RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 C9orf163Q8N9P6 203 aa7.62□□□□□ -1.19
SMARCAL1-201ENST00000357276 LINC00208Q96KT6 92 aa7.62□□□□□ -1.19
SMARCAL1-201ENST00000357276 FLNBO75369 2602 aaKnown RBP7.61□□□□□ -1.19
SMARCAL1-201ENST00000357276 CMYA5Q8N3K9 4069 aa7.61□□□□□ -1.19
SMARCAL1-201ENST00000357276 DEFB116Q30KQ4 102 aa7.61□□□□□ -1.19
SMARCAL1-201ENST00000357276 LIMD2Q9BT23 127 aa7.61□□□□□ -1.19
SMARCAL1-201ENST00000357276 RETNQ9HD89 108 aa7.61□□□□□ -1.19
SMARCAL1-201ENST00000357276 TRRAPQ9Y4A5 3859 aa7.6□□□□□ -1.19
SMARCAL1-201ENST00000357276 CASC10Q5T4H9 136 aa7.6□□□□□ -1.19
SMARCAL1-201ENST00000357276 A0A087WSZ3 146 aa7.59□□□□□ -1.19
SMARCAL1-201ENST00000357276 H0Y9P7 68 aa7.59□□□□□ -1.19
SMARCAL1-201ENST00000357276 CNBPP62633 177 aaKnown RBP7.59□□□□□ -1.19
SMARCAL1-201ENST00000357276 DNAH3Q8TD57 4116 aa7.59□□□□□ -1.19
SMARCAL1-201ENST00000357276 UBE2AP49459 152 aa7.58□□□□□ -1.2
SMARCAL1-201ENST00000357276 RPL37AP61513 92 aaKnown RBP7.58□□□□□ -1.2
SMARCAL1-201ENST00000357276 C16orf90A8MZG2 172 aa7.57□□□□□ -1.2
SMARCAL1-201ENST00000357276 KRTAP10-11P60412 298 aa7.57□□□□□ -1.2
SMARCAL1-201ENST00000357276 LOC101927531A0A1B0GV80 90 aa7.56□□□□□ -1.2
SMARCAL1-201ENST00000357276 CASC2Q6XLA1 102 aa7.56□□□□□ -1.2
SMARCAL1-201ENST00000357276 CD164Q04900 197 aa7.56□□□□□ -1.2
SMARCAL1-201ENST00000357276 ANK2Q01484 3957 aa7.56□□□□□ -1.2
SMARCAL1-201ENST00000357276 LINC00472Q9H8W2 130 aa7.56□□□□□ -1.2
SMARCAL1-201ENST00000357276 Q75L30 129 aa7.55□□□□□ -1.2
SMARCAL1-201ENST00000357276 ATRQ13535 2644 aa7.55□□□□□ -1.2
SMARCAL1-201ENST00000357276 DEFB131BA0A096LNP1 70 aa7.55□□□□□ -1.2
SMARCAL1-201ENST00000357276 A8MWP4 228 aa7.54□□□□□ -1.2
SMARCAL1-201ENST00000357276 PRB2P02812 416 aaPredicted RBP7.54□□□□□ -1.2
SMARCAL1-201ENST00000357276 OXLD1Q5BKU9 147 aa7.54□□□□□ -1.2
SMARCAL1-201ENST00000357276 CHKB-CPT1BH3BT56 60 aa7.53□□□□□ -1.2
SMARCAL1-201ENST00000357276 SPRR1BP22528 89 aa7.53□□□□□ -1.2
SMARCAL1-201ENST00000357276 LCA10Q71F78 164 aa7.53□□□□□ -1.2
SMARCAL1-201ENST00000357276 IGLV7-46A0A075B6I9 117 aa7.53□□□□□ -1.2
SMARCAL1-201ENST00000357276 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
SMARCAL1-201ENST00000357276 PRLHP81277 87 aa7.51□□□□□ -1.21
SMARCAL1-201ENST00000357276 ATP11AUNQ6ZP68 121 aa7.51□□□□□ -1.21
SMARCAL1-201ENST00000357276 KTN1-AS1Q86SY8 53 aa7.51□□□□□ -1.21
SMARCAL1-201ENST00000357276 TENM3Q9P273 2699 aa7.5□□□□□ -1.21
SMARCAL1-201ENST00000357276 FBN1P35555 2871 aaKnown RBP7.5□□□□□ -1.21
SMARCAL1-201ENST00000357276 COA5Q86WW8 74 aa7.5□□□□□ -1.21
SMARCAL1-201ENST00000357276 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
SMARCAL1-201ENST00000357276 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
SMARCAL1-201ENST00000357276 C11orf45Q8TAV5 145 aa7.49□□□□□ -1.21
SMARCAL1-201ENST00000357276 ASB16-AS1Q495Z4 193 aa7.49□□□□□ -1.21
SMARCAL1-201ENST00000357276 A6NN06 94 aa7.47□□□□□ -1.21
SMARCAL1-201ENST00000357276 H0Y9J4 135 aa7.47□□□□□ -1.21
SMARCAL1-201ENST00000357276 A0A096LNI7 61 aa7.47□□□□□ -1.21
SMARCAL1-201ENST00000357276 PHF5AQ7RTV0 110 aaKnown RBP7.46□□□□□ -1.22
SMARCAL1-201ENST00000357276 CDC42SE1Q9NRR8 79 aa7.45□□□□□ -1.22
SMARCAL1-201ENST00000357276 TENM2Q9NT68 2774 aa7.45□□□□□ -1.22
SMARCAL1-201ENST00000357276 LINC01558Q9Y6Z2 57 aa7.44□□□□□ -1.22
SMARCAL1-201ENST00000357276 KRTAP11-1Q8IUC1 163 aa7.44□□□□□ -1.22
SMARCAL1-201ENST00000357276 Q6ZR54 194 aa7.43□□□□□ -1.22
SMARCAL1-201ENST00000357276 MDFIQ99750 246 aa7.42□□□□□ -1.22
SMARCAL1-201ENST00000357276 MAST4O15021 2626 aa7.42□□□□□ -1.22
SMARCAL1-201ENST00000357276 A6NED7 52 aa7.42□□□□□ -1.22
SMARCAL1-201ENST00000357276 Q96NJ1 140 aa7.42□□□□□ -1.22
SMARCAL1-201ENST00000357276 NDUFS5O43920 106 aa7.41□□□□□ -1.22
SMARCAL1-201ENST00000357276 LYSTQ99698 3801 aa7.41□□□□□ -1.22
SMARCAL1-201ENST00000357276 RBM12B-AS1Q9P1G2 102 aa7.41□□□□□ -1.22
SMARCAL1-201ENST00000357276 TP53AIP1Q9HCN2 124 aa7.41□□□□□ -1.22
SMARCAL1-201ENST00000357276 K7EIL1 84 aa7.4□□□□□ -1.22
SMARCAL1-201ENST00000357276 SPTSSBQ8NFR3 76 aa7.4□□□□□ -1.23
SMARCAL1-201ENST00000357276 STAB1Q9NY15 2570 aa7.4□□□□□ -1.23
SMARCAL1-201ENST00000357276 SRRM2Q9UQ35 2752 aaKnown RBP7.39□□□□□ -1.23
SMARCAL1-201ENST00000357276 DNAH10Q8IVF4 4471 aa7.39□□□□□ -1.23
SMARCAL1-201ENST00000357276 IGKV2-24A0A0C4DH68 120 aa7.38□□□□□ -1.23
SMARCAL1-201ENST00000357276 MOBPQ13875 183 aa7.38□□□□□ -1.23
SMARCAL1-201ENST00000357276 KRTAP21-3Q3LHN1 58 aa7.36□□□□□ -1.23
SMARCAL1-201ENST00000357276 KRTAP13-1Q8IUC0 172 aa7.36□□□□□ -1.23
SMARCAL1-201ENST00000357276 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
SMARCAL1-201ENST00000357276 HRES1P13985 223 aa7.34□□□□□ -1.23
SMARCAL1-201ENST00000357276 SPAG11AQ6PDA7 123 aa7.34□□□□□ -1.23
SMARCAL1-201ENST00000357276 KRTAP1-5Q9BYS1 174 aa7.34□□□□□ -1.23
SMARCAL1-201ENST00000357276 COL6A5A8TX70 2615 aa7.34□□□□□ -1.23
SMARCAL1-201ENST00000357276 C8orf17Q9NRJ1 99 aa7.33□□□□□ -1.24
SMARCAL1-201ENST00000357276 DNAH9Q9NYC9 4486 aa7.32□□□□□ -1.24
SMARCAL1-201ENST00000357276 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
SMARCAL1-201ENST00000357276 SPINK7P58062 85 aa7.32□□□□□ -1.24
SMARCAL1-201ENST00000357276 CHTF8P0CG12 524 aa7.31□□□□□ -1.24
SMARCAL1-201ENST00000357276 CSMD3Q7Z407 3707 aa7.3□□□□□ -1.24
SMARCAL1-201ENST00000357276 A0A1B0GVX0 72 aa7.28□□□□□ -1.24
SMARCAL1-201ENST00000357276 ALMS1Q8TCU4 4167 aa7.28□□□□□ -1.24
SMARCAL1-201ENST00000357276 HUWE1Q7Z6Z7 4374 aaKnown RBP7.28□□□□□ -1.24
SMARCAL1-201ENST00000357276 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
SMARCAL1-201ENST00000357276 MRPL34Q9BQ48 92 aaKnown RBP7.26□□□□□ -1.25
SMARCAL1-201ENST00000357276 KRTAP13-3Q3SY46 172 aa7.25□□□□□ -1.25
SMARCAL1-201ENST00000357276 C14orf177Q52M58 125 aa7.25□□□□□ -1.25
SMARCAL1-201ENST00000357276 IGHV6-1A0A0B4J1U7 121 aa7.22□□□□□ -1.25
SMARCAL1-201ENST00000357276 A0A087X002 238 aa7.21□□□□□ -1.25
SMARCAL1-201ENST00000357276 PANO1I0J062 215 aa7.21□□□□□ -1.25
SMARCAL1-201ENST00000357276 NOTCH2NLQ7Z3S9 236 aa7.21□□□□□ -1.25
SMARCAL1-201ENST00000357276 DYNC2H1Q8NCM8 4307 aaKnown RBP7.21□□□□□ -1.26
SMARCAL1-201ENST00000357276 IGLV9-49A0A0B4J1Y8 123 aa7.21□□□□□ -1.26
SMARCAL1-201ENST00000357276 WWC2-AS2Q96NR7 200 aa7.19□□□□□ -1.26
SMARCAL1-201ENST00000357276 NBEAL1Q6ZS30 2694 aa7.19□□□□□ -1.26
SMARCAL1-201ENST00000357276 PRR26Q8N8Z3 221 aa7.19□□□□□ -1.26
SMARCAL1-201ENST00000357276 Q5W150 140 aa7.18□□□□□ -1.26
SMARCAL1-201ENST00000357276 NOTCH1P46531 2555 aa7.17□□□□□ -1.26
SMARCAL1-201ENST00000357276 DNAH7Q8WXX0 4024 aa7.16□□□□□ -1.26
SMARCAL1-201ENST00000357276 SPACA4Q8TDM5 124 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms