RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CFC1BP0CG36 223 aa9.3□□□□□ -0.92
PDLIM7-201ENST00000355572 CFC1P0CG37 223 aa9.3□□□□□ -0.92
PDLIM7-201ENST00000355572 GTF2H5Q6ZYL4 71 aa9.3□□□□□ -0.92
PDLIM7-201ENST00000355572 RAB37Q96AX2 223 aa9.3□□□□□ -0.92
PDLIM7-201ENST00000355572 COX7BP24311 80 aa9.29□□□□□ -0.92
PDLIM7-201ENST00000355572 UBE2V1Q13404 147 aa9.29□□□□□ -0.92
PDLIM7-201ENST00000355572 PRO1854Q9UHT4 67 aa9.29□□□□□ -0.92
PDLIM7-201ENST00000355572 K7EP34 96 aa9.27□□□□□ -0.93
PDLIM7-201ENST00000355572 LINC01547P58512 204 aaPredicted RBP9.27□□□□□ -0.93
PDLIM7-201ENST00000355572 HRCT1Q6UXD1 115 aa9.27□□□□□ -0.93
PDLIM7-201ENST00000355572 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
PDLIM7-201ENST00000355572 A0A0G2JQZ4 141 aa9.25□□□□□ -0.93
PDLIM7-201ENST00000355572 SLC25A20O43772 301 aa9.25□□□□□ -0.93
PDLIM7-201ENST00000355572 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
PDLIM7-201ENST00000355572 SMIM29Q86T20 159 aa9.25□□□□□ -0.93
PDLIM7-201ENST00000355572 SPCS1Q9Y6A9 102 aa9.25□□□□□ -0.93
PDLIM7-201ENST00000355572 A0A0U1RQV1 116 aa9.24□□□□□ -0.93
PDLIM7-201ENST00000355572 Q1RN00 199 aa9.24□□□□□ -0.93
PDLIM7-201ENST00000355572 DEFB105AQ8NG35 78 aa9.24□□□□□ -0.93
PDLIM7-201ENST00000355572 CBY1Q9Y3M2 126 aa9.24□□□□□ -0.93
PDLIM7-201ENST00000355572 XP32Q5T750 250 aa9.22□□□□□ -0.93
PDLIM7-201ENST00000355572 TRBV20-1A0A075B6N2 111 aa9.21□□□□□ -0.94
PDLIM7-201ENST00000355572 NAA38Q9BRA0 125 aaKnown RBP9.21□□□□□ -0.94
PDLIM7-201ENST00000355572 TRAV13-2A0A0B4J235 113 aa9.2□□□□□ -0.94
PDLIM7-201ENST00000355572 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
PDLIM7-201ENST00000355572 TRBV7-6A0A0J9YX20 115 aa9.19□□□□□ -0.94
PDLIM7-201ENST00000355572 LAMTOR3Q9UHA4 124 aa9.19□□□□□ -0.94
PDLIM7-201ENST00000355572 IGLV5-48A0A075B6I7 105 aa9.18□□□□□ -0.94
PDLIM7-201ENST00000355572 H7C2G1 150 aa9.17□□□□□ -0.94
PDLIM7-201ENST00000355572 TEX49A0A1B0GTD5 131 aa9.16□□□□□ -0.94
PDLIM7-201ENST00000355572 COX6CP09669 75 aa9.16□□□□□ -0.94
PDLIM7-201ENST00000355572 KRTAP9-2Q9BYQ4 174 aa9.16□□□□□ -0.94
PDLIM7-201ENST00000355572 PSMB2P49721 201 aa9.15□□□□□ -0.94
PDLIM7-201ENST00000355572 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
PDLIM7-201ENST00000355572 TRIAP1O43715 76 aa9.13□□□□□ -0.95
PDLIM7-201ENST00000355572 F8W1H4 67 aa9.12□□□□□ -0.95
PDLIM7-201ENST00000355572 SCGB1C2P0DMR2 95 aa9.12□□□□□ -0.95
PDLIM7-201ENST00000355572 SEC61BP60468 96 aaKnown RBP9.12□□□□□ -0.95
PDLIM7-201ENST00000355572 ATXN8Q156A1 80 aa9.11□□□□□ -0.95
PDLIM7-201ENST00000355572 LIMD2Q9BT23 127 aa9.11□□□□□ -0.95
PDLIM7-201ENST00000355572 CD164Q04900 197 aa9.1□□□□□ -0.95
PDLIM7-201ENST00000355572 H3BMG7 143 aa9.09□□□□□ -0.95
PDLIM7-201ENST00000355572 TCL1BO95988 128 aa9.09□□□□□ -0.95
PDLIM7-201ENST00000355572 KRTAP19-2Q3LHN2 52 aa9.09□□□□□ -0.95
PDLIM7-201ENST00000355572 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
PDLIM7-201ENST00000355572 C1orf195Q5TG92 126 aa9.08□□□□□ -0.96
PDLIM7-201ENST00000355572 LINC00575Q6W349 94 aa9.08□□□□□ -0.96
PDLIM7-201ENST00000355572 PRO0461Q9UI25 63 aa9.07□□□□□ -0.96
PDLIM7-201ENST00000355572 LST1O00453 97 aa9.06□□□□□ -0.96
PDLIM7-201ENST00000355572 Q5XG85 94 aa9.06□□□□□ -0.96
PDLIM7-201ENST00000355572 PCOTHQ58A44 107 aa9.05□□□□□ -0.96
PDLIM7-201ENST00000355572 H0YGX0 51 aa9.04□□□□□ -0.96
PDLIM7-201ENST00000355572 TRACP01848 142 aa9.03□□□□□ -0.96
PDLIM7-201ENST00000355572 Q6ZQY7 126 aa9.03□□□□□ -0.96
PDLIM7-201ENST00000355572 H3BT86 120 aa9.02□□□□□ -0.97
PDLIM7-201ENST00000355572 A0A1B0GX51 115 aa9.01□□□□□ -0.97
PDLIM7-201ENST00000355572 hADV29S1A0JD25 119 aa9□□□□□ -0.97
PDLIM7-201ENST00000355572 C9JAW5 83 aa8.99□□□□□ -0.97
PDLIM7-201ENST00000355572 CLEC2BQ92478 149 aa8.99□□□□□ -0.97
PDLIM7-201ENST00000355572 K7ERU9 68 aa8.98□□□□□ -0.97
PDLIM7-201ENST00000355572 IGFL1Q6UW32 110 aa8.98□□□□□ -0.97
PDLIM7-201ENST00000355572 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
PDLIM7-201ENST00000355572 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
PDLIM7-201ENST00000355572 TEN1Q86WV5 123 aa8.97□□□□□ -0.97
PDLIM7-201ENST00000355572 ANKRD29Q8N6D5 301 aa8.97□□□□□ -0.97
PDLIM7-201ENST00000355572 OCIAD2Q56VL3 154 aa8.96□□□□□ -0.98
PDLIM7-201ENST00000355572 J3QR89 54 aa8.95□□□□□ -0.98
PDLIM7-201ENST00000355572 SNCGO76070 127 aa8.94□□□□□ -0.98
PDLIM7-201ENST00000355572 MTURNQ8N3F0 131 aa8.94□□□□□ -0.98
PDLIM7-201ENST00000355572 DNAL4O96015 105 aa8.93□□□□□ -0.98
PDLIM7-201ENST00000355572 ETDBQ3ZM63 59 aa8.93□□□□□ -0.98
PDLIM7-201ENST00000355572 FAM218AQ96MZ4 157 aa8.93□□□□□ -0.98
PDLIM7-201ENST00000355572 TRBV7-7A0A0K0K1E9 115 aa8.92□□□□□ -0.98
PDLIM7-201ENST00000355572 F8WEM9 126 aa8.92□□□□□ -0.98
PDLIM7-201ENST00000355572 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
PDLIM7-201ENST00000355572 MT1HP80294 61 aa8.92□□□□□ -0.98
PDLIM7-201ENST00000355572 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.92□□□□□ -0.98
PDLIM7-201ENST00000355572 PPDPFLQ8WWR9 84 aa8.92□□□□□ -0.98
PDLIM7-201ENST00000355572 H3BQ85 93 aa8.89□□□□□ -0.99
PDLIM7-201ENST00000355572 Q6JHZ5 121 aa8.88□□□□□ -0.99
PDLIM7-201ENST00000355572 GHRHP01286 108 aa8.85□□□□□ -0.99
PDLIM7-201ENST00000355572 ORMDL1Q9P0S3 153 aa8.85□□□□□ -0.99
PDLIM7-201ENST00000355572 KRTAP9-6A0A140TA67 174 aa8.84□□□□□ -0.99
PDLIM7-201ENST00000355572 BAALC-AS2P0C853 105 aa8.84□□□□□ -0.99
PDLIM7-201ENST00000355572 TMEM256-PLSCR3K7ERE1 68 aa8.81□□□□□ -1
PDLIM7-201ENST00000355572 LCE2DQ5TA82 110 aaPredicted RBP8.81□□□□□ -1
PDLIM7-201ENST00000355572 FAM240AA0A1B0GVK7 77 aa8.79□□□□□ -1
PDLIM7-201ENST00000355572 NDUFV3P56181 108 aaKnown RBP8.79□□□□□ -1
PDLIM7-201ENST00000355572 OBSCN-AS1Q96MR7 158 aa8.79□□□□□ -1
PDLIM7-201ENST00000355572 FLGP20930 4061 aaPredicted RBP8.79□□□□□ -1
PDLIM7-201ENST00000355572 Q96NJ1 140 aa8.77□□□□□ -1.01
PDLIM7-201ENST00000355572 JMJD7-PLA2G4BH0Y9G9 81 aa8.76□□□□□ -1.01
PDLIM7-201ENST00000355572 Q6Q795 121 aa8.76□□□□□ -1.01
PDLIM7-201ENST00000355572 LORP23490 312 aaPredicted RBP8.75□□□□□ -1.01
PDLIM7-201ENST00000355572 C21orf62-AS1Q17RA5 79 aa8.75□□□□□ -1.01
PDLIM7-201ENST00000355572 ACYP1P07311 99 aa8.74□□□□□ -1.01
PDLIM7-201ENST00000355572 KRTAP10-6P60371 365 aaPredicted RBP8.74□□□□□ -1.01
PDLIM7-201ENST00000355572 VPS25Q9BRG1 176 aa8.74□□□□□ -1.01
PDLIM7-201ENST00000355572 A0A1W2PNM2 257 aa8.73□□□□□ -1.01
PDLIM7-201ENST00000355572 A0A087WSZ3 146 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms