RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 A0A096LNT2 108 aa6.28□□□□□ -1.4
COL11A1-201ENST00000353414 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
COL11A1-201ENST00000353414 CSAG1Q6PB30 78 aa6.28□□□□□ -1.4
COL11A1-201ENST00000353414 SPTBN5Q9NRC6 3674 aaKnown RBP6.27□□□□□ -1.41
COL11A1-201ENST00000353414 A0A1B0GU33 70 aa6.27□□□□□ -1.41
COL11A1-201ENST00000353414 FAM229BQ4G0N7 80 aa6.27□□□□□ -1.41
COL11A1-201ENST00000353414 SPINK7P58062 85 aa6.26□□□□□ -1.41
COL11A1-201ENST00000353414 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
COL11A1-201ENST00000353414 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
COL11A1-201ENST00000353414 MGAQ8IWI9 3026 aa6.24□□□□□ -1.41
COL11A1-201ENST00000353414 HRES1P13985 223 aa6.22□□□□□ -1.41
COL11A1-201ENST00000353414 WDFY3Q8IZQ1 3526 aa6.22□□□□□ -1.41
COL11A1-201ENST00000353414 KRTAP1-1Q07627 177 aa6.21□□□□□ -1.42
COL11A1-201ENST00000353414 R4GN34 69 aa6.21□□□□□ -1.42
COL11A1-201ENST00000353414 SPANXA2-OT1Q8N9U9 137 aa6.19□□□□□ -1.42
COL11A1-201ENST00000353414 CFAP47Q6ZTR5 3102 aa6.19□□□□□ -1.42
COL11A1-201ENST00000353414 Q8N9P0 234 aaPredicted RBP6.19□□□□□ -1.42
COL11A1-201ENST00000353414 MGAM2Q2M2H8 2515 aa6.17□□□□□ -1.42
COL11A1-201ENST00000353414 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.42
COL11A1-201ENST00000353414 ZCCHC13Q8WW36 166 aaKnown RBP6.15□□□□□ -1.43
COL11A1-201ENST00000353414 Q75L30 129 aa6.13□□□□□ -1.43
COL11A1-201ENST00000353414 M0QZ58 72 aa6.12□□□□□ -1.43
COL11A1-201ENST00000353414 PLAC4Q8WY50 150 aa6.12□□□□□ -1.43
COL11A1-201ENST00000353414 HECTD1Q9ULT8 2610 aa6.11□□□□□ -1.43
COL11A1-201ENST00000353414 FRYLO94915 3013 aa6.1□□□□□ -1.43
COL11A1-201ENST00000353414 KRTAP10-2P60368 255 aa6.1□□□□□ -1.43
COL11A1-201ENST00000353414 DMAC1Q96GE9 116 aa6.1□□□□□ -1.43
COL11A1-201ENST00000353414 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
COL11A1-201ENST00000353414 EPG5Q9HCE0 2579 aa6.09□□□□□ -1.43
COL11A1-201ENST00000353414 SEC61BP60468 96 aaKnown RBP6.09□□□□□ -1.44
COL11A1-201ENST00000353414 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
COL11A1-201ENST00000353414 ADM2Q7Z4H4 148 aa6.08□□□□□ -1.44
COL11A1-201ENST00000353414 CHD9Q3L8U1 2897 aa6.07□□□□□ -1.44
COL11A1-201ENST00000353414 Q5W150 140 aa6.07□□□□□ -1.44
COL11A1-201ENST00000353414 Q5XG85 94 aa6.06□□□□□ -1.44
COL11A1-201ENST00000353414 BOD1L1Q8NFC6 3051 aa6.05□□□□□ -1.44
COL11A1-201ENST00000353414 CYSTM1Q9H1C7 97 aa6.05□□□□□ -1.44
COL11A1-201ENST00000353414 LCE6AA0A183 80 aa6.05□□□□□ -1.44
COL11A1-201ENST00000353414 CFAP46Q8IYW2 2715 aa6.05□□□□□ -1.44
COL11A1-201ENST00000353414 ASPMQ8IZT6 3477 aa6.05□□□□□ -1.44
COL11A1-201ENST00000353414 FLNBO75369 2602 aaKnown RBP6.05□□□□□ -1.44
COL11A1-201ENST00000353414 SPATA8Q6RVD6 105 aa6.05□□□□□ -1.44
COL11A1-201ENST00000353414 PLAC8Q9NZF1 115 aa6.04□□□□□ -1.44
COL11A1-201ENST00000353414 Q5VV11 94 aa6.04□□□□□ -1.44
COL11A1-201ENST00000353414 FRYQ5TBA9 3013 aa6.04□□□□□ -1.44
COL11A1-201ENST00000353414 Q8NDZ9 215 aa6.04□□□□□ -1.44
COL11A1-201ENST00000353414 ROMO1P60602 79 aa6.03□□□□□ -1.44
COL11A1-201ENST00000353414 LINC01558Q9Y6Z2 57 aa6.03□□□□□ -1.44
COL11A1-201ENST00000353414 MMP24-AS1A0A0U1RRL7 71 aa6.02□□□□□ -1.45
COL11A1-201ENST00000353414 FP248Q71RG6 208 aaPredicted RBP6.02□□□□□ -1.45
COL11A1-201ENST00000353414 ITPR3Q14573 2671 aa6.02□□□□□ -1.45
COL11A1-201ENST00000353414 AKAP13Q12802 2813 aa6.02□□□□□ -1.45
COL11A1-201ENST00000353414 KRTAP1-5Q9BYS1 174 aa6.02□□□□□ -1.45
COL11A1-201ENST00000353414 ATRQ13535 2644 aa6□□□□□ -1.45
COL11A1-201ENST00000353414 TRANK1O15050 2925 aa6□□□□□ -1.45
COL11A1-201ENST00000353414 FLNAP21333 2647 aaKnown RBP5.99□□□□□ -1.45
COL11A1-201ENST00000353414 CENPEQ02224 2701 aa5.99□□□□□ -1.45
COL11A1-201ENST00000353414 MAP1AP78559 2803 aaPredicted RBP5.99□□□□□ -1.45
COL11A1-201ENST00000353414 BAHCC1Q9P281 2608 aa5.98□□□□□ -1.45
COL11A1-201ENST00000353414 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
COL11A1-201ENST00000353414 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
COL11A1-201ENST00000353414 TNRC18O15417 2968 aaPredicted RBP5.95□□□□□ -1.46
COL11A1-201ENST00000353414 RPL37P61927 97 aaKnown RBP5.94□□□□□ -1.46
COL11A1-201ENST00000353414 HELZ2Q9BYK8 2649 aaKnown RBP5.94□□□□□ -1.46
COL11A1-201ENST00000353414 MAST4O15021 2626 aa5.93□□□□□ -1.46
COL11A1-201ENST00000353414 DSPP15924 2871 aaKnown RBP5.93□□□□□ -1.46
COL11A1-201ENST00000353414 CRYBG3Q68DQ2 2970 aa5.93□□□□□ -1.46
COL11A1-201ENST00000353414 PANO1I0J062 215 aa5.92□□□□□ -1.46
COL11A1-201ENST00000353414 KALRNO60229 2985 aa5.92□□□□□ -1.46
COL11A1-201ENST00000353414 ATMQ13315 3056 aa5.91□□□□□ -1.46
COL11A1-201ENST00000353414 LRBAP50851 2863 aa5.91□□□□□ -1.46
COL11A1-201ENST00000353414 CHD6Q8TD26 2715 aa5.91□□□□□ -1.46
COL11A1-201ENST00000353414 COL12A1Q99715 3063 aa5.91□□□□□ -1.46
COL11A1-201ENST00000353414 TEX15Q9BXT5 2789 aa5.91□□□□□ -1.46
COL11A1-201ENST00000353414 ADGRG4Q8IZF6 3080 aa5.9□□□□□ -1.46
COL11A1-201ENST00000353414 OXTP01178 125 aa5.9□□□□□ -1.47
COL11A1-201ENST00000353414 A0A087X002 238 aa5.89□□□□□ -1.47
COL11A1-201ENST00000353414 DCHS1Q96JQ0 3298 aa5.88□□□□□ -1.47
COL11A1-201ENST00000353414 KRTAP26-1Q6PEX3 210 aa5.88□□□□□ -1.47
COL11A1-201ENST00000353414 LOC400499M0QZD8 3231 aa5.88□□□□□ -1.47
COL11A1-201ENST00000353414 Q6ZR54 194 aa5.87□□□□□ -1.47
COL11A1-201ENST00000353414 LAMA5O15230 3695 aa5.87□□□□□ -1.47
COL11A1-201ENST00000353414 LINC00472Q9H8W2 130 aa5.87□□□□□ -1.47
COL11A1-201ENST00000353414 DMXL2Q8TDJ6 3036 aa5.86□□□□□ -1.47
COL11A1-201ENST00000353414 ASH1LQ9NR48 2969 aaKnown RBP5.85□□□□□ -1.47
COL11A1-201ENST00000353414 TEP1Q99973 2627 aaKnown RBP5.85□□□□□ -1.47
COL11A1-201ENST00000353414 A8MU10 97 aa5.82□□□□□ -1.48
COL11A1-201ENST00000353414 NDUFAF8A1L188 74 aa5.82□□□□□ -1.48
COL11A1-201ENST00000353414 NBPF19A0A087WUL8 3843 aa5.81□□□□□ -1.48
COL11A1-201ENST00000353414 NOTCH2NLQ7Z3S9 236 aa5.81□□□□□ -1.48
COL11A1-201ENST00000353414 DMXL1Q9Y485 3027 aa5.81□□□□□ -1.48
COL11A1-201ENST00000353414 NBEAL1Q6ZS30 2694 aa5.81□□□□□ -1.48
COL11A1-201ENST00000353414 SPRR1AP35321 89 aa5.8□□□□□ -1.48
COL11A1-201ENST00000353414 A8MUU9 505 aa5.8□□□□□ -1.48
COL11A1-201ENST00000353414 DMDP11532 3685 aa5.8□□□□□ -1.48
COL11A1-201ENST00000353414 DMBT1Q9UGM3 2413 aaPredicted RBP5.79□□□□□ -1.48
COL11A1-201ENST00000353414 A0A1B0GVY2 172 aa5.79□□□□□ -1.48
COL11A1-201ENST00000353414 ZFHX4Q86UP3 3567 aa5.78□□□□□ -1.48
COL11A1-201ENST00000353414 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
COL11A1-201ENST00000353414 STAB1Q9NY15 2570 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms