RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 KLKP1Q107X0 134 aa10.55□□□□□ -0.72
RDX-201ENST00000343115 NBDYA0A0U1RRE5 68 aa10.54□□□□□ -0.72
RDX-201ENST00000343115 MOBPQ13875 183 aa10.54□□□□□ -0.72
RDX-201ENST00000343115 C1orf64Q8NEQ6 169 aa10.54□□□□□ -0.72
RDX-201ENST00000343115 RETNLBQ9BQ08 111 aa10.54□□□□□ -0.72
RDX-201ENST00000343115 SVIPQ8NHG7 77 aa10.53□□□□□ -0.72
RDX-201ENST00000343115 FBN1P35555 2871 aaKnown RBP10.52□□□□□ -0.73
RDX-201ENST00000343115 TLX1NBP0CAT3 122 aa10.5□□□□□ -0.73
RDX-201ENST00000343115 A0A1B0GW54 56 aa10.5□□□□□ -0.73
RDX-201ENST00000343115 A6NED7 52 aa10.5□□□□□ -0.73
RDX-201ENST00000343115 TENM3Q9P273 2699 aa10.48□□□□□ -0.73
RDX-201ENST00000343115 C1orf134Q5TEV5 83 aa10.48□□□□□ -0.73
RDX-201ENST00000343115 PRR15LQ9BU68 103 aa10.47□□□□□ -0.73
RDX-201ENST00000343115 hDV103S1A0JD37 113 aa10.46□□□□□ -0.74
RDX-201ENST00000343115 WIPF1O43516 503 aa10.46□□□□□ -0.74
RDX-201ENST00000343115 IGLV5-48A0A075B6I7 105 aa10.46□□□□□ -0.74
RDX-201ENST00000343115 VPS13CQ709C8 3753 aa10.45□□□□□ -0.74
RDX-201ENST00000343115 V9GYY9 64 aa10.45□□□□□ -0.74
RDX-201ENST00000343115 ANAPC11Q9NYG5 84 aa10.44□□□□□ -0.74
RDX-201ENST00000343115 KRTAP26-1Q6PEX3 210 aa10.44□□□□□ -0.74
RDX-201ENST00000343115 PLA2G2DQ9UNK4 145 aa10.44□□□□□ -0.74
RDX-201ENST00000343115 RTL8CO15255 209 aa10.41□□□□□ -0.74
RDX-201ENST00000343115 C1orf195Q5TG92 126 aa10.41□□□□□ -0.74
RDX-201ENST00000343115 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
RDX-201ENST00000343115 PRO0628Q9UI54 55 aa10.38□□□□□ -0.75
RDX-201ENST00000343115 TRAV22A0A0B4J277 110 aa10.38□□□□□ -0.75
RDX-201ENST00000343115 OCR1Q9BZK8 76 aa10.37□□□□□ -0.75
RDX-201ENST00000343115 LINC00336Q6ZUF6 198 aa10.37□□□□□ -0.75
RDX-201ENST00000343115 A8MWP4 228 aa10.36□□□□□ -0.75
RDX-201ENST00000343115 DSCR10P59022 87 aa10.35□□□□□ -0.75
RDX-201ENST00000343115 PRR15Q8IV56 129 aa10.35□□□□□ -0.75
RDX-201ENST00000343115 PMAIP1Q13794 54 aa10.34□□□□□ -0.75
RDX-201ENST00000343115 APLNQ9ULZ1 77 aa10.34□□□□□ -0.75
RDX-201ENST00000343115 IGLV5-37A0A075B6J1 123 aa10.33□□□□□ -0.76
RDX-201ENST00000343115 KRTAP1-5Q9BYS1 174 aa10.33□□□□□ -0.76
RDX-201ENST00000343115 CNBPP62633 177 aaKnown RBP10.31□□□□□ -0.76
RDX-201ENST00000343115 SPAG11AQ6PDA7 123 aa10.3□□□□□ -0.76
RDX-201ENST00000343115 SPACA4Q8TDM5 124 aa10.29□□□□□ -0.76
RDX-201ENST00000343115 PKD1L1Q8TDX9 2849 aa10.29□□□□□ -0.76
RDX-201ENST00000343115 A8MUN3 132 aa10.29□□□□□ -0.76
RDX-201ENST00000343115 OXTP01178 125 aa10.28□□□□□ -0.76
RDX-201ENST00000343115 A0A087WTM6 91 aa10.28□□□□□ -0.76
RDX-201ENST00000343115 SPRR4Q96PI1 79 aa10.28□□□□□ -0.76
RDX-201ENST00000343115 SPRR1AP35321 89 aa10.27□□□□□ -0.76
RDX-201ENST00000343115 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
RDX-201ENST00000343115 IGKV2-30P06310 120 aa10.25□□□□□ -0.77
RDX-201ENST00000343115 PSORS1C2Q9UIG4 136 aa10.25□□□□□ -0.77
RDX-201ENST00000343115 TP53AIP1Q9HCN2 124 aa10.25□□□□□ -0.77
RDX-201ENST00000343115 SPINK1P00995 79 aa10.25□□□□□ -0.77
RDX-201ENST00000343115 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.24□□□□□ -0.77
RDX-201ENST00000343115 C8orf17Q9NRJ1 99 aa10.21□□□□□ -0.78
RDX-201ENST00000343115 H3BPC8 53 aa10.2□□□□□ -0.78
RDX-201ENST00000343115 SEC61GP60059 68 aa10.2□□□□□ -0.78
RDX-201ENST00000343115 ZNF861PO60384 105 aa10.2□□□□□ -0.78
RDX-201ENST00000343115 LIMD2Q9BT23 127 aa10.19□□□□□ -0.78
RDX-201ENST00000343115 MRPL34Q9BQ48 92 aaKnown RBP10.19□□□□□ -0.78
RDX-201ENST00000343115 FAM229BQ4G0N7 80 aa10.18□□□□□ -0.78
RDX-201ENST00000343115 Q5XG85 94 aa10.18□□□□□ -0.78
RDX-201ENST00000343115 COA5Q86WW8 74 aa10.17□□□□□ -0.78
RDX-201ENST00000343115 FP248Q71RG6 208 aaPredicted RBP10.15□□□□□ -0.78
RDX-201ENST00000343115 KRTAP4-16G5E9R7 235 aaPredicted RBP10.15□□□□□ -0.79
RDX-201ENST00000343115 A0A1B0GVX0 72 aa10.14□□□□□ -0.79
RDX-201ENST00000343115 ZNF469Q96JG9 3925 aaPredicted RBP10.14□□□□□ -0.79
RDX-201ENST00000343115 LINC00313P59037 77 aa10.13□□□□□ -0.79
RDX-201ENST00000343115 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
RDX-201ENST00000343115 TNP2Q05952 138 aa10.12□□□□□ -0.79
RDX-201ENST00000343115 TENM2Q9NT68 2774 aa10.11□□□□□ -0.79
RDX-201ENST00000343115 KRTAP7-1Q8IUC3 87 aa10.1□□□□□ -0.79
RDX-201ENST00000343115 PANO1I0J062 215 aa10.09□□□□□ -0.79
RDX-201ENST00000343115 WWC2-AS2Q96NR7 200 aa10.08□□□□□ -0.8
RDX-201ENST00000343115 IGLV7-43P04211 117 aa10.06□□□□□ -0.8
RDX-201ENST00000343115 ACYP2P14621 99 aa10.05□□□□□ -0.8
RDX-201ENST00000343115 TYMSOSQ8TAI1 123 aa10.05□□□□□ -0.8
RDX-201ENST00000343115 PLA2G1BP04054 148 aaKnown RBP10.05□□□□□ -0.8
RDX-201ENST00000343115 KRTAP11-1Q8IUC1 163 aa10.04□□□□□ -0.8
RDX-201ENST00000343115 LOC101927531A0A1B0GV80 90 aa10.02□□□□□ -0.8
RDX-201ENST00000343115 IGLV8-61A0A075B6I0 122 aa10.02□□□□□ -0.81
RDX-201ENST00000343115 C7orf65Q6ZTY9 151 aa10.02□□□□□ -0.81
RDX-201ENST00000343115 LINC00472Q9H8W2 130 aa10.01□□□□□ -0.81
RDX-201ENST00000343115 MMP24-AS1A0A0U1RRL7 71 aa10□□□□□ -0.81
RDX-201ENST00000343115 Q96NJ1 140 aa10□□□□□ -0.81
RDX-201ENST00000343115 A0A1B0GU69 56 aa9.99□□□□□ -0.81
RDX-201ENST00000343115 SSBP3-AS1Q7Z2R9 100 aa9.99□□□□□ -0.81
RDX-201ENST00000343115 SMR3BP02814 79 aaPredicted RBP9.98□□□□□ -0.81
RDX-201ENST00000343115 FAM229AH3BQW9 127 aa9.97□□□□□ -0.81
RDX-201ENST00000343115 PRR26Q8N8Z3 221 aa9.97□□□□□ -0.81
RDX-201ENST00000343115 ANK3Q12955 4377 aaKnown RBP9.96□□□□□ -0.81
RDX-201ENST00000343115 SPRR1BP22528 89 aa9.95□□□□□ -0.82
RDX-201ENST00000343115 TGP01266 2768 aa9.95□□□□□ -0.82
RDX-201ENST00000343115 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
RDX-201ENST00000343115 C8orf87E5RJ46 101 aa9.93□□□□□ -0.82
RDX-201ENST00000343115 CYP4F30PQ9H0H9 118 aa9.93□□□□□ -0.82
RDX-201ENST00000343115 Q1T7F1 81 aa9.89□□□□□ -0.83
RDX-201ENST00000343115 CD164Q04900 197 aa9.86□□□□□ -0.83
RDX-201ENST00000343115 PLAC8Q9NZF1 115 aa9.86□□□□□ -0.83
RDX-201ENST00000343115 IGLV7-46A0A075B6I9 117 aa9.85□□□□□ -0.83
RDX-201ENST00000343115 DMBT1Q9UGM3 2413 aaPredicted RBP9.84□□□□□ -0.83
RDX-201ENST00000343115 ATP11AUNQ6ZP68 121 aa9.84□□□□□ -0.83
RDX-201ENST00000343115 Q8N9P0 234 aaPredicted RBP9.84□□□□□ -0.83
RDX-201ENST00000343115 C9orf92A6NGG3 77 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms