RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 RPL37AP61513 92 aaKnown RBP6.05□□□□□ -1.44
HOXA1-201ENST00000343060 Q75L30 129 aa6.05□□□□□ -1.44
HOXA1-201ENST00000343060 NOTCH2Q04721 2471 aa6.04□□□□□ -1.44
HOXA1-201ENST00000343060 C16orf90A8MZG2 172 aa6.04□□□□□ -1.44
HOXA1-201ENST00000343060 LINC00472Q9H8W2 130 aa6.04□□□□□ -1.44
HOXA1-201ENST00000343060 CHKB-CPT1BH3BT56 60 aa6.03□□□□□ -1.44
HOXA1-201ENST00000343060 PRB2P02812 416 aaPredicted RBP6.03□□□□□ -1.44
HOXA1-201ENST00000343060 SPRR1BP22528 89 aa6.03□□□□□ -1.44
HOXA1-201ENST00000343060 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
HOXA1-201ENST00000343060 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
HOXA1-201ENST00000343060 PRLHP81277 87 aa6.02□□□□□ -1.45
HOXA1-201ENST00000343060 KTN1-AS1Q86SY8 53 aa6.01□□□□□ -1.45
HOXA1-201ENST00000343060 COA5Q86WW8 74 aa6.01□□□□□ -1.45
HOXA1-201ENST00000343060 C11orf45Q8TAV5 145 aa6.01□□□□□ -1.45
HOXA1-201ENST00000343060 ATP11AUNQ6ZP68 121 aa6□□□□□ -1.45
HOXA1-201ENST00000343060 TENM1Q9UKZ4 2725 aa6□□□□□ -1.45
HOXA1-201ENST00000343060 MMP24-AS1A0A0U1RRL7 71 aa6□□□□□ -1.45
HOXA1-201ENST00000343060 KRTAP10-11P60412 298 aa6□□□□□ -1.45
HOXA1-201ENST00000343060 LCA10Q71F78 164 aa6□□□□□ -1.45
HOXA1-201ENST00000343060 PKD1L1Q8TDX9 2849 aa6□□□□□ -1.45
HOXA1-201ENST00000343060 TRRAPQ9Y4A5 3859 aa5.99□□□□□ -1.45
HOXA1-201ENST00000343060 H0Y9J4 135 aa5.99□□□□□ -1.45
HOXA1-201ENST00000343060 PLAC8Q9NZF1 115 aa5.99□□□□□ -1.45
HOXA1-201ENST00000343060 ITPR2Q14571 2701 aa5.98□□□□□ -1.45
HOXA1-201ENST00000343060 ASB16-AS1Q495Z4 193 aa5.98□□□□□ -1.45
HOXA1-201ENST00000343060 FASNP49327 2511 aaKnown RBP5.98□□□□□ -1.45
HOXA1-201ENST00000343060 A0A096LNI7 61 aa5.98□□□□□ -1.45
HOXA1-201ENST00000343060 A6NN06 94 aa5.97□□□□□ -1.45
HOXA1-201ENST00000343060 ANK2Q01484 3957 aa5.97□□□□□ -1.45
HOXA1-201ENST00000343060 INAFM1C9JVW0 142 aa5.97□□□□□ -1.45
HOXA1-201ENST00000343060 TENM4Q6N022 2769 aa5.97□□□□□ -1.45
HOXA1-201ENST00000343060 CDC42SE1Q9NRR8 79 aa5.96□□□□□ -1.45
HOXA1-201ENST00000343060 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.45
HOXA1-201ENST00000343060 TENM3Q9P273 2699 aa5.96□□□□□ -1.46
HOXA1-201ENST00000343060 OXLD1Q5BKU9 147 aa5.95□□□□□ -1.46
HOXA1-201ENST00000343060 PHF5AQ7RTV0 110 aaKnown RBP5.95□□□□□ -1.46
HOXA1-201ENST00000343060 A6NED7 52 aa5.95□□□□□ -1.46
HOXA1-201ENST00000343060 NDUFS5O43920 106 aa5.95□□□□□ -1.46
HOXA1-201ENST00000343060 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
HOXA1-201ENST00000343060 F8P00451 2351 aa5.94□□□□□ -1.46
HOXA1-201ENST00000343060 Q6ZR54 194 aa5.94□□□□□ -1.46
HOXA1-201ENST00000343060 KRTAP11-1Q8IUC1 163 aa5.93□□□□□ -1.46
HOXA1-201ENST00000343060 DNAH3Q8TD57 4116 aa5.93□□□□□ -1.46
HOXA1-201ENST00000343060 MOBPQ13875 183 aa5.93□□□□□ -1.46
HOXA1-201ENST00000343060 TEP1Q99973 2627 aaKnown RBP5.93□□□□□ -1.46
HOXA1-201ENST00000343060 NSD1Q96L73 2696 aaPredicted RBP5.93□□□□□ -1.46
HOXA1-201ENST00000343060 SPTSSBQ8NFR3 76 aa5.92□□□□□ -1.46
HOXA1-201ENST00000343060 ATRQ13535 2644 aa5.92□□□□□ -1.46
HOXA1-201ENST00000343060 Q96NJ1 140 aa5.92□□□□□ -1.46
HOXA1-201ENST00000343060 RBM12B-AS1Q9P1G2 102 aa5.92□□□□□ -1.46
HOXA1-201ENST00000343060 IGKV2-24A0A0C4DH68 120 aa5.91□□□□□ -1.46
HOXA1-201ENST00000343060 CMYA5Q8N3K9 4069 aa5.9□□□□□ -1.46
HOXA1-201ENST00000343060 PCOTHQ58A44 107 aa5.89□□□□□ -1.47
HOXA1-201ENST00000343060 KRTAP13-1Q8IUC0 172 aa5.89□□□□□ -1.47
HOXA1-201ENST00000343060 C8orf17Q9NRJ1 99 aa5.88□□□□□ -1.47
HOXA1-201ENST00000343060 C7orf65Q6ZTY9 151 aa5.88□□□□□ -1.47
HOXA1-201ENST00000343060 HRES1P13985 223 aa5.87□□□□□ -1.47
HOXA1-201ENST00000343060 KRTAP1-5Q9BYS1 174 aa5.87□□□□□ -1.47
HOXA1-201ENST00000343060 OTOGQ6ZRI0 2925 aa5.87□□□□□ -1.47
HOXA1-201ENST00000343060 SPAG11AQ6PDA7 123 aa5.86□□□□□ -1.47
HOXA1-201ENST00000343060 FLNBO75369 2602 aaKnown RBP5.86□□□□□ -1.47
HOXA1-201ENST00000343060 DNAH10Q8IVF4 4471 aa5.86□□□□□ -1.47
HOXA1-201ENST00000343060 J3QKU1 62 aa5.86□□□□□ -1.47
HOXA1-201ENST00000343060 HELZ2Q9BYK8 2649 aaKnown RBP5.85□□□□□ -1.47
HOXA1-201ENST00000343060 CHTF8P0CG12 524 aa5.85□□□□□ -1.47
HOXA1-201ENST00000343060 SPINK7P58062 85 aa5.84□□□□□ -1.47
HOXA1-201ENST00000343060 C14orf177Q52M58 125 aa5.84□□□□□ -1.47
HOXA1-201ENST00000343060 A0A1B0GVX0 72 aa5.84□□□□□ -1.47
HOXA1-201ENST00000343060 HUWE1Q7Z6Z7 4374 aaKnown RBP5.83□□□□□ -1.48
HOXA1-201ENST00000343060 TENM2Q9NT68 2774 aa5.83□□□□□ -1.48
HOXA1-201ENST00000343060 LINC00483Q53H64 154 aa5.82□□□□□ -1.48
HOXA1-201ENST00000343060 MAST4O15021 2626 aa5.82□□□□□ -1.48
HOXA1-201ENST00000343060 MRPL34Q9BQ48 92 aaKnown RBP5.82□□□□□ -1.48
HOXA1-201ENST00000343060 DNAH9Q9NYC9 4486 aa5.8□□□□□ -1.48
HOXA1-201ENST00000343060 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
HOXA1-201ENST00000343060 KRTAP13-3Q3SY46 172 aa5.79□□□□□ -1.48
HOXA1-201ENST00000343060 ALMS1Q8TCU4 4167 aa5.79□□□□□ -1.48
HOXA1-201ENST00000343060 IGHV6-1A0A0B4J1U7 121 aa5.79□□□□□ -1.48
HOXA1-201ENST00000343060 LYSTQ99698 3801 aa5.78□□□□□ -1.48
HOXA1-201ENST00000343060 IGLV9-49A0A0B4J1Y8 123 aa5.78□□□□□ -1.48
HOXA1-201ENST00000343060 PANO1I0J062 215 aa5.76□□□□□ -1.49
HOXA1-201ENST00000343060 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
HOXA1-201ENST00000343060 A0A087X002 238 aa5.75□□□□□ -1.49
HOXA1-201ENST00000343060 CDK2AP2O75956 126 aa5.75□□□□□ -1.49
HOXA1-201ENST00000343060 NOTCH2NLQ7Z3S9 236 aa5.75□□□□□ -1.49
HOXA1-201ENST00000343060 MDFIQ99750 246 aa5.75□□□□□ -1.49
HOXA1-201ENST00000343060 PRR26Q8N8Z3 221 aa5.74□□□□□ -1.49
HOXA1-201ENST00000343060 ZNF706Q9Y5V0 76 aaPredicted RBP5.74□□□□□ -1.49
HOXA1-201ENST00000343060 DYNC2H1Q8NCM8 4307 aaKnown RBP5.74□□□□□ -1.49
HOXA1-201ENST00000343060 KRTAP24-1Q3LI83 254 aa5.73□□□□□ -1.49
HOXA1-201ENST00000343060 SPACA4Q8TDM5 124 aa5.73□□□□□ -1.49
HOXA1-201ENST00000343060 K7EIL1 84 aa5.72□□□□□ -1.49
HOXA1-201ENST00000343060 Q5W150 140 aa5.72□□□□□ -1.49
HOXA1-201ENST00000343060 ACYP2P14621 99 aa5.72□□□□□ -1.49
HOXA1-201ENST00000343060 DMAC1Q96GE9 116 aa5.72□□□□□ -1.49
HOXA1-201ENST00000343060 APLNQ9ULZ1 77 aa5.71□□□□□ -1.5
HOXA1-201ENST00000343060 HECTD1Q9ULT8 2610 aa5.7□□□□□ -1.5
HOXA1-201ENST00000343060 LINC00313P59037 77 aa5.7□□□□□ -1.5
HOXA1-201ENST00000343060 UBE2DNLQ8IWF7 75 aa5.7□□□□□ -1.5
HOXA1-201ENST00000343060 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms