RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 TENM4Q6N022 2769 aa6.19□□□□□ -1.42
GABPA-201ENST00000354828 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
GABPA-201ENST00000354828 TMEM254Q8TBM7 123 aa6.19□□□□□ -1.42
GABPA-201ENST00000354828 PRR26Q8N8Z3 221 aa6.19□□□□□ -1.42
GABPA-201ENST00000354828 A8MWP4 228 aa6.18□□□□□ -1.42
GABPA-201ENST00000354828 Q8N377 158 aa6.18□□□□□ -1.42
GABPA-201ENST00000354828 ERC2-IT1O76042 136 aa6.17□□□□□ -1.42
GABPA-201ENST00000354828 KRTAP21-3Q3LHN1 58 aa6.17□□□□□ -1.42
GABPA-201ENST00000354828 CELSR2Q9HCU4 2923 aa6.17□□□□□ -1.42
GABPA-201ENST00000354828 MRPL34Q9BQ48 92 aaKnown RBP6.17□□□□□ -1.42
GABPA-201ENST00000354828 CRYBG3Q68DQ2 2970 aa6.16□□□□□ -1.42
GABPA-201ENST00000354828 STAB2Q8WWQ8 2551 aa6.16□□□□□ -1.42
GABPA-201ENST00000354828 NIPBLQ6KC79 2804 aaeCLIP6.15□□□□□ -1.42
GABPA-201ENST00000354828 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.42
GABPA-201ENST00000354828 CCDC179H3BU77 68 aa6.15□□□□□ -1.42
GABPA-201ENST00000354828 SVIPQ8NHG7 77 aa6.15□□□□□ -1.42
GABPA-201ENST00000354828 KMT2BQ9UMN6 2715 aaPredicted RBP6.15□□□□□ -1.43
GABPA-201ENST00000354828 IGLV7-46A0A075B6I9 117 aa6.15□□□□□ -1.43
GABPA-201ENST00000354828 Q5VSD8 79 aa6.15□□□□□ -1.43
GABPA-201ENST00000354828 KRTAP1-5Q9BYS1 174 aa6.14□□□□□ -1.43
GABPA-201ENST00000354828 IGLV5-37A0A075B6J1 123 aa6.13□□□□□ -1.43
GABPA-201ENST00000354828 ACYP2P14621 99 aa6.13□□□□□ -1.43
GABPA-201ENST00000354828 K7EQZ3 153 aa6.13□□□□□ -1.43
GABPA-201ENST00000354828 SMCPP49901 116 aaPredicted RBP6.12□□□□□ -1.43
GABPA-201ENST00000354828 PLAC8Q9NZF1 115 aa6.12□□□□□ -1.43
GABPA-201ENST00000354828 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
GABPA-201ENST00000354828 C8orf17Q9NRJ1 99 aa6.12□□□□□ -1.43
GABPA-201ENST00000354828 A0A1B0GVX0 72 aa6.12□□□□□ -1.43
GABPA-201ENST00000354828 HRNRQ86YZ3 2850 aaPredicted RBP6.11□□□□□ -1.43
GABPA-201ENST00000354828 DCHS1Q96JQ0 3298 aa6.1□□□□□ -1.43
GABPA-201ENST00000354828 KRTAP10-2P60368 255 aa6.1□□□□□ -1.43
GABPA-201ENST00000354828 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
GABPA-201ENST00000354828 KRTAP10-1P60331 282 aa6.09□□□□□ -1.43
GABPA-201ENST00000354828 Q6ZSA8 131 aa6.09□□□□□ -1.43
GABPA-201ENST00000354828 ASH1LQ9NR48 2969 aaKnown RBP6.08□□□□□ -1.44
GABPA-201ENST00000354828 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
GABPA-201ENST00000354828 H3BPC8 53 aa6.07□□□□□ -1.44
GABPA-201ENST00000354828 NF1P21359 2839 aa6.06□□□□□ -1.44
GABPA-201ENST00000354828 PRO0461Q9UI25 63 aa6.06□□□□□ -1.44
GABPA-201ENST00000354828 M0R2T5 61 aa6.06□□□□□ -1.44
GABPA-201ENST00000354828 FAM229BQ4G0N7 80 aa6.06□□□□□ -1.44
GABPA-201ENST00000354828 A0A1B0GU69 56 aa6.05□□□□□ -1.44
GABPA-201ENST00000354828 SMIM26A0A096LP01 95 aa6.04□□□□□ -1.44
GABPA-201ENST00000354828 DCHS2Q6V1P9 2916 aa6.04□□□□□ -1.44
GABPA-201ENST00000354828 RELNP78509 3460 aa6.04□□□□□ -1.44
GABPA-201ENST00000354828 PSPHP1O15172 72 aa6.02□□□□□ -1.45
GABPA-201ENST00000354828 CD164Q04900 197 aa6.02□□□□□ -1.45
GABPA-201ENST00000354828 A0A1W2PNM2 257 aa6.02□□□□□ -1.45
GABPA-201ENST00000354828 Q6ZR54 194 aa6.02□□□□□ -1.45
GABPA-201ENST00000354828 DMBT1Q9UGM3 2413 aaPredicted RBP6.01□□□□□ -1.45
GABPA-201ENST00000354828 LAMA5O15230 3695 aa6□□□□□ -1.45
GABPA-201ENST00000354828 A0A0U1RQV1 116 aa6□□□□□ -1.45
GABPA-201ENST00000354828 FAM104AQ969W3 186 aa6□□□□□ -1.45
GABPA-201ENST00000354828 IGLV8-61A0A075B6I0 122 aa5.99□□□□□ -1.45
GABPA-201ENST00000354828 DMDP11532 3685 aa5.98□□□□□ -1.45
GABPA-201ENST00000354828 FBN2P35556 2912 aa5.97□□□□□ -1.45
GABPA-201ENST00000354828 IGLV5-48A0A075B6I7 105 aa5.96□□□□□ -1.46
GABPA-201ENST00000354828 MXRA5Q9NR99 2828 aa5.95□□□□□ -1.46
GABPA-201ENST00000354828 KRTAP26-1Q6PEX3 210 aa5.94□□□□□ -1.46
GABPA-201ENST00000354828 ASPMQ8IZT6 3477 aa5.94□□□□□ -1.46
GABPA-201ENST00000354828 Q8N1X5 172 aa5.93□□□□□ -1.46
GABPA-201ENST00000354828 SEC61BP60468 96 aaKnown RBP5.93□□□□□ -1.46
GABPA-201ENST00000354828 LINC01554Q52M75 96 aa5.91□□□□□ -1.46
GABPA-201ENST00000354828 SPRR1AP35321 89 aa5.91□□□□□ -1.46
GABPA-201ENST00000354828 Q8NDZ9 215 aa5.9□□□□□ -1.46
GABPA-201ENST00000354828 PANO1I0J062 215 aa5.9□□□□□ -1.47
GABPA-201ENST00000354828 OXTP01178 125 aa5.88□□□□□ -1.47
GABPA-201ENST00000354828 LINC01600Q96MT4 127 aa5.88□□□□□ -1.47
GABPA-201ENST00000354828 PDZD2O15018 2839 aa5.87□□□□□ -1.47
GABPA-201ENST00000354828 COA5Q86WW8 74 aa5.86□□□□□ -1.47
GABPA-201ENST00000354828 PMAIP1Q13794 54 aa5.86□□□□□ -1.47
GABPA-201ENST00000354828 FLG2Q5D862 2391 aaPredicted RBP5.86□□□□□ -1.47
GABPA-201ENST00000354828 WDFY3Q8IZQ1 3526 aa5.85□□□□□ -1.47
GABPA-201ENST00000354828 SPRR1BP22528 89 aa5.83□□□□□ -1.48
GABPA-201ENST00000354828 Q6ZRN7 208 aaPredicted RBP5.83□□□□□ -1.48
GABPA-201ENST00000354828 OTOGQ6ZRI0 2925 aa5.82□□□□□ -1.48
GABPA-201ENST00000354828 C4orf26Q17RF5 130 aa5.82□□□□□ -1.48
GABPA-201ENST00000354828 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
GABPA-201ENST00000354828 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
GABPA-201ENST00000354828 SMG1Q96Q15 3661 aaKnown RBP5.78□□□□□ -1.48
GABPA-201ENST00000354828 C1orf195Q5TG92 126 aa5.78□□□□□ -1.48
GABPA-201ENST00000354828 A0A087X002 238 aa5.77□□□□□ -1.49
GABPA-201ENST00000354828 A0A0D9SG42 100 aa5.76□□□□□ -1.49
GABPA-201ENST00000354828 CSAG1Q6PB30 78 aa5.76□□□□□ -1.49
GABPA-201ENST00000354828 SPINT4Q6UDR6 99 aa5.76□□□□□ -1.49
GABPA-201ENST00000354828 UQCR11O14957 56 aa5.76□□□□□ -1.49
GABPA-201ENST00000354828 SPINK7P58062 85 aa5.76□□□□□ -1.49
GABPA-201ENST00000354828 LINC00483Q53H64 154 aa5.74□□□□□ -1.49
GABPA-201ENST00000354828 TENM1Q9UKZ4 2725 aa5.74□□□□□ -1.49
GABPA-201ENST00000354828 MMP24-AS1A0A0U1RRL7 71 aa5.73□□□□□ -1.49
GABPA-201ENST00000354828 ZFHX4Q86UP3 3567 aa5.73□□□□□ -1.49
GABPA-201ENST00000354828 CELSR1Q9NYQ6 3014 aa5.72□□□□□ -1.49
GABPA-201ENST00000354828 LINC00472Q9H8W2 130 aa5.72□□□□□ -1.49
GABPA-201ENST00000354828 HRES1P13985 223 aa5.72□□□□□ -1.49
GABPA-201ENST00000354828 S4R3F8 94 aa5.71□□□□□ -1.49
GABPA-201ENST00000354828 NBPF19A0A087WUL8 3843 aa5.71□□□□□ -1.5
GABPA-201ENST00000354828 KLKP1Q107X0 134 aa5.71□□□□□ -1.5
GABPA-201ENST00000354828 CAMK2N1Q7Z7J9 78 aa5.7□□□□□ -1.5
GABPA-201ENST00000354828 A8MUN3 132 aa5.7□□□□□ -1.5
GABPA-201ENST00000354828 ZFHX3Q15911 3703 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 265.7 ms