZQQ6 2873 aa3.39□□□□□ -1.87
BRCA1-203ENST00000357654 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
BRCA1-203ENST00000357654 KRTAP1-5Q9BYS1 174 aa3.38□□□□□ -1.87
BRCA1-203ENST00000357654 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
BRCA1-203ENST00000357654 DMXL1Q9Y485 3027 aa3.37□□□□□ -1.87
BRCA1-203ENST00000357654 USP9YO00507 2555 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-203ENST00000357654 FLG2Q5D862 2391 aaPredicted RBP3.36□□□□□ -1.87
BRCA1-203ENST00000357654 ZZEF1O43149 2961 aa3.36□□□□□ -1.87
BRCA1-203ENST00000357654 A0A087X002 238 aa3.36□□□□□ -1.87
BRCA1-203ENST00000357654 KRTAP10-10P60014 251 aa3.36□□□□□ -1.87
BRCA1-203ENST00000357654 VPS13CQ709C8 3753 aa3.36□□□□□ -1.87
BRCA1-203ENST00000357654 ATMQ13315 3056 aa3.34□□□□□ -1.87
BRCA1-203ENST00000357654 KRTAP26-1Q6PEX3 210 aa3.34□□□□□ -1.87
BRCA1-203ENST00000357654 DCHS2Q6V1P9 2916 aa3.34□□□□□ -1.88
BRCA1-203ENST00000357654 ANK3Q12955 4377 aaKnown RBP3.34□□□□□ -1.88
BRCA1-203ENST00000357654 ANKRD17O75179 2603 aaKnown RBP3.33□□□□□ -1.88
BRCA1-203ENST00000357654 DMXL2Q8TDJ6 3036 aa3.32□□□□□ -1.88
BRCA1-203ENST00000357654 LOC400499M0QZD8 3231 aa3.32□□□□□ -1.88
BRCA1-203ENST00000357654 Q5VV11 94 aa3.32□□□□□ -1.88
BRCA1-203ENST00000357654 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
BRCA1-203ENST00000357654 LINC00472Q9H8W2 130 aa3.31□□□□□ -1.88
BRCA1-203ENST00000357654 ZNF292O60281 2723 aa3.3□□□□□ -1.88
BRCA1-203ENST00000357654 POLQO75417 2590 aa3.29□□□□□ -1.88
BRCA1-203ENST00000357654 MAST4O15021 2626 aa3.29□□□□□ -1.88
BRCA1-203ENST00000357654 NBEAQ8NFP9 2946 aa3.28□□□□□ -1.88
BRCA1-203ENST00000357654 A0A0C4DFX4 3053 aa3.28□□□□□ -1.88
BRCA1-203ENST00000357654 DNAH3Q8TD57 4116 aa3.27□□□□□ -1.89
BRCA1-203ENST00000357654 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
BRCA1-203ENST00000357654 UNC79Q9P2D8 2635 aa3.27□□□□□ -1.89
BRCA1-203ENST00000357654 BOD1L1Q8NFC6 3051 aa3.26□□□□□ -1.89
BRCA1-203ENST00000357654 HRNRQ86YZ3 2850 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-203ENST00000357654 SETXQ7Z333 2677 aaKnown RBP3.26□□□□□ -1.89
BRCA1-203ENST00000357654 NOTCH2NLQ7Z3S9 236 aa3.26□□□□□ -1.89
BRCA1-203ENST00000357654 SVEP1Q4LDE5 3571 aa3.25□□□□□ -1.89
BRCA1-203ENST00000357654 SETD2Q9BYW2 2564 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-203ENST00000357654 ANK2Q01484 3957 aa3.25□□□□□ -1.89
BRCA1-203ENST00000357654 DNAH1Q9P2D7 4330 aa3.25□□□□□ -1.89
BRCA1-203ENST00000357654 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
BRCA1-203ENST00000357654 AKAP13Q12802 2813 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms