RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 ZCCHC13Q8WW36 166 aaKnown RBP3.63□□□□□ -1.83
SRGAP1-201ENST00000355086 UTRNP46939 3433 aa3.62□□□□□ -1.83
SRGAP1-201ENST00000355086 FAM229BQ4G0N7 80 aa3.62□□□□□ -1.83
SRGAP1-201ENST00000355086 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.62□□□□□ -1.83
SRGAP1-201ENST00000355086 NOTCH1P46531 2555 aa3.61□□□□□ -1.83
SRGAP1-201ENST00000355086 LAMA2P24043 3122 aaKnown RBP3.61□□□□□ -1.83
SRGAP1-201ENST00000355086 UNC79Q9P2D8 2635 aa3.6□□□□□ -1.83
SRGAP1-201ENST00000355086 H3BS24 57 aa3.6□□□□□ -1.83
SRGAP1-201ENST00000355086 H1FX-AS1Q4G0G2 97 aa3.59□□□□□ -1.83
SRGAP1-201ENST00000355086 TEP1Q99973 2627 aaKnown RBP3.59□□□□□ -1.83
SRGAP1-201ENST00000355086 A0A096LNT2 108 aa3.59□□□□□ -1.83
SRGAP1-201ENST00000355086 PLAC4Q8WY50 150 aa3.59□□□□□ -1.84
SRGAP1-201ENST00000355086 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.84
SRGAP1-201ENST00000355086 LINC01558Q9Y6Z2 57 aa3.58□□□□□ -1.84
SRGAP1-201ENST00000355086 Q5W150 140 aa3.58□□□□□ -1.84
SRGAP1-201ENST00000355086 Q8N9P0 234 aaPredicted RBP3.58□□□□□ -1.84
SRGAP1-201ENST00000355086 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
SRGAP1-201ENST00000355086 RPL37P61927 97 aaKnown RBP3.56□□□□□ -1.84
SRGAP1-201ENST00000355086 MMP24-AS1A0A0U1RRL7 71 aa3.56□□□□□ -1.84
SRGAP1-201ENST00000355086 COL6A5A8TX70 2615 aa3.56□□□□□ -1.84
SRGAP1-201ENST00000355086 PLAC8Q9NZF1 115 aa3.55□□□□□ -1.84
SRGAP1-201ENST00000355086 ROMO1P60602 79 aa3.55□□□□□ -1.84
SRGAP1-201ENST00000355086 M0QZ58 72 aa3.55□□□□□ -1.84
SRGAP1-201ENST00000355086 FREM2Q5SZK8 3169 aa3.54□□□□□ -1.84
SRGAP1-201ENST00000355086 KRTAP1-3Q8IUG1 177 aa3.53□□□□□ -1.84
SRGAP1-201ENST00000355086 Q5VV11 94 aa3.53□□□□□ -1.84
SRGAP1-201ENST00000355086 Q5VSD8 79 aa3.52□□□□□ -1.85
SRGAP1-201ENST00000355086 ADM2Q7Z4H4 148 aa3.5□□□□□ -1.85
SRGAP1-201ENST00000355086 MAP1AP78559 2803 aaPredicted RBP3.5□□□□□ -1.85
SRGAP1-201ENST00000355086 FRYQ5TBA9 3013 aa3.5□□□□□ -1.85
SRGAP1-201ENST00000355086 TRIOO75962 3097 aa3.49□□□□□ -1.85
SRGAP1-201ENST00000355086 KRTAP1-1Q07627 177 aa3.49□□□□□ -1.85
SRGAP1-201ENST00000355086 SPRR1AP35321 89 aa3.49□□□□□ -1.85
SRGAP1-201ENST00000355086 LINC00472Q9H8W2 130 aa3.49□□□□□ -1.85
SRGAP1-201ENST00000355086 FP248Q71RG6 208 aaPredicted RBP3.48□□□□□ -1.85
SRGAP1-201ENST00000355086 Q5XG85 94 aa3.48□□□□□ -1.85
SRGAP1-201ENST00000355086 GCN1Q92616 2671 aaKnown RBP3.47□□□□□ -1.85
SRGAP1-201ENST00000355086 OXTP01178 125 aa3.46□□□□□ -1.86
SRGAP1-201ENST00000355086 MGAQ8IWI9 3026 aa3.45□□□□□ -1.86
SRGAP1-201ENST00000355086 NBEAL2Q6ZNJ1 2754 aa3.45□□□□□ -1.86
SRGAP1-201ENST00000355086 ZNF292O60281 2723 aa3.45□□□□□ -1.86
SRGAP1-201ENST00000355086 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
SRGAP1-201ENST00000355086 C20orf166-AS1Q96NR2 134 aa3.45□□□□□ -1.86
SRGAP1-201ENST00000355086 SPRR1BP22528 89 aa3.44□□□□□ -1.86
SRGAP1-201ENST00000355086 KRTAP16-1A8MUX0 517 aa3.44□□□□□ -1.86
SRGAP1-201ENST00000355086 Q8NDZ9 215 aa3.44□□□□□ -1.86
SRGAP1-201ENST00000355086 KRTAP10-1P60331 282 aa3.44□□□□□ -1.86
SRGAP1-201ENST00000355086 KRTAP26-1Q6PEX3 210 aa3.44□□□□□ -1.86
SRGAP1-201ENST00000355086 CYSTM1Q9H1C7 97 aa3.44□□□□□ -1.86
SRGAP1-201ENST00000355086 IGSF10Q6WRI0 2623 aa3.43□□□□□ -1.86
SRGAP1-201ENST00000355086 XIRP2A4UGR9 3374 aa3.42□□□□□ -1.86
SRGAP1-201ENST00000355086 PANO1I0J062 215 aa3.42□□□□□ -1.86
SRGAP1-201ENST00000355086 NSD1Q96L73 2696 aaPredicted RBP3.42□□□□□ -1.86
SRGAP1-201ENST00000355086 Q6ZR54 194 aa3.42□□□□□ -1.86
SRGAP1-201ENST00000355086 MKI67P46013 3256 aaKnown RBP3.42□□□□□ -1.86
SRGAP1-201ENST00000355086 LCE6AA0A183 80 aa3.41□□□□□ -1.86
SRGAP1-201ENST00000355086 KRTAP10-2P60368 255 aa3.41□□□□□ -1.86
SRGAP1-201ENST00000355086 KMT2BQ9UMN6 2715 aaPredicted RBP3.41□□□□□ -1.86
SRGAP1-201ENST00000355086 WDFY4Q6ZS81 3184 aa3.4□□□□□ -1.86
SRGAP1-201ENST00000355086 REV3LO60673 3130 aa3.4□□□□□ -1.87
SRGAP1-201ENST00000355086 UNC80Q8N2C7 3258 aa3.4□□□□□ -1.87
SRGAP1-201ENST00000355086 CELSR3Q9NYQ7 3312 aa3.4□□□□□ -1.87
SRGAP1-201ENST00000355086 A8MUU9 505 aa3.39□□□□□ -1.87
SRGAP1-201ENST00000355086 DMXL2Q8TDJ6 3036 aa3.39□□□□□ -1.87
SRGAP1-201ENST00000355086 PRUNE2Q8WUY3 3088 aa3.39□□□□□ -1.87
SRGAP1-201ENST00000355086 KRTAP1-5Q9BYS1 174 aa3.39□□□□□ -1.87
SRGAP1-201ENST00000355086 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
SRGAP1-201ENST00000355086 TRANK1O15050 2925 aa3.38□□□□□ -1.87
SRGAP1-201ENST00000355086 VPS13AQ96RL7 3174 aa3.37□□□□□ -1.87
SRGAP1-201ENST00000355086 CRYBG3Q68DQ2 2970 aa3.37□□□□□ -1.87
SRGAP1-201ENST00000355086 ITPR2Q14571 2701 aa3.37□□□□□ -1.87
SRGAP1-201ENST00000355086 UBR5O95071 2799 aaPredicted RBP3.37□□□□□ -1.87
SRGAP1-201ENST00000355086 APCP25054 2843 aa3.37□□□□□ -1.87
SRGAP1-201ENST00000355086 A0A087X002 238 aa3.36□□□□□ -1.87
SRGAP1-201ENST00000355086 CHD7Q9P2D1 2997 aa3.36□□□□□ -1.87
SRGAP1-201ENST00000355086 UTP20O75691 2785 aaKnown RBP3.36□□□□□ -1.87
SRGAP1-201ENST00000355086 ASH1LQ9NR48 2969 aaKnown RBP3.36□□□□□ -1.87
SRGAP1-201ENST00000355086 KALRNO60229 2985 aa3.34□□□□□ -1.87
SRGAP1-201ENST00000355086 KRTAP25-1Q3LHN0 102 aa3.34□□□□□ -1.87
SRGAP1-201ENST00000355086 A8MU10 97 aa3.33□□□□□ -1.88
SRGAP1-201ENST00000355086 LAMA3Q16787 3333 aa3.33□□□□□ -1.88
SRGAP1-201ENST00000355086 DSPP15924 2871 aaKnown RBP3.33□□□□□ -1.88
SRGAP1-201ENST00000355086 RANBP2P49792 3224 aaKnown RBP3.32□□□□□ -1.88
SRGAP1-201ENST00000355086 TNP1P09430 55 aa3.32□□□□□ -1.88
SRGAP1-201ENST00000355086 FRYLO94915 3013 aa3.31□□□□□ -1.88
SRGAP1-201ENST00000355086 NOTCH2NLQ7Z3S9 236 aa3.31□□□□□ -1.88
SRGAP1-201ENST00000355086 KRTAP29-1A8MX34 341 aaPredicted RBP3.3□□□□□ -1.88
SRGAP1-201ENST00000355086 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
SRGAP1-201ENST00000355086 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
SRGAP1-201ENST00000355086 COL12A1Q99715 3063 aa3.29□□□□□ -1.88
SRGAP1-201ENST00000355086 KRTAP4-16G5E9R7 235 aaPredicted RBP3.29□□□□□ -1.88
SRGAP1-201ENST00000355086 RPS29P62273 56 aaKnown RBP3.29□□□□□ -1.88
SRGAP1-201ENST00000355086 LAMA1P25391 3075 aa3.29□□□□□ -1.88
SRGAP1-201ENST00000355086 FLNCQ14315 2725 aa3.28□□□□□ -1.88
SRGAP1-201ENST00000355086 TACC2O95359 2948 aa3.28□□□□□ -1.88
SRGAP1-201ENST00000355086 BRCA2P51587 3418 aa3.28□□□□□ -1.88
SRGAP1-201ENST00000355086 CHD9Q3L8U1 2897 aa3.28□□□□□ -1.88
SRGAP1-201ENST00000355086 ITPR1Q14643 2758 aa3.27□□□□□ -1.89
SRGAP1-201ENST00000355086 VCANP13611 3396 aa3.27□□□□□ -1.89
SRGAP1-201ENST00000355086 HTTP42858 3142 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms