RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 NOTCH1P46531 2555 aa7.13□□□□□ -1.27
FN1-204ENST00000356005 STAB2Q8WWQ8 2551 aa7.13□□□□□ -1.27
FN1-204ENST00000356005 PRR26Q8N8Z3 221 aa7.1□□□□□ -1.27
FN1-204ENST00000356005 SPINT4Q6UDR6 99 aa7.09□□□□□ -1.27
FN1-204ENST00000356005 CELSR3Q9NYQ7 3312 aa7.09□□□□□ -1.27
FN1-204ENST00000356005 IGLV5-48A0A075B6I7 105 aa7.09□□□□□ -1.27
FN1-204ENST00000356005 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
FN1-204ENST00000356005 NSD1Q96L73 2696 aaPredicted RBP7.09□□□□□ -1.27
FN1-204ENST00000356005 HRES1P13985 223 aa7.08□□□□□ -1.28
FN1-204ENST00000356005 MIR22HGQ0VDD5 57 aa7.08□□□□□ -1.28
FN1-204ENST00000356005 Q5VSD8 79 aa7.07□□□□□ -1.28
FN1-204ENST00000356005 SPANXA2-OT1Q8N9U9 137 aa7.07□□□□□ -1.28
FN1-204ENST00000356005 OXTP01178 125 aa7.07□□□□□ -1.28
FN1-204ENST00000356005 LINC01554Q52M75 96 aa7.07□□□□□ -1.28
FN1-204ENST00000356005 FAM104AQ969W3 186 aa7.06□□□□□ -1.28
FN1-204ENST00000356005 CDH23Q9H251 3354 aa7.06□□□□□ -1.28
FN1-204ENST00000356005 FRYQ5TBA9 3013 aa7.06□□□□□ -1.28
FN1-204ENST00000356005 PRO0628Q9UI54 55 aa7.05□□□□□ -1.28
FN1-204ENST00000356005 KLKP1Q107X0 134 aa7.03□□□□□ -1.28
FN1-204ENST00000356005 KRTAP21-3Q3LHN1 58 aa7.03□□□□□ -1.28
FN1-204ENST00000356005 UTP20O75691 2785 aaKnown RBP7.01□□□□□ -1.29
FN1-204ENST00000356005 APCP25054 2843 aa7.01□□□□□ -1.29
FN1-204ENST00000356005 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
FN1-204ENST00000356005 A0A1W2PNM2 257 aa7□□□□□ -1.29
FN1-204ENST00000356005 Q8N1X5 172 aa7□□□□□ -1.29
FN1-204ENST00000356005 USP34Q70CQ2 3546 aa7□□□□□ -1.29
FN1-204ENST00000356005 A0A0G2JQZ4 141 aa7□□□□□ -1.29
FN1-204ENST00000356005 CDC42SE1Q9NRR8 79 aa6.99□□□□□ -1.29
FN1-204ENST00000356005 CSAG1Q6PB30 78 aa6.99□□□□□ -1.29
FN1-204ENST00000356005 CAMK2N1Q7Z7J9 78 aa6.99□□□□□ -1.29
FN1-204ENST00000356005 LAMA1P25391 3075 aa6.98□□□□□ -1.29
FN1-204ENST00000356005 FP248Q71RG6 208 aaPredicted RBP6.97□□□□□ -1.29
FN1-204ENST00000356005 S4R3F8 94 aa6.96□□□□□ -1.29
FN1-204ENST00000356005 UBR5O95071 2799 aaPredicted RBP6.96□□□□□ -1.3
FN1-204ENST00000356005 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
FN1-204ENST00000356005 CRYBG3Q68DQ2 2970 aa6.95□□□□□ -1.3
FN1-204ENST00000356005 A0A0D9SG42 100 aa6.94□□□□□ -1.3
FN1-204ENST00000356005 LINC00483Q53H64 154 aa6.93□□□□□ -1.3
FN1-204ENST00000356005 NBEAL2Q6ZNJ1 2754 aa6.92□□□□□ -1.3
FN1-204ENST00000356005 LRBAP50851 2863 aa6.92□□□□□ -1.3
FN1-204ENST00000356005 SPRR1AP35321 89 aa6.91□□□□□ -1.3
FN1-204ENST00000356005 UNC80Q8N2C7 3258 aa6.91□□□□□ -1.3
FN1-204ENST00000356005 DNAH14Q0VDD8 3507 aa6.91□□□□□ -1.3
FN1-204ENST00000356005 C4orf26Q17RF5 130 aa6.9□□□□□ -1.3
FN1-204ENST00000356005 ITPR1Q14643 2758 aa6.88□□□□□ -1.31
FN1-204ENST00000356005 LUZP6Q538Z0 58 aa6.88□□□□□ -1.31
FN1-204ENST00000356005 KALRNO60229 2985 aa6.87□□□□□ -1.31
FN1-204ENST00000356005 KRTAP10-1P60331 282 aa6.87□□□□□ -1.31
FN1-204ENST00000356005 SPRR1BP22528 89 aa6.87□□□□□ -1.31
FN1-204ENST00000356005 COL6A3P12111 3177 aa6.86□□□□□ -1.31
FN1-204ENST00000356005 SZT2Q5T011 3432 aa6.85□□□□□ -1.31
FN1-204ENST00000356005 REV3LO60673 3130 aa6.85□□□□□ -1.31
FN1-204ENST00000356005 A0A1B0GU33 70 aa6.85□□□□□ -1.31
FN1-204ENST00000356005 H7BZZ5 65 aa6.84□□□□□ -1.31
FN1-204ENST00000356005 FLNCQ14315 2725 aa6.84□□□□□ -1.31
FN1-204ENST00000356005 KRTAP10-2P60368 255 aa6.83□□□□□ -1.32
FN1-204ENST00000356005 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
FN1-204ENST00000356005 R4GN34 69 aa6.83□□□□□ -1.32
FN1-204ENST00000356005 TNRC18O15417 2968 aaPredicted RBP6.82□□□□□ -1.32
FN1-204ENST00000356005 KRTAP1-5Q9BYS1 174 aa6.82□□□□□ -1.32
FN1-204ENST00000356005 DMXL2Q8TDJ6 3036 aa6.82□□□□□ -1.32
FN1-204ENST00000356005 SPINK7P58062 85 aa6.81□□□□□ -1.32
FN1-204ENST00000356005 OCR1Q9BZK8 76 aa6.81□□□□□ -1.32
FN1-204ENST00000356005 Q6ZR54 194 aa6.81□□□□□ -1.32
FN1-204ENST00000356005 BOD1L1Q8NFC6 3051 aa6.77□□□□□ -1.33
FN1-204ENST00000356005 NBEAQ8NFP9 2946 aa6.76□□□□□ -1.33
FN1-204ENST00000356005 Q1T7F1 81 aa6.76□□□□□ -1.33
FN1-204ENST00000356005 ZZEF1O43149 2961 aa6.76□□□□□ -1.33
FN1-204ENST00000356005 VCANP13611 3396 aa6.76□□□□□ -1.33
FN1-204ENST00000356005 ASH1LQ9NR48 2969 aaKnown RBP6.76□□□□□ -1.33
FN1-204ENST00000356005 COL12A1Q99715 3063 aa6.76□□□□□ -1.33
FN1-204ENST00000356005 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
FN1-204ENST00000356005 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
FN1-204ENST00000356005 HIVEP1P15822 2718 aa6.75□□□□□ -1.33
FN1-204ENST00000356005 RPS29P62273 56 aaKnown RBP6.75□□□□□ -1.33
FN1-204ENST00000356005 PLAC4Q8WY50 150 aa6.74□□□□□ -1.33
FN1-204ENST00000356005 KRTAP26-1Q6PEX3 210 aa6.74□□□□□ -1.33
FN1-204ENST00000356005 Q5W150 140 aa6.73□□□□□ -1.33
FN1-204ENST00000356005 SPEGQ15772 3267 aa6.73□□□□□ -1.33
FN1-204ENST00000356005 FREM2Q5SZK8 3169 aa6.71□□□□□ -1.34
FN1-204ENST00000356005 ADGRG4Q8IZF6 3080 aa6.69□□□□□ -1.34
FN1-204ENST00000356005 SPTBN5Q9NRC6 3674 aaKnown RBP6.68□□□□□ -1.34
FN1-204ENST00000356005 KTN1-AS1Q86SY8 53 aa6.68□□□□□ -1.34
FN1-204ENST00000356005 TENM1Q9UKZ4 2725 aa6.65□□□□□ -1.35
FN1-204ENST00000356005 CELSR2Q9HCU4 2923 aa6.65□□□□□ -1.35
FN1-204ENST00000356005 EYSQ5T1H1 3165 aa6.65□□□□□ -1.35
FN1-204ENST00000356005 ATMQ13315 3056 aa6.64□□□□□ -1.35
FN1-204ENST00000356005 ASB16-AS1Q495Z4 193 aa6.64□□□□□ -1.35
FN1-204ENST00000356005 TACC2O95359 2948 aa6.64□□□□□ -1.35
FN1-204ENST00000356005 LCA10Q71F78 164 aa6.63□□□□□ -1.35
FN1-204ENST00000356005 Q8N9P0 234 aaPredicted RBP6.63□□□□□ -1.35
FN1-204ENST00000356005 Q8NDZ9 215 aa6.63□□□□□ -1.35
FN1-204ENST00000356005 Q75L30 129 aa6.62□□□□□ -1.35
FN1-204ENST00000356005 DMXL1Q9Y485 3027 aa6.62□□□□□ -1.35
FN1-204ENST00000356005 M0QZ58 72 aa6.6□□□□□ -1.35
FN1-204ENST00000356005 CFAP47Q6ZTR5 3102 aa6.6□□□□□ -1.35
FN1-204ENST00000356005 A0A087X002 238 aa6.58□□□□□ -1.36
FN1-204ENST00000356005 TENM4Q6N022 2769 aa6.58□□□□□ -1.36
FN1-204ENST00000356005 NIPBLQ6KC79 2804 aaeCLIP6.57□□□□□ -1.36
FN1-204ENST00000356005 H1FX-AS1Q4G0G2 97 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms