RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 USP24Q9UPU5 2620 aa4.72□□□□□ -1.65
CCR9-201ENST00000355983 IGF2RP11717 2491 aa4.71□□□□□ -1.66
CCR9-201ENST00000355983 PTPN13Q12923 2485 aa4.71□□□□□ -1.66
CCR9-201ENST00000355983 MYO9AB2RTY4 2548 aa4.71□□□□□ -1.66
CCR9-201ENST00000355983 DNAH10OSP0CZ25 163 aa4.69□□□□□ -1.66
CCR9-201ENST00000355983 Q96NJ1 140 aa4.69□□□□□ -1.66
CCR9-201ENST00000355983 DEFB113Q30KQ7 82 aa4.69□□□□□ -1.66
CCR9-201ENST00000355983 UQCR11O14957 56 aa4.68□□□□□ -1.66
CCR9-201ENST00000355983 MRPL34Q9BQ48 92 aaKnown RBP4.68□□□□□ -1.66
CCR9-201ENST00000355983 FN1P02751 2386 aaKnown RBP4.68□□□□□ -1.66
CCR9-201ENST00000355983 ACACBO00763 2458 aa4.68□□□□□ -1.66
CCR9-201ENST00000355983 DMAC1Q96GE9 116 aa4.68□□□□□ -1.66
CCR9-201ENST00000355983 UTP20O75691 2785 aaKnown RBP4.67□□□□□ -1.66
CCR9-201ENST00000355983 A0A1B0GU69 56 aa4.67□□□□□ -1.66
CCR9-201ENST00000355983 MIR22HGQ0VDD5 57 aa4.67□□□□□ -1.66
CCR9-201ENST00000355983 CHD8Q9HCK8 2581 aa4.67□□□□□ -1.66
CCR9-201ENST00000355983 A0A1B0GVX0 72 aa4.67□□□□□ -1.66
CCR9-201ENST00000355983 KRTAP13-3Q3SY46 172 aa4.66□□□□□ -1.66
CCR9-201ENST00000355983 CSAG1Q6PB30 78 aa4.65□□□□□ -1.66
CCR9-201ENST00000355983 KRTAP1-3Q8IUG1 177 aa4.65□□□□□ -1.66
CCR9-201ENST00000355983 ANKRD17O75179 2603 aaKnown RBP4.65□□□□□ -1.66
CCR9-201ENST00000355983 PRLHP81277 87 aa4.65□□□□□ -1.67
CCR9-201ENST00000355983 DOPEY1Q5JWR5 2465 aa4.64□□□□□ -1.67
CCR9-201ENST00000355983 ZANQ9Y493 2812 aa4.64□□□□□ -1.67
CCR9-201ENST00000355983 ANK3Q12955 4377 aaKnown RBP4.64□□□□□ -1.67
CCR9-201ENST00000355983 IGSF10Q6WRI0 2623 aa4.63□□□□□ -1.67
CCR9-201ENST00000355983 CSMD2Q7Z408 3487 aa4.63□□□□□ -1.67
CCR9-201ENST00000355983 ZFYVE26Q68DK2 2539 aa4.63□□□□□ -1.67
CCR9-201ENST00000355983 USP9YO00507 2555 aaPredicted RBP4.63□□□□□ -1.67
CCR9-201ENST00000355983 J3QKU1 62 aa4.62□□□□□ -1.67
CCR9-201ENST00000355983 ZNF861PO60384 105 aa4.62□□□□□ -1.67
CCR9-201ENST00000355983 USP9XQ93008 2570 aaPredicted RBP4.62□□□□□ -1.67
CCR9-201ENST00000355983 IGHV6-1A0A0B4J1U7 121 aa4.61□□□□□ -1.67
CCR9-201ENST00000355983 GCN1Q92616 2671 aaKnown RBP4.61□□□□□ -1.67
CCR9-201ENST00000355983 TENM2Q9NT68 2774 aa4.61□□□□□ -1.67
CCR9-201ENST00000355983 KRTAP10-3P60369 221 aa4.6□□□□□ -1.67
CCR9-201ENST00000355983 ZNF706Q9Y5V0 76 aaPredicted RBP4.6□□□□□ -1.67
CCR9-201ENST00000355983 CDK2AP2O75956 126 aa4.6□□□□□ -1.67
CCR9-201ENST00000355983 UBR5O95071 2799 aaPredicted RBP4.6□□□□□ -1.67
CCR9-201ENST00000355983 TEX15Q9BXT5 2789 aa4.6□□□□□ -1.67
CCR9-201ENST00000355983 FBN2P35556 2912 aa4.6□□□□□ -1.67
CCR9-201ENST00000355983 NBEAL2Q6ZNJ1 2754 aa4.59□□□□□ -1.67
CCR9-201ENST00000355983 FLNCQ14315 2725 aa4.59□□□□□ -1.67
CCR9-201ENST00000355983 EPG5Q9HCE0 2579 aa4.58□□□□□ -1.68
CCR9-201ENST00000355983 FAM208BQ5VWN6 2430 aa4.58□□□□□ -1.68
CCR9-201ENST00000355983 C1orf134Q5TEV5 83 aa4.58□□□□□ -1.68
CCR9-201ENST00000355983 KRTAP13-1Q8IUC0 172 aa4.58□□□□□ -1.68
CCR9-201ENST00000355983 OTOGQ6ZRI0 2925 aa4.58□□□□□ -1.68
CCR9-201ENST00000355983 CFAP46Q8IYW2 2715 aa4.58□□□□□ -1.68
CCR9-201ENST00000355983 A0A096LNI7 61 aa4.58□□□□□ -1.68
CCR9-201ENST00000355983 LINC00483Q53H64 154 aa4.58□□□□□ -1.68
CCR9-201ENST00000355983 NIPBLQ6KC79 2804 aaeCLIP4.58□□□□□ -1.68
CCR9-201ENST00000355983 HIVEP2P31629 2446 aa4.57□□□□□ -1.68
CCR9-201ENST00000355983 ROMO1P60602 79 aa4.57□□□□□ -1.68
CCR9-201ENST00000355983 CASC10Q5T4H9 136 aa4.57□□□□□ -1.68
CCR9-201ENST00000355983 DNAH1Q9P2D7 4330 aa4.57□□□□□ -1.68
CCR9-201ENST00000355983 CENPEQ02224 2701 aa4.57□□□□□ -1.68
CCR9-201ENST00000355983 KRTAP1-1Q07627 177 aa4.56□□□□□ -1.68
CCR9-201ENST00000355983 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
CCR9-201ENST00000355983 Q5W150 140 aa4.56□□□□□ -1.68
CCR9-201ENST00000355983 LRRK2Q5S007 2527 aa4.56□□□□□ -1.68
CCR9-201ENST00000355983 IGLV7-43P04211 117 aa4.56□□□□□ -1.68
CCR9-201ENST00000355983 NF1P21359 2839 aa4.55□□□□□ -1.68
CCR9-201ENST00000355983 KRTAP10-9P60411 292 aa4.55□□□□□ -1.68
CCR9-201ENST00000355983 NOTCH2NLQ7Z3S9 236 aa4.54□□□□□ -1.68
CCR9-201ENST00000355983 CHTF8P0CG12 524 aa4.54□□□□□ -1.68
CCR9-201ENST00000355983 POLQO75417 2590 aa4.53□□□□□ -1.68
CCR9-201ENST00000355983 CUBNO60494 3623 aa4.53□□□□□ -1.68
CCR9-201ENST00000355983 FAM229AH3BQW9 127 aa4.52□□□□□ -1.69
CCR9-201ENST00000355983 KRTAP11-1Q8IUC1 163 aa4.52□□□□□ -1.69
CCR9-201ENST00000355983 K7EIL1 84 aa4.52□□□□□ -1.69
CCR9-201ENST00000355983 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
CCR9-201ENST00000355983 C14orf177Q52M58 125 aa4.51□□□□□ -1.69
CCR9-201ENST00000355983 NAV2Q8IVL1 2488 aa4.51□□□□□ -1.69
CCR9-201ENST00000355983 A8MUU9 505 aa4.51□□□□□ -1.69
CCR9-201ENST00000355983 MYO18BQ8IUG5 2567 aa4.5□□□□□ -1.69
CCR9-201ENST00000355983 FASNP49327 2511 aaKnown RBP4.48□□□□□ -1.69
CCR9-201ENST00000355983 INAFM1C9JVW0 142 aa4.48□□□□□ -1.69
CCR9-201ENST00000355983 WWC2-AS2Q96NR7 200 aa4.48□□□□□ -1.69
CCR9-201ENST00000355983 LY6G6CO95867 125 aa4.48□□□□□ -1.69
CCR9-201ENST00000355983 SETD2Q9BYW2 2564 aaPredicted RBP4.47□□□□□ -1.69
CCR9-201ENST00000355983 TENM4Q6N022 2769 aa4.47□□□□□ -1.69
CCR9-201ENST00000355983 IGLV5-52A0A0A0MRZ9 124 aa4.47□□□□□ -1.69
CCR9-201ENST00000355983 IGLV9-49A0A0B4J1Y8 123 aa4.47□□□□□ -1.69
CCR9-201ENST00000355983 HIVEP1P15822 2718 aa4.46□□□□□ -1.7
CCR9-201ENST00000355983 MAST4O15021 2626 aa4.46□□□□□ -1.7
CCR9-201ENST00000355983 F8P00451 2351 aa4.46□□□□□ -1.7
CCR9-201ENST00000355983 FBN3Q75N90 2809 aa4.46□□□□□ -1.7
CCR9-201ENST00000355983 ITPR3Q14573 2671 aa4.46□□□□□ -1.7
CCR9-201ENST00000355983 ABCA12Q86UK0 2595 aa4.45□□□□□ -1.7
CCR9-201ENST00000355983 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
CCR9-201ENST00000355983 SONP18583 2426 aaKnown RBP4.44□□□□□ -1.7
CCR9-201ENST00000355983 LINC00304Q8N9R0 145 aa4.44□□□□□ -1.7
CCR9-201ENST00000355983 FLNBO75369 2602 aaKnown RBP4.44□□□□□ -1.7
CCR9-201ENST00000355983 HELZ2Q9BYK8 2649 aaKnown RBP4.42□□□□□ -1.7
CCR9-201ENST00000355983 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
CCR9-201ENST00000355983 MTORP42345 2549 aa4.41□□□□□ -1.7
CCR9-201ENST00000355983 P0C880 135 aa4.4□□□□□ -1.71
CCR9-201ENST00000355983 ANAPC11Q9NYG5 84 aa4.4□□□□□ -1.71
CCR9-201ENST00000355983 H0YAA0 97 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms