RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 VPS25Q9BRG1 176 aa7.65□□□□□ -1.18
HLA-DQA1-201ENST00000343139 LST1O00453 97 aa7.64□□□□□ -1.19
HLA-DQA1-201ENST00000343139 SLC25A20O43772 301 aa7.63□□□□□ -1.19
HLA-DQA1-201ENST00000343139 SMCPP49901 116 aaPredicted RBP7.63□□□□□ -1.19
HLA-DQA1-201ENST00000343139 ETDBQ3ZM63 59 aa7.63□□□□□ -1.19
HLA-DQA1-201ENST00000343139 TEN1Q86WV5 123 aa7.63□□□□□ -1.19
HLA-DQA1-201ENST00000343139 H3BT86 120 aa7.63□□□□□ -1.19
HLA-DQA1-201ENST00000343139 GAGE2AQ6NT46 116 aa7.63□□□□□ -1.19
HLA-DQA1-201ENST00000343139 C3orf22Q8N5N4 141 aa7.63□□□□□ -1.19
HLA-DQA1-201ENST00000343139 LINC00304Q8N9R0 145 aa7.63□□□□□ -1.19
HLA-DQA1-201ENST00000343139 C9JAW5 83 aa7.62□□□□□ -1.19
HLA-DQA1-201ENST00000343139 SPAG11AQ6PDA7 123 aa7.62□□□□□ -1.19
HLA-DQA1-201ENST00000343139 SPRR1BP22528 89 aa7.61□□□□□ -1.19
HLA-DQA1-201ENST00000343139 MTURNQ8N3F0 131 aa7.61□□□□□ -1.19
HLA-DQA1-201ENST00000343139 SMIM11BQ8TCY0 68 aa7.61□□□□□ -1.19
HLA-DQA1-201ENST00000343139 TRACP01848 142 aa7.6□□□□□ -1.19
HLA-DQA1-201ENST00000343139 ANKRD29Q8N6D5 301 aa7.6□□□□□ -1.19
HLA-DQA1-201ENST00000343139 PPDPFLQ8WWR9 84 aa7.6□□□□□ -1.19
HLA-DQA1-201ENST00000343139 SSBP3-AS1Q7Z2R9 100 aa7.59□□□□□ -1.19
HLA-DQA1-201ENST00000343139 H0YGX0 51 aa7.58□□□□□ -1.2
HLA-DQA1-201ENST00000343139 ST20-AS1Q8NBB2 130 aa7.58□□□□□ -1.2
HLA-DQA1-201ENST00000343139 CLEC2BQ92478 149 aa7.58□□□□□ -1.2
HLA-DQA1-201ENST00000343139 UBR4Q5T4S7 5183 aa7.58□□□□□ -1.2
HLA-DQA1-201ENST00000343139 Q8NBF4 154 aa7.55□□□□□ -1.2
HLA-DQA1-201ENST00000343139 LRP2P98164 4655 aa7.55□□□□□ -1.2
HLA-DQA1-201ENST00000343139 IGLV5-48A0A075B6I7 105 aa7.54□□□□□ -1.2
HLA-DQA1-201ENST00000343139 TEX49A0A1B0GTD5 131 aa7.54□□□□□ -1.2
HLA-DQA1-201ENST00000343139 SPINK1P00995 79 aa7.54□□□□□ -1.2
HLA-DQA1-201ENST00000343139 SCGB1A1P11684 91 aa7.54□□□□□ -1.2
HLA-DQA1-201ENST00000343139 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
HLA-DQA1-201ENST00000343139 C4orf48Q5BLP8 95 aa7.54□□□□□ -1.2
HLA-DQA1-201ENST00000343139 IGLV9-49A0A0B4J1Y8 123 aa7.54□□□□□ -1.2
HLA-DQA1-201ENST00000343139 A0A1B0GX51 115 aa7.54□□□□□ -1.2
HLA-DQA1-201ENST00000343139 MOBPQ13875 183 aa7.54□□□□□ -1.2
HLA-DQA1-201ENST00000343139 LINC00575Q6W349 94 aa7.53□□□□□ -1.2
HLA-DQA1-201ENST00000343139 LAMTOR3Q9UHA4 124 aa7.53□□□□□ -1.2
HLA-DQA1-201ENST00000343139 LINC01547P58512 204 aaPredicted RBP7.51□□□□□ -1.21
HLA-DQA1-201ENST00000343139 DNAL4O96015 105 aa7.5□□□□□ -1.21
HLA-DQA1-201ENST00000343139 PRR4Q16378 134 aa7.5□□□□□ -1.21
HLA-DQA1-201ENST00000343139 FAM218AQ96MZ4 157 aa7.5□□□□□ -1.21
HLA-DQA1-201ENST00000343139 hADV29S1A0JD25 119 aa7.5□□□□□ -1.21
HLA-DQA1-201ENST00000343139 C9orf153Q5TBE3 101 aa7.5□□□□□ -1.21
HLA-DQA1-201ENST00000343139 SMIM29Q86T20 159 aa7.49□□□□□ -1.21
HLA-DQA1-201ENST00000343139 DEFB105AQ8NG35 78 aa7.48□□□□□ -1.21
HLA-DQA1-201ENST00000343139 SNCGO76070 127 aa7.47□□□□□ -1.21
HLA-DQA1-201ENST00000343139 Q8N377 158 aa7.47□□□□□ -1.21
HLA-DQA1-201ENST00000343139 FAM240AA0A1B0GVK7 77 aa7.46□□□□□ -1.21
HLA-DQA1-201ENST00000343139 BAALC-AS2P0C853 105 aa7.46□□□□□ -1.21
HLA-DQA1-201ENST00000343139 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.46□□□□□ -1.21
HLA-DQA1-201ENST00000343139 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.21
HLA-DQA1-201ENST00000343139 Q6ZQY7 126 aa7.46□□□□□ -1.22
HLA-DQA1-201ENST00000343139 CD164Q04900 197 aa7.45□□□□□ -1.22
HLA-DQA1-201ENST00000343139 LPAP08519 4548 aa7.45□□□□□ -1.22
HLA-DQA1-201ENST00000343139 SIGMAR1Q99720 223 aa7.44□□□□□ -1.22
HLA-DQA1-201ENST00000343139 RETNLBQ9BQ08 111 aa7.44□□□□□ -1.22
HLA-DQA1-201ENST00000343139 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
HLA-DQA1-201ENST00000343139 CDIP1Q9H305 208 aa7.43□□□□□ -1.22
HLA-DQA1-201ENST00000343139 ORMDL1Q9P0S3 153 aa7.43□□□□□ -1.22
HLA-DQA1-201ENST00000343139 H3BQ85 93 aa7.42□□□□□ -1.22
HLA-DQA1-201ENST00000343139 ACYP1P07311 99 aa7.42□□□□□ -1.22
HLA-DQA1-201ENST00000343139 IGLV7-46A0A075B6I9 117 aa7.42□□□□□ -1.22
HLA-DQA1-201ENST00000343139 LIMD2Q9BT23 127 aa7.41□□□□□ -1.22
HLA-DQA1-201ENST00000343139 IGLV8-61A0A075B6I0 122 aa7.4□□□□□ -1.22
HLA-DQA1-201ENST00000343139 F8WEM9 126 aa7.4□□□□□ -1.22
HLA-DQA1-201ENST00000343139 GHRHP01286 108 aa7.4□□□□□ -1.22
HLA-DQA1-201ENST00000343139 OBSCN-AS1Q96MR7 158 aa7.4□□□□□ -1.22
HLA-DQA1-201ENST00000343139 A0A1B0GV72 72 aa7.39□□□□□ -1.23
HLA-DQA1-201ENST00000343139 TMEM256-PLSCR3K7ERE1 68 aa7.39□□□□□ -1.23
HLA-DQA1-201ENST00000343139 Q5XG85 94 aa7.39□□□□□ -1.23
HLA-DQA1-201ENST00000343139 Q6JHZ5 121 aa7.38□□□□□ -1.23
HLA-DQA1-201ENST00000343139 JMJD7-PLA2G4BH0Y9G9 81 aa7.37□□□□□ -1.23
HLA-DQA1-201ENST00000343139 RNF213Q63HN8 5207 aa7.34□□□□□ -1.23
HLA-DQA1-201ENST00000343139 HRCT1Q6UXD1 115 aa7.33□□□□□ -1.24
HLA-DQA1-201ENST00000343139 KRTAP13-3Q3SY46 172 aa7.33□□□□□ -1.24
HLA-DQA1-201ENST00000343139 MT-ATP8P03928 68 aa7.31□□□□□ -1.24
HLA-DQA1-201ENST00000343139 Q6Q795 121 aa7.31□□□□□ -1.24
HLA-DQA1-201ENST00000343139 IGFL1Q6UW32 110 aa7.31□□□□□ -1.24
HLA-DQA1-201ENST00000343139 NDUFV3P56181 108 aaKnown RBP7.3□□□□□ -1.24
HLA-DQA1-201ENST00000343139 A0A0G2JQZ4 141 aa7.29□□□□□ -1.24
HLA-DQA1-201ENST00000343139 C14orf132Q9NPU4 83 aa7.29□□□□□ -1.24
HLA-DQA1-201ENST00000343139 ASB16-AS1Q495Z4 193 aa7.29□□□□□ -1.24
HLA-DQA1-201ENST00000343139 LINC00643Q86TS7 51 aa7.29□□□□□ -1.24
HLA-DQA1-201ENST00000343139 PDE6GP18545 87 aa7.28□□□□□ -1.24
HLA-DQA1-201ENST00000343139 LOC110117498A0A087WWA1 95 aa7.27□□□□□ -1.25
HLA-DQA1-201ENST00000343139 TRBV7-7A0A0K0K1E9 115 aa7.27□□□□□ -1.25
HLA-DQA1-201ENST00000343139 CCKP06307 115 aa7.27□□□□□ -1.25
HLA-DQA1-201ENST00000343139 C1orf195Q5TG92 126 aa7.26□□□□□ -1.25
HLA-DQA1-201ENST00000343139 IMUPQ9GZP8 106 aa7.26□□□□□ -1.25
HLA-DQA1-201ENST00000343139 RBM3P98179 157 aaKnown RBP7.25□□□□□ -1.25
HLA-DQA1-201ENST00000343139 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
HLA-DQA1-201ENST00000343139 MUC2Q02817 5179 aa7.23□□□□□ -1.25
HLA-DQA1-201ENST00000343139 Q6ZQT0 140 aa7.22□□□□□ -1.25
HLA-DQA1-201ENST00000343139 DSCR8Q96T75 97 aa7.22□□□□□ -1.25
HLA-DQA1-201ENST00000343139 XP32Q5T750 250 aa7.21□□□□□ -1.25
HLA-DQA1-201ENST00000343139 SS18L2Q9UHA2 77 aa7.21□□□□□ -1.25
HLA-DQA1-201ENST00000343139 TRBV7-4A0A0J9YYF1 115 aa7.2□□□□□ -1.26
HLA-DQA1-201ENST00000343139 ATP5EP2Q5VTU8 51 aa7.2□□□□□ -1.26
HLA-DQA1-201ENST00000343139 LINC00846Q9NV44 126 aa7.2□□□□□ -1.26
HLA-DQA1-201ENST00000343139 SEC61BP60468 96 aaKnown RBP7.16□□□□□ -1.26
HLA-DQA1-201ENST00000343139 UBL5Q9BZL1 73 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms