RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 RPL37P61927 97 aaKnown RBP9.07□□□□□ -0.96
COL11A2-201ENST00000341947 Q5VV11 94 aa9.06□□□□□ -0.96
COL11A2-201ENST00000341947 DNAH12Q6ZR08 3092 aa9.06□□□□□ -0.96
COL11A2-201ENST00000341947 FLNBO75369 2602 aaKnown RBP9.05□□□□□ -0.96
COL11A2-201ENST00000341947 OXTP01178 125 aa9.05□□□□□ -0.96
COL11A2-201ENST00000341947 ROMO1P60602 79 aa9.03□□□□□ -0.96
COL11A2-201ENST00000341947 PLAC4Q8WY50 150 aa9.03□□□□□ -0.96
COL11A2-201ENST00000341947 Q5XG85 94 aa9.02□□□□□ -0.96
COL11A2-201ENST00000341947 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
COL11A2-201ENST00000341947 CYSTM1Q9H1C7 97 aa8.98□□□□□ -0.97
COL11A2-201ENST00000341947 ADM2Q7Z4H4 148 aa8.97□□□□□ -0.97
COL11A2-201ENST00000341947 FLNAP21333 2647 aaKnown RBP8.96□□□□□ -0.97
COL11A2-201ENST00000341947 Q6ZR54 194 aa8.96□□□□□ -0.98
COL11A2-201ENST00000341947 PANO1I0J062 215 aa8.9□□□□□ -0.98
COL11A2-201ENST00000341947 ITPR3Q14573 2671 aa8.9□□□□□ -0.99
COL11A2-201ENST00000341947 BPTFQ12830 3046 aa8.89□□□□□ -0.99
COL11A2-201ENST00000341947 KRTAP4-16G5E9R7 235 aaPredicted RBP8.86□□□□□ -0.99
COL11A2-201ENST00000341947 A0A087X002 238 aa8.86□□□□□ -0.99
COL11A2-201ENST00000341947 SPATA8Q6RVD6 105 aa8.86□□□□□ -0.99
COL11A2-201ENST00000341947 CEP350Q5VT06 3117 aa8.85□□□□□ -0.99
COL11A2-201ENST00000341947 ATRQ13535 2644 aa8.83□□□□□ -1
COL11A2-201ENST00000341947 HELZ2Q9BYK8 2649 aaKnown RBP8.82□□□□□ -1
COL11A2-201ENST00000341947 H3BS24 57 aa8.8□□□□□ -1
COL11A2-201ENST00000341947 MAST4O15021 2626 aa8.8□□□□□ -1
COL11A2-201ENST00000341947 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
COL11A2-201ENST00000341947 RPS29P62273 56 aaKnown RBP8.77□□□□□ -1.01
COL11A2-201ENST00000341947 C5orf42Q9H799 3197 aa8.74□□□□□ -1.01
COL11A2-201ENST00000341947 ASB16-AS1Q495Z4 193 aa8.73□□□□□ -1.01
COL11A2-201ENST00000341947 NOTCH2NLQ7Z3S9 236 aa8.71□□□□□ -1.02
COL11A2-201ENST00000341947 PCNTO95613 3336 aa8.69□□□□□ -1.02
COL11A2-201ENST00000341947 A8MUU9 505 aa8.68□□□□□ -1.02
COL11A2-201ENST00000341947 PRRC2CQ9Y520 2896 aaKnown RBP8.67□□□□□ -1.02
COL11A2-201ENST00000341947 CHD7Q9P2D1 2997 aa8.65□□□□□ -1.02
COL11A2-201ENST00000341947 Q6ZRN7 208 aaPredicted RBP8.65□□□□□ -1.03
COL11A2-201ENST00000341947 STAB1Q9NY15 2570 aa8.64□□□□□ -1.03
COL11A2-201ENST00000341947 KRTAP11-1Q8IUC1 163 aa8.64□□□□□ -1.03
COL11A2-201ENST00000341947 CFAP46Q8IYW2 2715 aa8.63□□□□□ -1.03
COL11A2-201ENST00000341947 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
COL11A2-201ENST00000341947 FLG2Q5D862 2391 aaPredicted RBP8.59□□□□□ -1.03
COL11A2-201ENST00000341947 A8MU10 97 aa8.56□□□□□ -1.04
COL11A2-201ENST00000341947 KRTAP13-2Q52LG2 175 aa8.56□□□□□ -1.04
COL11A2-201ENST00000341947 HTTP42858 3142 aa8.54□□□□□ -1.04
COL11A2-201ENST00000341947 KRTAP7-1Q8IUC3 87 aa8.51□□□□□ -1.05
COL11A2-201ENST00000341947 KRTAP25-1Q3LHN0 102 aa8.51□□□□□ -1.05
COL11A2-201ENST00000341947 NBEAL1Q6ZS30 2694 aa8.5□□□□□ -1.05
COL11A2-201ENST00000341947 RANBP2P49792 3224 aaKnown RBP8.49□□□□□ -1.05
COL11A2-201ENST00000341947 KRTAP21-3Q3LHN1 58 aa8.49□□□□□ -1.05
COL11A2-201ENST00000341947 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
COL11A2-201ENST00000341947 CHD9Q3L8U1 2897 aa8.47□□□□□ -1.05
COL11A2-201ENST00000341947 MKI67P46013 3256 aaKnown RBP8.47□□□□□ -1.05
COL11A2-201ENST00000341947 LAMA3Q16787 3333 aa8.46□□□□□ -1.06
COL11A2-201ENST00000341947 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
COL11A2-201ENST00000341947 TNP1P09430 55 aa8.44□□□□□ -1.06
COL11A2-201ENST00000341947 TEX15Q9BXT5 2789 aa8.43□□□□□ -1.06
COL11A2-201ENST00000341947 BRCA2P51587 3418 aa8.42□□□□□ -1.06
COL11A2-201ENST00000341947 KRTAP16-1A8MUX0 517 aa8.41□□□□□ -1.06
COL11A2-201ENST00000341947 A6NN06 94 aa8.4□□□□□ -1.06
COL11A2-201ENST00000341947 CHD6Q8TD26 2715 aa8.39□□□□□ -1.07
COL11A2-201ENST00000341947 TEP1Q99973 2627 aaKnown RBP8.38□□□□□ -1.07
COL11A2-201ENST00000341947 AKAP13Q12802 2813 aa8.35□□□□□ -1.07
COL11A2-201ENST00000341947 COL6A5A8TX70 2615 aa8.29□□□□□ -1.08
COL11A2-201ENST00000341947 UNC79Q9P2D8 2635 aa8.29□□□□□ -1.08
COL11A2-201ENST00000341947 CENPEQ02224 2701 aa8.28□□□□□ -1.08
COL11A2-201ENST00000341947 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
COL11A2-201ENST00000341947 GCN1Q92616 2671 aaKnown RBP8.27□□□□□ -1.09
COL11A2-201ENST00000341947 SETXQ7Z333 2677 aaKnown RBP8.26□□□□□ -1.09
COL11A2-201ENST00000341947 CFAP54Q96N23 3096 aa8.26□□□□□ -1.09
COL11A2-201ENST00000341947 TRANK1O15050 2925 aa8.25□□□□□ -1.09
COL11A2-201ENST00000341947 NDUFAF8A1L188 74 aa8.23□□□□□ -1.09
COL11A2-201ENST00000341947 PRUNE2Q8WUY3 3088 aa8.23□□□□□ -1.09
COL11A2-201ENST00000341947 MGAQ8IWI9 3026 aa8.21□□□□□ -1.09
COL11A2-201ENST00000341947 KRTAP10-8P60410 259 aa8.2□□□□□ -1.1
COL11A2-201ENST00000341947 UNC80Q8N2C7 3258 aa8.2□□□□□ -1.1
COL11A2-201ENST00000341947 XIRP2A4UGR9 3374 aa8.19□□□□□ -1.1
COL11A2-201ENST00000341947 STAB2Q8WWQ8 2551 aa8.18□□□□□ -1.1
COL11A2-201ENST00000341947 XP32Q5T750 250 aa8.18□□□□□ -1.1
COL11A2-201ENST00000341947 BAHCC1Q9P281 2608 aa8.17□□□□□ -1.1
COL11A2-201ENST00000341947 CDH23Q9H251 3354 aa8.17□□□□□ -1.1
COL11A2-201ENST00000341947 A0A1B0GVY2 172 aa8.16□□□□□ -1.1
COL11A2-201ENST00000341947 NOTCH1P46531 2555 aa8.15□□□□□ -1.1
COL11A2-201ENST00000341947 PP632Q6XCG6 107 aa8.15□□□□□ -1.1
COL11A2-201ENST00000341947 LAMA2P24043 3122 aaKnown RBP8.13□□□□□ -1.11
COL11A2-201ENST00000341947 WDFY4Q6ZS81 3184 aa8.13□□□□□ -1.11
COL11A2-201ENST00000341947 A0A0C4DFX4 3053 aa8.11□□□□□ -1.11
COL11A2-201ENST00000341947 ZNF292O60281 2723 aa8.1□□□□□ -1.11
COL11A2-201ENST00000341947 KRTAP1-4P0C5Y4 121 aa8.09□□□□□ -1.11
COL11A2-201ENST00000341947 NBEAL2Q6ZNJ1 2754 aa8.08□□□□□ -1.12
COL11A2-201ENST00000341947 CELSR3Q9NYQ7 3312 aa8.05□□□□□ -1.12
COL11A2-201ENST00000341947 TPRXLQ17RH7 258 aa8.04□□□□□ -1.12
COL11A2-201ENST00000341947 NSD1Q96L73 2696 aaPredicted RBP8.04□□□□□ -1.12
COL11A2-201ENST00000341947 TRIOO75962 3097 aa8.04□□□□□ -1.12
COL11A2-201ENST00000341947 IGSF10Q6WRI0 2623 aa8.03□□□□□ -1.12
COL11A2-201ENST00000341947 ITPR2Q14571 2701 aa8.02□□□□□ -1.12
COL11A2-201ENST00000341947 KRTAP10-10P60014 251 aa8.02□□□□□ -1.13
COL11A2-201ENST00000341947 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
COL11A2-201ENST00000341947 FREM2Q5SZK8 3169 aa7.98□□□□□ -1.13
COL11A2-201ENST00000341947 KMT2BQ9UMN6 2715 aaPredicted RBP7.97□□□□□ -1.13
COL11A2-201ENST00000341947 SZT2Q5T011 3432 aa7.97□□□□□ -1.13
COL11A2-201ENST00000341947 MAP1AP78559 2803 aaPredicted RBP7.96□□□□□ -1.13
COL11A2-201ENST00000341947 DSPP15924 2871 aaKnown RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms