RNA–Protein interactions for RNA: ENST00000343225.4

SLC12A2-202, Transcript of solute carrier family 12 member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC12A2, Length 5,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A2-202ENST00000343225 SEC61BP60468 96 aaKnown RBP15.07■□□□□ 0
SLC12A2-202ENST00000343225 HELZ2Q9BYK8 2649 aaKnown RBP15.05■□□□□ 0
SLC12A2-202ENST00000343225 BPTFQ12830 3046 aa15.05■□□□□ -0
SLC12A2-202ENST00000343225 KRTAP4-16G5E9R7 235 aaPredicted RBP15.01□□□□□ -0.01
SLC12A2-202ENST00000343225 DNAH12Q6ZR08 3092 aa15.01□□□□□ -0.01
SLC12A2-202ENST00000343225 LCE6AA0A183 80 aa15□□□□□ -0.01
SLC12A2-202ENST00000343225 KRTAP10-1P60331 282 aa14.99□□□□□ -0.01
SLC12A2-202ENST00000343225 Q5VSD8 79 aa14.97□□□□□ -0.01
SLC12A2-202ENST00000343225 Q6ZR54 194 aa14.97□□□□□ -0.01
SLC12A2-202ENST00000343225 MAST4O15021 2626 aa14.95□□□□□ -0.02
SLC12A2-202ENST00000343225 R4GN34 69 aa14.94□□□□□ -0.02
SLC12A2-202ENST00000343225 H3BS24 57 aa14.94□□□□□ -0.02
SLC12A2-202ENST00000343225 KRTAP10-2P60368 255 aa14.91□□□□□ -0.02
SLC12A2-202ENST00000343225 ASB16-AS1Q495Z4 193 aa14.87□□□□□ -0.03
SLC12A2-202ENST00000343225 KRTAP29-1A8MX34 341 aaPredicted RBP14.86□□□□□ -0.03
SLC12A2-202ENST00000343225 RPL37P61927 97 aaKnown RBP14.85□□□□□ -0.03
SLC12A2-202ENST00000343225 CFAP46Q8IYW2 2715 aa14.8□□□□□ -0.04
SLC12A2-202ENST00000343225 H1FX-AS1Q4G0G2 97 aa14.79□□□□□ -0.04
SLC12A2-202ENST00000343225 ROMO1P60602 79 aa14.76□□□□□ -0.05
SLC12A2-202ENST00000343225 CHD7Q9P2D1 2997 aa14.75□□□□□ -0.05
SLC12A2-202ENST00000343225 A0A0A0MQY5 61 aa14.74□□□□□ -0.05
SLC12A2-202ENST00000343225 PANO1I0J062 215 aa14.74□□□□□ -0.05
SLC12A2-202ENST00000343225 RPS29P62273 56 aaKnown RBP14.69□□□□□ -0.06
SLC12A2-202ENST00000343225 M0QZ58 72 aa14.64□□□□□ -0.07
SLC12A2-202ENST00000343225 CHD9Q3L8U1 2897 aa14.62□□□□□ -0.07
SLC12A2-202ENST00000343225 A0A087X002 238 aa14.61□□□□□ -0.07
SLC12A2-202ENST00000343225 STAB1Q9NY15 2570 aa14.54□□□□□ -0.08
SLC12A2-202ENST00000343225 SPATA8Q6RVD6 105 aa14.52□□□□□ -0.08
SLC12A2-202ENST00000343225 Q6ZRN7 208 aaPredicted RBP14.52□□□□□ -0.09
SLC12A2-202ENST00000343225 ADM2Q7Z4H4 148 aa14.5□□□□□ -0.09
SLC12A2-202ENST00000343225 CEP350Q5VT06 3117 aa14.5□□□□□ -0.09
SLC12A2-202ENST00000343225 NOTCH2NLQ7Z3S9 236 aa14.43□□□□□ -0.1
SLC12A2-202ENST00000343225 CENPEQ02224 2701 aa14.42□□□□□ -0.1
SLC12A2-202ENST00000343225 PLAC4Q8WY50 150 aa14.41□□□□□ -0.1
SLC12A2-202ENST00000343225 C5orf42Q9H799 3197 aa14.41□□□□□ -0.1
SLC12A2-202ENST00000343225 KRTAP11-1Q8IUC1 163 aa14.4□□□□□ -0.1
SLC12A2-202ENST00000343225 A6NN06 94 aa14.4□□□□□ -0.1
SLC12A2-202ENST00000343225 CHD6Q8TD26 2715 aa14.4□□□□□ -0.1
SLC12A2-202ENST00000343225 ZNF292O60281 2723 aa14.4□□□□□ -0.1
SLC12A2-202ENST00000343225 NBEAL1Q6ZS30 2694 aa14.39□□□□□ -0.11
SLC12A2-202ENST00000343225 KRTAP7-1Q8IUC3 87 aa14.37□□□□□ -0.11
SLC12A2-202ENST00000343225 KRTAP13-1Q8IUC0 172 aa14.35□□□□□ -0.11
SLC12A2-202ENST00000343225 TEX15Q9BXT5 2789 aa14.34□□□□□ -0.11
SLC12A2-202ENST00000343225 AKAP13Q12802 2813 aa14.32□□□□□ -0.12
SLC12A2-202ENST00000343225 TRANK1O15050 2925 aa14.32□□□□□ -0.12
SLC12A2-202ENST00000343225 GCN1Q92616 2671 aaKnown RBP14.27□□□□□ -0.13
SLC12A2-202ENST00000343225 TEP1Q99973 2627 aaKnown RBP14.25□□□□□ -0.13
SLC12A2-202ENST00000343225 UNC79Q9P2D8 2635 aa14.23□□□□□ -0.13
SLC12A2-202ENST00000343225 KRTAP13-2Q52LG2 175 aa14.22□□□□□ -0.13
SLC12A2-202ENST00000343225 KRTAP25-1Q3LHN0 102 aa14.22□□□□□ -0.13
SLC12A2-202ENST00000343225 COL6A5A8TX70 2615 aa14.21□□□□□ -0.14
SLC12A2-202ENST00000343225 MGAQ8IWI9 3026 aa14.18□□□□□ -0.14
SLC12A2-202ENST00000343225 HTTP42858 3142 aa14.17□□□□□ -0.14
SLC12A2-202ENST00000343225 UTRNP46939 3433 aa14.15□□□□□ -0.14
SLC12A2-202ENST00000343225 A8MUU9 505 aa14.09□□□□□ -0.15
SLC12A2-202ENST00000343225 FLG2Q5D862 2391 aaPredicted RBP14.08□□□□□ -0.16
SLC12A2-202ENST00000343225 DMBT1Q9UGM3 2413 aaPredicted RBP14.06□□□□□ -0.16
SLC12A2-202ENST00000343225 KRTAP16-1A8MUX0 517 aa14.05□□□□□ -0.16
SLC12A2-202ENST00000343225 SETXQ7Z333 2677 aaKnown RBP14.03□□□□□ -0.16
SLC12A2-202ENST00000343225 NOTCH1P46531 2555 aa14.03□□□□□ -0.16
SLC12A2-202ENST00000343225 KRTAP21-3Q3LHN1 58 aa14.03□□□□□ -0.16
SLC12A2-202ENST00000343225 IGSF10Q6WRI0 2623 aa14.02□□□□□ -0.16
SLC12A2-202ENST00000343225 A8MU10 97 aa13.97□□□□□ -0.17
SLC12A2-202ENST00000343225 CFAP54Q96N23 3096 aa13.93□□□□□ -0.18
SLC12A2-202ENST00000343225 NBEAL2Q6ZNJ1 2754 aa13.9□□□□□ -0.19
SLC12A2-202ENST00000343225 NSD1Q96L73 2696 aaPredicted RBP13.89□□□□□ -0.19
SLC12A2-202ENST00000343225 C20orf166-AS1Q96NR2 134 aa13.88□□□□□ -0.19
SLC12A2-202ENST00000343225 RANBP2P49792 3224 aaKnown RBP13.86□□□□□ -0.19
SLC12A2-202ENST00000343225 KMT2BQ9UMN6 2715 aaPredicted RBP13.82□□□□□ -0.2
SLC12A2-202ENST00000343225 ITPR2Q14571 2701 aa13.78□□□□□ -0.2
SLC12A2-202ENST00000343225 BAHCC1Q9P281 2608 aa13.77□□□□□ -0.21
SLC12A2-202ENST00000343225 UBR5O95071 2799 aaPredicted RBP13.77□□□□□ -0.21
SLC12A2-202ENST00000343225 DSPP15924 2871 aaKnown RBP13.74□□□□□ -0.21
SLC12A2-202ENST00000343225 PCNTO95613 3336 aa13.72□□□□□ -0.21
SLC12A2-202ENST00000343225 A0A0C4DFX4 3053 aa13.72□□□□□ -0.21
SLC12A2-202ENST00000343225 STAB2Q8WWQ8 2551 aa13.72□□□□□ -0.21
SLC12A2-202ENST00000343225 MAP1AP78559 2803 aaPredicted RBP13.71□□□□□ -0.22
SLC12A2-202ENST00000343225 NDUFAF8A1L188 74 aa13.68□□□□□ -0.22
SLC12A2-202ENST00000343225 TNP1P09430 55 aa13.67□□□□□ -0.22
SLC12A2-202ENST00000343225 WDFY4Q6ZS81 3184 aa13.63□□□□□ -0.23
SLC12A2-202ENST00000343225 MKI67P46013 3256 aaKnown RBP13.58□□□□□ -0.24
SLC12A2-202ENST00000343225 KRTAP1-4P0C5Y4 121 aa13.56□□□□□ -0.24
SLC12A2-202ENST00000343225 ITPR1Q14643 2758 aa13.54□□□□□ -0.24
SLC12A2-202ENST00000343225 LAMA3Q16787 3333 aa13.54□□□□□ -0.24
SLC12A2-202ENST00000343225 FRYQ5TBA9 3013 aa13.47□□□□□ -0.25
SLC12A2-202ENST00000343225 XP32Q5T750 250 aa13.47□□□□□ -0.25
SLC12A2-202ENST00000343225 PP632Q6XCG6 107 aa13.45□□□□□ -0.26
SLC12A2-202ENST00000343225 TRIOO75962 3097 aa13.44□□□□□ -0.26
SLC12A2-202ENST00000343225 PRUNE2Q8WUY3 3088 aa13.41□□□□□ -0.26
SLC12A2-202ENST00000343225 LAMA2P24043 3122 aaKnown RBP13.38□□□□□ -0.27
SLC12A2-202ENST00000343225 TPRXLQ17RH7 258 aa13.31□□□□□ -0.28
SLC12A2-202ENST00000343225 C10orf95Q9H7T3 257 aa13.24□□□□□ -0.29
SLC12A2-202ENST00000343225 APCP25054 2843 aa13.24□□□□□ -0.29
SLC12A2-202ENST00000343225 UTP20O75691 2785 aaKnown RBP13.24□□□□□ -0.29
SLC12A2-202ENST00000343225 FLNCQ14315 2725 aa13.24□□□□□ -0.29
SLC12A2-202ENST00000343225 HIVEP1P15822 2718 aa13.24□□□□□ -0.29
SLC12A2-202ENST00000343225 VPS13AQ96RL7 3174 aa13.22□□□□□ -0.29
SLC12A2-202ENST00000343225 H0YAA0 97 aa13.19□□□□□ -0.3
SLC12A2-202ENST00000343225 KALRNO60229 2985 aa13.15□□□□□ -0.3
SLC12A2-202ENST00000343225 BRCA2P51587 3418 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms